Clarias gariepinus (North African catfish): 128506129
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Entry
128506129 CDS
T10780
Symbol
dysf
Name
(RefSeq) dysferlin isoform X1
KO
K18261
dysferlin
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgar04131
]
128506129 (dysf)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cgar04147
]
128506129 (dysf)
Membrane trafficking [BR:
cgar04131
]
Endosome - Lysosome transport
Others
Ferlins
128506129 (dysf)
Exosome [BR:
cgar04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
128506129 (dysf)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
dsrm_Ferlin
FerB
Ferlin_C
FerA
FerI
PI3K_C2
Pex24p
CEP76-C2
PTEN_C2
Motif
Other DBs
NCBI-GeneID:
128506129
NCBI-ProteinID:
XP_053332443
LinkDB
All DBs
Position
1:complement(31617544..31696613)
Genome browser
AA seq
2100 aa
AA seq
DB search
MLRCILQRATNLKNVEKGERQSDPLASITFRGSKKKTKVVKNNVNPVWNEGFEWDLKGVP
LDSAAELHVVVKDHEKMGRNRFLGECRVSLRDVLNSPSLAATFTVSLMDTKRNNTGATVT
LQVSYIPPPGMAPVFLPPPLPETPHNTVELDTVTVFSLDTMGDEDTESMLMVEVAEEPEP
VPGPQGQEIGAPHTPPKKAPPTFTHGMKKKKQQNNKAPLSNKPQDLQVRVRIIEGRQLPG
INIKPVVKVTVGGQTKRTRIKKGNNPFFDETFFLNFFETPSDLFDEPIFLTVFDSKSLRT
DSVIGEFKLDVGMVYNEHKHAILRKWLLLADPDDLCAGARGYLKVSLIVLAAGDEPPTEK
EGVQEREDIEANLLRPAGLTLRGATFTLKVLRAEDLPQMDDAFVDGIRQILGFDSNRKNL
VDPLVEVNFAGKTMCSKILEKNANPQWNQSLTLPIRFPSMCEKMRIRILDWDRASHNDVI
GTTHLCISKISAPGGEIEDDLNPRSLQSAIDDSLGFLPTFGPCYVNMYGSPREFSTFSDP
HEALNLGKGEGVAYRGRVLLELTTKLCERVEQKVEDIHPDDLLVVEKFMRKRKYSLFAAF
YSATLLQDVDDAIQFEVSIGNYGNKFDYTCLPLASTTQYSRAVFDGCHYYYLPWGNVKPV
VVLSSEWEDISPRIEALNMLLFITERLESNLKLVQLEFQAGGDQDRLEERVVKLLDDLIS
DCSEELPELDEWPCVTPLDKALRRLRKMNLKQIEQAALALKHGQETELSTVLEQAEDWAM
RLRTLTEEPQNSLPDIVIWMLQGDKRVAYHRIAAHEVLFSQGYCGKYCGQLQTVFMKYPQ
GGSEDCKIPAQLRVKVWFGLAADVKYFNQFSEGKLSVFTETYENQTKLALVGNWGTTGLT
YPKFSDITGRVKLPKETFKPSTGWSWAGEWFISPEKTLLYDVDAGHMTFMEEVFENQMRL
PGGQWIGMPEGYTDVNGEKAVPKDDIECPPGWMWEDEEWSKDLKRAVDDQGWEYGITIPP
DRRPKSWVPAEKMYHTNRRRRWIRLRRRDLQKMEALRKQRPDESEREGWEYASLFGWKFH
LKQKKTDSFRRRRWRRRMEPLEKTGPVAIFALECSLGNVTDDKNDDKSVTTTFGVNRPTI
SCFFESGTRYHLRCYLYQARDLLAMDKDSFSDPYAIVSFLHQSQKTVTIRNTLNPTWDQT
LIFYEVEIFGDPKVTEKSPPNIVVELYDQDTYGADEFMGRSICKPSLVSSPRLAWYPIVK
GSKAAGELLASFELIRRDKPAIHHIPGQEGDLIHHSHIMDELVFSAAFTESLQQWPEDSD
LPHPPPQREPNVFIVPHGIKPVLERTAIEILAWGVRNLKSYQLASVTSPSLQVEVGGCMV
QSCVIRNTKKNPNFDINTLFIDVRLPREELYMPPLVIKVIDNRQFGRKPVVGQCTIRSLE
EYRCLPDNHEEEPTEEELETIPHTPRDDVLIDIDDKEPLLLGQEDDFMDWWSKFYASTGE
RKKCGTYLDKGLDTLQVYDTELEKVAGFEQLADFCQTFKLYRGRTQESESDDPSIVGEFK
GMFKIYPLPDDPSTPSPPRQFCLLPSNGIEECIVRVYVIQAYGLQPKDTNGKCDPYVKIT
LGKKSVNDHDNYIPCTLDPVFGKMYELTCSLPLEKDLKIMLYDYDMLSKDEKIGETVIDL
ENRFLSRYGARCGLPQSYCVSGVNQWRDQIKPTQLLHRFCQKRNCKLPVYKHDKVIFKGH
EYTTADLVDEAKPANPHLGPLEERLALLVLRRQGLVPEHVETRPLYSPLQPDIEQGRLQL
WVDLFPKSMGPPGSPFNITPRKAKKFFLRCIIWNTHDVILDDVSVTGEKMSDIYVKGWML
GHEGNKQKTDVHYRSLGGEGNFNWRFLFPFHYLPAEQLCTVDKKEHFWSLDKAETKVPPK
LTIQIWDNDKFSFDDYLGCLEMDLNHMLKPAKSPEKCGLELLSQPQDKLVSLFEQKTVKG
WWPCVCDRQGETILAGKVEMTLEIVSEQEQDERPAGLGREEPNMNPRLEEPQRPETSFLW
FSSPYKTLKFIVWRRFKWVILGLIILFFILLFLGVFLYAFPNYAAMKMVGPFSGIGNGKQ
NT seq
6303 nt
NT seq
+upstream
nt +downstream
nt
atgttgaggtgtattcttcagagagcgaccaacctgaagaatgtggagaaaggggaacgg
caaagtgatcccttagccagtatcacatttagagggtctaagaagaagaccaaagtggtt
aaaaacaatgtcaaccctgtctggaatgagggttttgaatgggacctaaaaggagtgccc
ttagactcagcagcagagctgcatgtagttgtgaaggaccatgaaaaaatgggaaggaac
agatttctgggagaatgtcgtgtttctttaagagacgtacttaactccccaagcctagca
gctaccttcactgtatccttaatggacactaaaaggaacaacactggggccacagtgact
ctgcaggtttcctacatccctcctccaggcatggctcctgtctttctgcccccaccactg
cctgagactccgcacaatactgtagagctggacactgtcacagtgttctcgttggacacc
atgggggatgaggacacagagagcatgctcatggtggaggttgcagaggagcctgaacct
gtcccaggaccgcaaggccaggagattggggctcctcatacaccaccaaaaaaagctcct
ccaacatttacacatggcatgaagaaaaagaaacaacaaaacaacaaagccccactttcc
aacaaaccccaggacctacaggtacgggtccgaatcatcgagggaaggcagctgcctggc
atcaatattaaacctgttgtcaaagtaactgtgggaggccagacgaagagaacgcgcatc
aagaaaggcaacaatccattttttgatgagactttcttcctaaacttctttgagacaccc
tcggatctctttgatgaacctatttttttaacagtatttgactcaaagtctcttcgtaca
gactccgtcattggagaatttaagctggatgttggcatggtgtataatgaacacaaacat
gctattcttaggaagtggctgttgctggctgatcctgatgacctttgtgctggggccaga
gggtatctgaaggtcagccttatagtccttgctgcaggtgatgagccaccgactgaaaaa
gagggtgtccaggaaagggaagacattgaagcgaacttgctaagaccagcaggtcttact
ctcagaggagccaccttcactcttaaagtcttgagggcagaggacttgcctcagatggat
gatgcatttgtggatggcataaggcaaattctgggttttgattcaaaccgaaaaaacctg
gtggatccattagtagaagtcaactttgccggcaaaacgatgtgcagtaagatattggag
aagaacgccaacccacagtggaaccaaagtcttacgctccctatcagatttccatctatg
tgtgagaagatgaggattcgcattttggattgggatcgagcgagccacaatgatgtcatt
ggcaccactcacctatgtatttcaaagatctctgctccaggcggggagatagaagatgac
ttgaaccccaggagcctccaaagtgccattgatgatagcctgggattcctgccgacattt
ggcccctgttatgtgaatatgtatggaagtcccagagagttcagcaccttctcagatccc
catgaggcgcttaaccttggcaagggtgaaggtgtagcatatcgtggccgagtgctcttg
gagctcaccactaagctgtgtgaacgagtggaacaaaaagtggaagacattcaccctgat
gaccttctggtggtagagaaattcatgcggaagagaaagtactctctgttcgctgctttc
tattcggccacccttcttcaggacgtggatgatgccattcagtttgaggtcagcatcggc
aactacggcaacaagtttgactacacctgcctccctctggcctccacgacacagtacagc
cgagctgtgtttgatggttgtcactactattacctgccttgggggaatgtgaagcctgtg
gtggtgctatcgtcagagtgggaggacatcagcccccgtattgaggcccttaacatgctg
ctgttcatcacagagcgtctggaatcaaatctgaagcttgtacagttggagttccaagca
ggcggtgaccaggacaggctggaggagagggtcgttaaactacttgatgacctcatctct
gactgcagtgaggagctccctgagctggacgaatggccatgcgtgacgcctctagataaa
gctctgcggcgtttgcgtaaaatgaacctgaagcagatcgagcaggccgctctggcgcta
aaacacggccaggagacggagctgagcacagtcctggagcaggctgaggactgggccatg
agactgcgcacactcactgaggagccccagaacagtctgccagacatagtgatctggatg
cttcagggggacaaaagagtggcgtaccacagaatcgcagcccacgaagtgctcttctcg
caaggttactgcggtaaatactgtggccagctgcaaaccgtcttcatgaagtaccctcag
ggtggtagcgaggactgtaagatcccagcacaacttcgagtgaaggtctggtttggattg
gctgctgatgtaaagtacttcaaccagttttcagaaggaaaactgtctgtgtttacagag
acatatgagaaccagactaaattagctctagtgggaaactggggcacaacaggtctcact
taccccaagtttagtgacattaccgggagggtgaagctgcccaaggagacctttaaaccc
tcgacaggctggtcatgggccggagaatggtttatcagcccagagaaaaccttgctatat
gatgtggacgctggacatatgacttttatggaggaagtgtttgagaatcagatgcgactg
ccagggggacaatggatcggcatgccagaaggctacacagatgtgaatggagagaaagca
gtgcctaaagacgatattgagtgtcctccaggctggatgtgggaagacgaagaatggagt
aaagatctaaaacgggctgtagatgatcaggggtgggagtatggcattaccatccctcct
gaccgtaggcctaagtcttgggttccagctgagaaaatgtatcacaccaatcgccgtcgt
cgttggatccgccttcgccgccgagacctgcagaaaatggaagcactcagaaagcagcgt
ccagatgagtcggagagggaaggttgggagtatgcctctctatttggctggaagttccac
cttaagcaaaagaagacagattcttttcgccgtcgccgttggcgccgccgcatggagcct
ctggagaagactggaccagtggccatctttgcgctggagtgctcactgggcaatgtgacc
gatgacaaaaatgatgacaagtctgtcacaacaacctttggtgtcaatcgtcccaccatc
tcatgcttctttgaaagtggaacacgctaccatttgcgctgctatctctatcaggctaga
gacctactggctatggataaagacagtttctcagacccctatgccattgtgtcatttctg
caccagagccagaagacagtgaccataaggaacacgctcaatcccacctgggatcagact
cttatcttttatgaagtggagatattcggagatcccaaagtgacagagaaaagcccgcca
aacattgtggtggaactctacgatcaagacacttatggggcagatgagttcatgggccgc
agcatatgcaagccctctttggtgtcctctcctcgtctggcatggtatcccatcgttaaa
ggtagcaaagcagctggggaactacttgcttcatttgagctgatccgcagagataagcct
gcaattcatcacatccctggtcaagagggcgaccttatccaccattctcatattatggat
gagcttgtattttctgccgccttcaccgagagtttgcagcaatggccagaagactcagat
ttgccgcacccgcctccccagagagagccaaatgtcttcattgtgccacatggcatcaaa
cctgtcctcgagcggactgctattgagatccttgcatggggagtacgcaacctgaagagc
taccagctggccagtgtgacatctcccagcttgcaggtcgaggttggaggttgcatggtg
cagtcctgtgtcatccgcaacacgaagaaaaatcccaactttgacatcaacacgctcttc
attgatgtgcggctgcccagggaggaactctacatgcctccactggttatcaaggtaatt
gacaaccggcagtttggcaggaaaccagtggtgggccaatgcaccatccgttctctggag
gaataccgctgcctgcctgacaaccacgaggaagagcccacagaagaggagctggaaacc
attcctcacacaccaagagatgatgtactaattgacattgatgacaaggaacctctactt
cttggacaggaggatgatttcatggattggtggagtaagttctatgcctcgacaggagag
aggaaaaagtgtgggacctatctggacaaaggccttgacactctacaggtgtatgacact
gaattggaaaaagttgccggctttgagcagctggcagatttttgtcagacgttcaagctt
taccgcggacgcactcaggagagtgaaagtgacgatccttccattgttggagagttcaag
ggcatgtttaagatctacccattaccagatgatccttctactccgtcacccccacgccag
ttctgtctccttccttccaatggaatagaggaatgtatagttcgggtgtatgttattcag
gcctatggacttcagcccaaagacaccaatggcaagtgcgacccatacgtcaagatcaca
ttaggaaagaaatcggtaaacgatcatgacaactacataccctgcaccctagacccagtt
tttggaaagatgtacgaattgacatgctccctgcccctagaaaaagacctaaagatcatg
ctgtatgattatgacatgctgtctaaagatgaaaagattggtgagacggtcattgacctg
gagaaccgctttctgtcacgttacggtgcccgctgtggccttccccagtcttactgtgtg
tctggagtgaaccagtggagagatcagataaaacccactcagctgctccatcgtttctgt
cagaaaagaaactgcaaactgcctgtctacaagcacgacaaagtgatttttaaaggccat
gagtacaccactgcagaccttgtagatgaggcaaagccagcaaaccctcaccttgggcca
ctggaggagcggctggctctgctggtgctgagaagacaaggccttgtgcctgaacacgtg
gagaccaggcccctatacagccccctgcagcccgacatagaacagggacggttacagttg
tgggtggatcttttccccaaatccatgggccccccaggatcacctttcaacattacccca
cgcaaagcaaagaagttctttttacgctgcatcatatggaacacccatgatgtaatactc
gatgatgtcagtgttacaggcgagaagatgagcgacatttatgtgaaaggatggatgctt
ggccatgaagggaacaagcagaagacggatgtgcattatcgctcgctgggtggcgagggt
aactttaactggaggttcctctttcccttccactacttacctgctgaacagctgtgtact
gttgacaaaaaggagcacttctggagtttggataaggccgaaacgaaggttcctcccaaa
ttgaccattcagatttgggacaatgacaagttctcctttgatgattaccttggttgttta
gaaatggatctgaaccacatgctgaagccagcgaagtctcctgagaaatgtggtctggag
ttgctctctcagccccaggacaagctggtgtctctgtttgaacaaaagacagttaagggc
tggtggccttgtgtatgtgacagacagggagaaacgatcttagctggcaaggtcgagatg
acactggagattgtgtcagagcaagaacaggatgagaggcctgccggtctgggcagagaa
gagcccaacatgaatcctcgtcttgaggagccacagcgtcctgaaacctccttcctgtgg
ttctcttctccttataaaaccctgaagttcatagtgtggaggaggtttaaatgggtgatc
ctgggactgatcattctcttcttcatcctgctcttcctgggagtctttctctacgctttc
cctaactatgctgctatgaagatggtgggccccttcagtggaataggaaatggaaaacaa
tga
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