Choristoneura fumiferana (eastern spruce budworm): 141440686
Help
Entry
141440686 CDS
T11020
Name
(RefSeq) aladin-like
KO
K14320
aladin
Organism
cfum Choristoneura fumiferana (eastern spruce budworm)
Pathway
cfum03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
cfum00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
141440686
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cfum03019
]
141440686
Messenger RNA biogenesis [BR:
cfum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
141440686
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_Aladin
Beta-prop_THOC3
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR5
WD40_CDC20-Fz
ANAPC4_WD40
Beta-prop_WDR3_1st
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
WD40_Prp19
Beta-prop_WDR19_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_EIPR1
WDR55
Beta-prop_WDR35_TULP_N
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR36-Utp21_2nd
Caps_synth
Motif
Other DBs
NCBI-GeneID:
141440686
NCBI-ProteinID:
XP_073961315
LinkDB
All DBs
Position
23:3254373..3260737
Genome browser
AA seq
474 aa
AA seq
DB search
MSAFHGFPELPGPDETAFCKLNEVYCCGDSRYGSVTTFTNTTKNHPVINVTRDVHHHRVT
DENISMYIDVDDNLLKKITSVWYKQGFLEALSVAADPSVNRENPLLSVAASYILKVANVF
TAFHYFMQPHLKDIGPKIVSNYSRTRNWGSAPIKCLAWHPHTTKIAVATLDDNIRVYCME
AGFVPMLKCKAQGHVSSLSWRPYSASEIAVGCEQGVIVWTVDPNSTFTKPSSSNAVVLKQ
PNHSPVTDVSWSPNGDLLISCSGADTSMLVWDVSMETAVPLRRVAGGGIVFSRWSFDATK
VIAATSSIIFRVWDTKQWIPERWCARGGRAVAACWGPNNVLLFAAKGEPIVYSLSNTGLM
NGAQTSKALPVLDVTKVELPSGEPVGGPILDMCWDPTGRYLALLFEESALVAVFCTTSLL
MQLKITPCCFVSGLEMEVPSTMAFQQNFADGACLTVAWSSGRVQHFPIVYSDGY
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcttttcatggatttcccgaattaccgggaccagatgaaactgctttctgtaaa
ttaaacgaagtgtactgctgtggggacagccggtatggaagtgtaacaacatttaccaac
acaactaagaaccaccccgtaataaatgtgacaagagacgtccatcaccaccgagtgacg
gacgaaaatatttctatgtacatcgacgttgacgacaatttgttaaagaaaataactagc
gtgtggtacaaacaagggtttttagaggctcttagtgtagcagcagaccctagcgtcaat
cgggaaaatccactattgtctgtagctgcatcatacatattaaaagttgcaaatgtgttt
accgcctttcattacttcatgcagccacatttgaaagatatagggcctaagattgtgtca
aattattctagaactagaaactggggtagcgctcctattaaatgtttagcatggcatcca
catacaacaaaaatagctgtagcgactttagatgacaatataagagtgtactgtatggaa
gcagggtttgtgcccatgttgaaatgcaaggcacaagggcatgtgtcttctttgagctgg
agaccatattcagcatcagagatagctgtgggatgcgagcaaggagtgattgtctggaca
gttgaccctaattcgacattcacaaagccatcttcaagtaatgctgttgtattaaagcaa
cccaaccacagccccgtgacagatgtgagctggtctccaaacggggaccttctcatcagc
tgctctggagccgatacatccatgctggtgtgggatgtcagcatggagacagctgtgcct
ttgagacgggttgctgggggtggtattgtattctcacgctggtccttcgatgccaccaaa
gtgattgctgccacatcatctattatatttagggtgtgggacacgaagcagtggatcccc
gagcggtggtgcgcacgcggcgggcgcgccgtggcggcttgctgggggcccaacaacgtg
ctcctgtttgcggccaaaggggaacccatagtttactccttgagcaacactggccttatg
aatggggcacaaaccagcaaagccctcccagtcctggacgtgactaaagtggagctgccc
tccggggagccagtggggggtcccatcctggatatgtgctgggaccccacggggcgttac
ttggcgctgctgtttgaggagtctgcgttggtcgccgtcttctgcaccaccagtcttttg
atgcagctgaagatcacgccttgctgtttcgtctccggactcgaaatggaagttccgtcg
acgatggcgttccagcagaacttcgccgatggtgcctgtctcaccgtggcctggtcgagc
ggacgagtacagcacttccccatcgtttactctgacgggtactag
DBGET
integrated database retrieval system
