Clarias gariepinus (North African catfish): 128505679
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Entry
128505679 CDS
T10780
Symbol
tln1
Name
(RefSeq) talin-1
KO
K06271
talin
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04510
Focal adhesion
cgar04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
128505679 (tln1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
128505679 (tln1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cgar04147
]
128505679 (tln1)
Exosome [BR:
cgar04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
128505679 (tln1)
Exosomal proteins of other cancer cells
128505679 (tln1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Talin_IBS2B
TLN1-like_RS
Talin_VBS2
I_LWEQ
Talin_middle
VBS
Talin_R4
FERM_f0
IRS
FERM_M
FERM_N
RA_2
ACBP
PH_SLA1
Vinculin
VBS_C3G9
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
128505679
NCBI-ProteinID:
XP_053332198
LinkDB
All DBs
Position
17:20184143..20267774
Genome browser
AA seq
2540 aa
AA seq
DB search
MVALSLKIGVGNVVKTMQFEPSTMVYDACRIIRERVPEAQLGQPNDYGLFLSDDDPKKGI
WLEAGKALDYYMLRNGDTLEYKKKQRPLKIRMLDGTVKTVMVDDSKIVTDLLMTICARIG
ITNHDEYSLVRDIGEEKKEETTGTLKRDKTLLRDDKKMEKLKQKLHTDDELNWLDHGRTL
REQGVEETEMLLLRRKFFYSDQNVDSRDPVQLNLLYVQARDDILNGSHPVSFDKACEFAG
YQCQIQFGDHNESKHKPGFLDLKEFLPKEYVKNKGEKKIFQAHKNCQNMTEIEAKVSYVK
LARSLKTYGVSFFLVKEKMKGKNKLVPRLLGITKESVMRVDEKTKEVIQEWSLTNIKRWA
ASPKSFTLDFGDYQDGYYSVQTTEGEQIAQLIAGYIDIILKKKKSKDHFGLEGDEESTML
EDSVSPKKSTLLQQQFNKVERVETGSVALPVIMRPGAGGPESFQMGSMPQAKQQITSGQM
HTGHMPPLTSAQQALTGTINSSMQAVQAAQASLTDFDSLPPLGTDAASQAWRKNKMDESK
HEIHSQVDAITAGTASMVNLTAGDPAETDYTAVGCAVTTISSNLTEMSKGVKLLAALMED
EGGNGQQLLGAARNLACAVSDMLKTAQPSSAEPRQNLLQAAGNVGQASGELLQQIGESDA
DQQFQDMLMKLAKAVATAAATLVLKAKNVAQKTEDSAQQNRVIAAATQCALSTSQLVACT
RVVAPTISSPVCQEQLIEAGKLVAKSVEGCVEASQGATNDEQLLKQVGAAATGVTQALNE
LLQHIKQYASGGQPIGRHGEATDRILDVTENIFSSMGDAGEMVRQARILAQATSDLVNAI
KADAEGETDLENSRKLLSAAKLLADATAKMVEAAKGAAANPDSEEQQQKLREAAEGLRMA
TNAAAQNAIKKRLVNKLENAAKQAAAAATQTIAAAQHAASSNKNPAAQQQLVQSCKGVAD
QIPQLVQGVRGSQAQPDSPSAQLALIGASQNFLQPGAKMVTAAKATVPTIGDQASAMQLS
QCAKNLASALAELRTAAQKAQEACGPLEIDNALNAVRGLEKDMQEAKAAAAEGKLRPLPG
ETLEKCSQDLGSNTKAVSSAVAQLLSEATQGNENYTGMAARDVAQALRSLASAARGVAAT
TEDPQARGAMLDCAGDVLDKSGNLIEETKRAIAKPGDPDSQQRLAQVAKAVSQALNRCVN
CLPGQRDVDNAIRNVGEASKKLLSDQFPASAKSFQEAQANLNQAAAGLNQSANELVQASR
GTTQDLAKASGKFSQDFSHFLEAGVDMAGQSQSKEDQTQVVTNLKTISMSSSKLLLAAKA
LSTDPNSPNLKNQLAAAARAVTDSINQLITMCTQQAPGQKECDNALRELETVRGMLENPT
EAVNDMGYFDCIDSVMENSKVLGEAMAGISHNAKNSNLPEFGDAVSSASKALCGLTEAAS
QGAYLVGVSDPNSHAGQKGLVDPAQFAKAKQSIQMACQNLVDPACTQSQVLSAATIVAKH
TSALCNACRLASSKTSNPVAKRQFVQSAKEVANSTANLVKSIKALDGAFNQENRQKCKAA
TGPLIEAVDNLTAFASNPEFASVPAQISPEGLAAMEPIVAAAKTMLESSTGLIETARSLA
VNPKDPPKWSVLAGHSRTVSDSIKKLITNMRDKAPGQRECDEAIDVLNNCIRDVDQASLA
AISQQLAPRDDISHEALHEQMAASVQEISNLIDPVAIAARSDASQLGHKVSQMASYFEPL
IMAAIGTASKILNSQQQMNVLDQTKTLAESALQMLYTAKEAGGNPKAAHTQEALEESVQM
MKEAVDDLGGTMAEAASAAGSVGGMVDSISQAINKMEDPGVEPEGTFVDYQTTMVKTAKA
IAVTVQEMVTKSNTNPDELGGLANQLTTEFGDLASEAKCAAITAESDEIGSHIKKQVTEL
GYGCTGLVTKAGALQCSPNDSITKKELIDAARKVSEKVSHVLAALQAGNRGTQACITAAS
AVAGIIADLDTTIMFATAGTLNRENAETFADHREHILKTAKVLVEDTKLLVSGAGASQEK
LAQAAQSSVNTITKLSDVVKLGAASLGSEDPETQVVLINAVKDVAKALGDLIRATKAAAG
KPHDDPAMLQLKSSAKVMVTNVTSLLKTVKAVEDEATKGTRALEATIEHIKQELTVFRSP
DPPPKTATPEEFIRMTKGITQATAKAVAAGNSCRQEDIIATANLSRRAIAEMLHSCKQAA
YHPEVNSEVQSRALRFGTECAHGYLGLLEHVLVIIQKPTHDLKQQLATFSKRVAGSVSEL
IQAAEAMKGTEWVDPEDPTVIAENELLGAAAAIEAAAKKLEQLKPRAKPKEADESLNFEE
QILEAAKSIAAATSALVKAASAAQRELVAQGKVGAIPANAVDDGQWSQGLISAARMVAAA
TNNLCEAANSAVQGHASEEKLISSAKQVAASTAQLLVACKVKADQDSQTMKRLQAAGNAV
KKASDNLVKAAQKAAFDAQDDQAVMVKSKMVGGIAQIIAAQEEMLRKERELDEARRKLAQ
IRQQQYKFLPSELREDGNDQ
NT seq
7623 nt
NT seq
+upstream
nt +downstream
nt
atggtggcgctatcactaaagatcggggtgggaaatgtggttaaaacaatgcagttcgag
ccctccaccatggtgtacgacgcctgtcgcatcatccgggagagagttcctgaggcgcag
ctcggccaacccaacgactatggcctgttcctgtcagatgacgacccaaagaaaggcatt
tggctggaagcaggaaaagccctggactattacatgttgagaaacggggatacgctcgaa
tacaagaagaaacagaggccactcaagatccgcatgctggacgggacagtgaaaacggtt
atggtggacgactccaaaatcgttaccgacttgctcatgaccatctgtgccagaataggc
attacaaaccatgatgagtactccctggtgcgtgatattggtgaggaaaagaaggaggag
accacagggactctgaagagagacaaaaccctcctgagggacgacaaaaagatggagaaa
ctcaagcagaagctccacactgacgatgagttgaactggctggaccacgggcgaacgctg
cgtgagcagggcgtggaggagacagagatgctactcctcaggaggaagttcttctactcg
gaccagaatgtagactccagagacccggttcagctcaacctgctctacgtacaggcacga
gatgacattctgaacggatcccatcctgtctcatttgacaaagcttgtgagtttgccggg
taccagtgtcagatccagtttggtgaccataatgaatccaaacacaaaccaggattcctc
gatttgaaggagttcttacccaaagagtatgtaaagaacaaaggcgagaagaagattttc
caggcgcacaagaactgccaaaatatgactgagattgaagccaaagtcagctacgtcaaa
ctggcccgctctctcaaaacctacggagtgtccttcttcttagtaaaggaaaaaatgaaa
gggaaaaacaagctggtccctcgcctgctgggcatcaccaaggagagcgtgatgagggtg
gacgagaagaccaaggaggtgattcaggagtggagcctgacaaacatcaagcgctgggct
gcctcccctaaaagcttcaccctggactttggcgattatcaagacggctactactctgtc
cagaccactgaaggagaacagatcgcacagctgattgctggatacatcgacatcatcctc
aaaaagaaaaagagcaaagaccacttcggattggagggagatgaggagtccaccatgttg
gaggattctgtttcacctaaaaaatcgacactgctgcagcagcagttcaataaggtggaa
agggtggagacaggctctgttgctctgccagtcatcatgcgcccaggtgcaggaggtcca
gagagcttccagatgggctccatgccccaggccaagcagcaaatcaccagcggccaaatg
cacacaggacacatgccacccctgacttcggctcagcaggcattgacaggcacaattaac
tccagtatgcaggcagtgcaggcagcccaggcctctttgactgacttcgacagccttcca
ccactgggcactgatgcggcctctcaagcctggaggaagaacaaaatggacgagtccaaa
catgaaatccattctcaggtggatgctattactgcaggaactgcatctatggttaatctc
actgcaggagatccagcagagacggattacacggccgtcggctgcgcggtgaccaccatc
tcctccaacctgaccgaaatgtccaagggtgtaaagttgctggcggcgctgatggaggat
gagggtggaaacggacagcagctcctgggcgccgcccgtaacctcgcctgcgcggtgtca
gacatgctaaagaccgcccagccttccagcgctgagcctcgacagaacctcctgcaggct
gcaggtaacgtgggccaggccagtggagagctgctgcaacagataggagagagcgacgct
gaccagcagttccaggacatgctaatgaagctggctaaagctgtggctacagcagcagca
actctggtgctgaaggcaaagaacgtggcccagaagacagaagactcggcccagcaaaac
cgtgtcatcgctgctgccacacagtgtgccctttccacatctcagctggtggcatgcact
cgggttgtggctcctaccatcagttccccagtatgtcaggagcagctgatcgaggcaggg
aaactggtggctaaatcggttgaaggctgcgtagaggcatcccaaggggccaccaatgac
gagcagctgctgaaacaagtgggtgcggctgccacaggtgtcacccaggcccttaacgag
ctgctgcagcacatcaagcagtacgccagcggaggccagccgatcgggcgccatggagag
gccaccgaccgcattctggatgtaactgagaacatcttcagctccatgggagatgcaggt
gagatggtgagacaggctcggatcctggcccaggccacctccgacctggtcaacgccatt
aaagcagacgcagagggagaaacagacctggaaaattcccgtaaactgctctcagctgcg
aagcttcttgctgatgcaactgccaagatggtggaagctgccaagggtgctgccgctaac
ccagacagtgaggagcagcagcagaagttgcgtgaggctgctgagggcctgcgcatggcc
accaatgcagcagcacagaatgccatcaaaaagagacttgtcaacaagctggagaacgct
gcaaagcaggccgccgcagccgcaacgcagaccatagcagccgcccagcacgccgcctca
tcaaacaagaaccctgctgcacagcaacaacttgtacagagctgcaagggggtggcggac
cagatccctcagctggtgcagggagtaagaggcagccaggcgcagccagacagccccagc
gctcagctcgccctaatcggagccagccagaacttccttcagcctggagccaagatggtg
accgcagccaaggctacagtgcccactattggcgaccaggcctctgccatgcagctcagt
cagtgtgccaaaaatctggccagtgcgttggctgaactccgcacagctgctcaaaaggct
caggaagcctgcggtcctttggaaattgataacgccctgaacgctgtgaggggtttggag
aaagatatgcaggaggctaaagccgcagcagccgaagggaaactcagaccccttcctgga
gagacgctggagaagtgctctcaggacctgggctccaacaccaaggcagtgagctctgct
gttgcacagctactgagtgaagctacacagggcaatgagaattacaccggcatggcagca
cgtgacgtggctcaggctctccgttccctcgcctctgcagcccgtggtgtggctgccacc
acagaggacccacaggcacgcggcgcaatgctggactgtgccggtgacgtcctcgacaaa
tcaggcaacctcatcgaagagaccaagagagctatcgccaaacctggagacccagacagc
cagcagcgtctcgcccaggtggccaaggctgtgtctcaggctctgaaccgctgtgttaac
tgccttcccggacagagagatgtggataatgccatcaggaatgtgggagaggccagcaaa
aaactgctttctgatcagttccctgctagtgcgaagagcttccaggaagctcaggcgaac
ctaaaccaggcagctgccgggctcaaccagtctgccaacgagctggtccaggcatcacgc
ggcaccacgcaggacctggccaaggcatcgggcaagttcagccaagacttcagccacttc
ctggaggctggagtggacatggccggacaatctcagtctaaagaagaccagactcaggta
gtaaccaacctgaagaccatttctatgtcatccagcaagctgctattggcagccaaggct
ctgtctactgaccccaattcccccaacttgaagaaccaactggctgctgcagcacgtgcc
gtgactgacagcatcaaccagctgatcaccatgtgtacacagcaagcaccgggtcagaag
gaatgtgacaacgcgctaagggaactcgagacggtgcggggcatgctggagaacccaact
gaggcagtgaatgacatgggctactttgactgcatcgacagtgtgatggaaaactccaag
gttttgggtgaagccatggctgggatctcccacaacgcaaagaacagcaacctgcccgag
ttcggagacgccgtcagctctgcctccaaagccctgtgtggcctcaccgaagctgcttct
cagggtgcctatctggtgggtgtctctgatccgaacagccatgctggacaaaagggcttg
gtggatcctgctcagtttgccaaagccaaacaatccattcagatggcctgtcagaacctg
gtggaccctgcgtgcactcagtcccaggtcctctctgctgcaacgattgttgccaaacac
acctccgccctttgcaatgcctgccgcctcgcctcctccaaaacatcaaaccctgttgct
aagcgacagtttgtccaaagtgccaaagaagtggcgaacagcacagccaaccttgtcaag
tcaatcaaagccctggatggagccttcaaccaggagaacaggcagaagtgcaaggcggca
acagggccgctgatcgaggcagtggataatctcactgcctttgcctccaacccagagttc
gccagtgtgcctgcacagatcagcccagagggtctggctgcgatggagcccatcgtggct
gcagctaaaacaatgctggagagctcgacaggtcttatcgagactgcgcgctcactggcc
gtgaaccctaaagaccctcccaagtggtcagtgctggccggccactccaggactgtatcc
gactccatcaagaagctcatcaccaacatgagagataaggctccaggtcagagagagtgt
gatgaggccatcgacgttctcaataactgcatccgtgacgtagaccaggcttctcttgct
gccattagccaacaacttgcacccagagatgacatctcccacgaggccctgcatgaacag
atggcagcttcagtgcaggagattagcaacctgatcgacccagtggccatcgcagctcga
tccgatgcctcccagctgggacacaaggtgtctcagatggcaagctatttcgagccgctc
atcatggcagccattggcaccgcatcgaaaattctgaacagccagcagcagatgaacgtg
ttggaccagacaaagactttggcagagtcagccttgcagatgctctatacagccaaagaa
gcaggcggcaaccctaaggcggctcacacccaggaagccctggaggagtctgtgcagatg
atgaaggaggctgtcgatgacttgggaggtacaatggctgaagcagccagtgcagcagga
tctgtaggagggatggtcgactctatcagtcaggccattaacaaaatggaagaccctgga
gtggagcctgaaggaacctttgtggattaccagactactatggtgaagacggccaaggca
attgcggtcactgtgcaggagatggtcactaaatcaaacaccaaccccgatgagctcgga
gggctcgccaatcagctgaccactgagttcggtgacttggcgtcagaggctaagtgtgcc
gccatcacggctgaaagcgatgagattggctctcacattaagaagcaggtaacagaacta
ggctacggttgcaccggattggtcaccaaggcaggagctctgcagtgcagtccgaacgat
tcgatcaccaagaaagagctcattgacgctgctcgcaaagtctctgagaaagtgtcccat
gtgttggccgcactgcaggccggtaaccgcggtactcaggcttgtatcacagctgccagt
gctgtggctggcatcattgctgacctggacactaccatcatgtttgcaacagcgggtaca
cttaacagggagaatgcagagaccttcgccgatcacagagagcacatcctgaagacagct
aaagttctggtagaggacaccaaactgttggtgtctggagcaggagccagtcaggagaag
ctagcacaggccgctcagtcatcagtcaacaccattaccaaactgtccgatgtggtcaag
ctgggggccgccagcctgggatctgaggaccctgagacacaggtggtcctgataaacgcg
gtcaaagatgtagctaaagctctgggtgacctcatcagagccaccaaggcagcagccggc
aagcctcacgatgacccggccatgctccagctgaagagctctgcgaaggttatggttacg
aacgtcacgtcgctgctgaagactgtgaaagctgtggaggacgaggccactaaaggcacg
cgagcattggaggccaccattgagcacatcaaacaggagctgactgtgttccgcagtcca
gatcctcctccaaagacggctacaccagaggagtttatccgcatgaccaaaggcatcacg
caggccacagccaaggcagtggccgctggaaactcatgtcgccaggaggacatcatcgct
acagccaacctgagcagaagagccatcgccgaaatgctgcattcctgcaagcaagctgct
tatcaccctgaagtaaacagcgaggtgcagagccgtgctctgcgctttggaacagagtgt
gcccatggctatctgggtctcctggagcatgtgcttgtgatcattcaaaagcccactcac
gatctgaagcagcagctggcaaccttctccaagcgggtggccggctcggtctctgagctc
atccaggcagctgaagccatgaaaggcactgaatgggttgaccccgaggatcccactgtc
atcgcagagaacgagctgctgggcgcagcggccgctatcgaagctgccgctaagaaactg
gagcagctgaaaccacgagccaaacccaaggaggctgacgagagcctgaactttgaggag
cagattctggaggcagccaaatccatcgctgctgccactagtgcgctggtgaaggcggca
tctgccgcacagagagagctggtggcccagggcaaggtcggtgccatcccagcaaacgca
gttgatgatggacagtggtctcagggtctcatttcagctgcccgcatggttgctgcggca
accaataacctgtgtgaggcagcgaactcggcagtacagggccatgctagtgaggagaag
ctaatttcttcagccaaacaggtggctgcctcaacagctcagctgctcgtggcctgcaag
gtgaaggccgaccaggactcacaaaccatgaagaggctacaggctgctggtaacgctgtg
aagaaggcttcagataatttagtgaaggcagcacagaaggctgcttttgatgcccaggat
gaccaggctgtaatggtgaagagcaagatggtgggcggcattgctcagatcatcgcagct
caggaggagatgttaaggaaggaaagggagctggatgaagccaggaggaagctagcccag
atccgacagcagcagtataagtttctgccctcagagctgagggaggatggcaacgatcag
tga
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integrated database retrieval system
