KEGG   Choristoneura fumiferana (eastern spruce budworm): 141437940
Entry
141437940         CDS       T11020                                 
Symbol
Sf3b6
Name
(RefSeq) splicing factor 3b subunit 6
  KO
K12833  pre-mRNA branch site protein p14
Organism
cfum  Choristoneura fumiferana (eastern spruce budworm)
Pathway
cfum03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:cfum00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    141437940 (Sf3b6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:cfum03041]
    141437940 (Sf3b6)
Spliceosome [BR:cfum03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    141437940 (Sf3b6)
 Complex B
    141437940 (Sf3b6)
 Complex C
   U2 SnRNP specific factors
    141437940 (Sf3b6)
SSDB
Motif
Pfam: RRM_1 RRM_5
Other DBs
NCBI-GeneID: 141437940
NCBI-ProteinID: XP_073957642
LinkDB
Position
18:complement(12185195..12186092)
AA seq 126 aa
MALALQRRANVRLPPEVNRVLYIRNLPYKISAEEMYDIFGKYGAIRQIRVGNTPETRGTA
FVVYEDIFDAKNACDHLSGFNVCNRYLVVLYYRSNKAFKGMDIEKKQEELDTLKKKYGIS
SEELRK
NT seq 381 nt   +upstreamnt  +downstreamnt
atggctttggcacttcaacgacgggctaatgtacgtctgccacctgaagttaacagagtt
ttatatatcagaaacctaccatataagatatctgctgaggaaatgtatgatatatttggc
aaatatggtgcaataaggcaaattcgggtaggtaacacaccagaaacaagaggcacagca
tttgtggtatatgaagacatatttgatgctaagaatgcttgtgaccatctctcaggcttc
aatgtgtgtaacagatacttagttgttttatactatagatccaataaagccttcaaaggt
atggatattgagaagaagcaggaagaattggatactttaaaaaagaaatacggaatttca
tcagaagagctgcgtaaataa

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