Clarias gariepinus (North African catfish): 128505581
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Entry
128505581 CDS
T10780
Name
(RefSeq) collagenase 3-like
KO
K07994
matrix metalloproteinase-13 (collagenase 3) [EC:3.4.24.-]
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cgar01002
]
128505581
Peptidases and inhibitors [BR:
cgar01002
]
Metallo peptidases
Family M10
128505581
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Motif
Pfam:
Peptidase_M10
Hemopexin
PG_binding_1
Reprolysin_3
DUF4953
Reprolysin_5
Peptidase_M54
Reprolysin_4
Motif
Other DBs
NCBI-GeneID:
128505581
NCBI-ProteinID:
XP_053332064
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Position
17:complement(4140675..4144341)
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AA seq
467 aa
AA seq
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MKMHYATCFLVALAITVQSGPIPRQEEKDHVLAEAYLKKFYNLTSSTNKGRFGDMGLKLA
EMQKFFGLTVTGTLDSKTLEVMKKPRCGVVDVAAYSTFGADTKWQKNQLTYRIENYTPDM
SAAEVDDSIARALQVWARVTPLRFTRINSGVADIMISFGRASHGDAYPFDGPSGTLAHAF
APSPGIGGDAHFDEDETFTFASTSGFVLFLVAAHEFGHSLGLSHSNDPGALMYPTYSYRD
PKTFVLPADDVKGIQSLYGPNTEKPVEPSKPNPPPVTPSACDRTLVIDAVGTLRGERLFF
KDKFFWRSYGTNTIQQELIKGFWPEAPDNIDAAFENTVQDRLFLIKDQKVWAFSAYDLVS
GFPKSLSSMGVPAKVKKVSAALYDQNTGKTLYFVDNNYYSYDENKKKMDAGFPKPIEQSF
PGVTGKITAAFQYKGFTYFFSGTQIFEYSTSSKKVLRTLENSYFLKC
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgcactacgcaacctgctttctcgttgctctagcgattaccgtccagtcaggg
ccaataccaaggcaagaagagaaagatcatgtccttgcggaggcttacctgaagaaattc
tacaacctcacttcatccactaataaaggaaggttcggtgacatgggtctcaagctagcc
gagatgcagaagttctttggtctcactgtgacagggacgctggactccaaaacgctggag
gtgatgaagaagccccgctgtggcgttgtggacgtggctgcgtactccacattcggtgcg
gacaccaaatggcaaaagaaccagctgacctacaggattgagaattacactcccgacatg
tctgcggctgaagtggacgactctattgcgagagcgctgcaagtctgggctcgtgtcact
cctctgaggttcacccgcatcaacagcggtgtagctgatatcatgatttccttcgggaga
gcgtctcacggcgatgcctacccattcgatggaccgtccggcactctggctcatgctttt
gcaccgtctccgggcattggtggagacgcccattttgatgaagacgaaaccttcaccttc
gcttccactagtggatttgttttgttcctggtggctgcccatgagtttggtcactctttg
ggcctgtctcactccaacgaccccggtgcgctcatgtaccctacgtacagctacagagac
ccaaagacatttgttctgcctgcagatgatgtcaaaggcattcagtctctctacggcccc
aacacagaaaagcctgtcgagcccagtaaacccaatccccctccagtcaccccaagtgcc
tgtgaccgcaccctggtcattgacgctgtgggaactctgcgtggagagaggcttttcttc
aaggacaaattcttctggcgctcatacgggaccaacacgatccagcaggagttgatcaag
ggcttctggcccgaggctccagataacatcgatgctgcatttgagaacactgtgcaagac
aggctctttctcatcaaagatcagaaagtctgggctttcagtgcttacgaccttgtgagt
ggatttcccaaaagtctgagcagcatgggtgtgccggccaaggtgaagaaggtcagcgct
gcgctttacgaccaaaacactggcaagaccttgtacttcgtggacaacaattactacagt
tatgatgaaaacaagaagaagatggacgccggattccccaaaccgatcgaacaaagcttc
ccaggggtcactgggaaaatcactgctgccttccagtacaagggctttacctactttttc
agtggaacccaaatttttgagtacagcacctcatccaagaaggtgttgcgtacgcttgag
aattcctacttcttaaagtgctaa
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