Choristoneura fumiferana (eastern spruce budworm): 141439916
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Entry
141439916 CDS
T11020
Name
(RefSeq) katanin p60 ATPase-containing subunit A-like 2
KO
K07767
katanin p60 ATPase-containing subunit A1 [EC:
5.6.1.1
]
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cfum04812
]
141439916
Enzymes [BR:
cfum01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
141439916
Cytoskeleton proteins [BR:
cfum04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
141439916
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
AAA_16
RuvB_N
AAA_5
AAA_22
Sigma54_activat
LisH
AAA_33
AAA_14
nSTAND3
IstB_IS21
TIP49
AAA_28
nSTAND_NTPase5
AAA_18
Mg_chelatase
AAA_7
NPHP3_N
TsaE
PhoH
NACHT
RNA_helicase
AAA_30
AAA_11
Parvo_NS1
bpMoxR
Motif
Other DBs
NCBI-GeneID:
141439916
NCBI-ProteinID:
XP_073960475
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All DBs
Position
21:1736319..1782673
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AA seq
448 aa
AA seq
DB search
MSGVINRPMSQMRKMETKDSLFRARKRILRYLVHSFLKNEGLFHSAETLAEEAALTGEYE
VCDNIDLDIIMQDYTSYYLSRFNKPPQFLRPAAPAPRRPPTRHARPKPEPPPAKETLELE
LPDTFTITPLVKQESETIPEYIPAIERKPLSAFLGKASPEKKAFVEALYQDIIRPSGVSW
DDIKGLEAAKSLLMESVVYPVRYPEVFTGLLEPWRGVLLHGPPGTGKTLLARAVAAESRC
TFFNVAPSTIVTKWRGDSERIVKVLFEMASYYAPSIIFVDEVETLASERGGAGEHEASRR
LKAQLLTELDGVSGRGGIVFLLANSNMPWEIDPAMLRRLEKRIHIPLPDHKTRAELFTLY
LSGAVGAHVSELASRTEGYSGSDIKLVCKEALMSGVRKMLPNMGRGAPNQRKDRVDLSAI
LTAIEKTKPVSKNLAKRHEEWQNETGCS
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggagttataaacaggccgatgagccagatgaggaaaatggagaccaaagactcc
ctcttccgggcgaggaagcgtatcctccggtacctggtccacagtttcctgaagaacgag
ggtctgttccactcggcggagaccctggccgaagaggcggcgctcacgggggaatacgaa
gtttgtgataatatcgacctggatattatcatgcaggactacaccagctactatctctcc
cggttcaacaagccgccacagttcctccgcccggcagcgccggcgccgcgccgtccgccg
acccggcacgcccggcccaaaccggagccgccgccggcaaaagaaacactggagctggag
ctaccagacacctttactatcacaccgttggtcaagcaggaatcagaaacaatccctgaa
tatatcccagctatagagcgcaagccgctatcagctttcctgggcaaagcgtctcctgag
aagaaggcgttcgtggaagctctctaccaggacatcatcagaccctcgggagtcagctgg
gacgatatcaagggactggaggcggccaagagcctgctaatggaatccgttgtgtatcct
gtgagatacccagaagtattcacgggtctcctagagccgtggcgcggggtgctcctccac
ggcccgccaggcacgggcaagacactgctggcgcgagcggtcgccgccgaaagccggtgc
acctttttcaatgtcgcccccagcaccatcgtcaccaagtggcgcggggactctgaaaga
atcgtcaaggtactgttcgagatggcatcatactacgcgccctcgataatcttcgtggac
gaagtggagacgctggcttccgagcgggggggcgccggggagcacgaggcctcgcgccgg
ctgaaggcgcagctcctgaccgagctggacggcgtcagcggccgtgggggcatcgtgttc
ttgctggccaactcgaacatgccttgggaaatcgatccagcgatgctccgtcgcctagaa
aagcgcatacacatccctctcccagaccacaagactcgcgctgagctcttcactctctac
ctgagcggggccgtgggcgcccacgtctcagaactggcctccaggacagaagggtactcc
ggcagcgacatcaagctggtctgcaaggaggcgctcatgtctggagtcaggaagatgctg
cccaacatggggagaggagcgccaaatcaacggaaagaccgcgtcgacctctccgccatt
ttgaccgcaatcgagaagaccaaaccggtttccaagaacctggccaagaggcacgaagaa
tggcagaacgaaaccggctgttcataa
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