Clarias gariepinus (North African catfish): 128506541
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Entry
128506541 CDS
T10780
Name
(RefSeq) complement C3-like
KO
K03990
complement component 3
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04080
Neuroactive ligand-receptor interaction
cgar04145
Phagosome
cgar04518
Integrin signaling
cgar05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
128506541
04518 Integrin signaling
128506541
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
128506541
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
128506541
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cgar01002
]
128506541
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgar04131
]
128506541
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cgar04147
]
128506541
Peptidases and inhibitors [BR:
cgar01002
]
Peptidase inhibitors
Family I39: alpha2M family
128506541
Membrane trafficking [BR:
cgar04131
]
Endocytosis
Phagocytosis
Opsonins
128506541
Exosome [BR:
cgar04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
128506541
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TED_complement
A2M_BRD
MG1
NTR
A2M
A2M_recep
MG4
MG3
MG2
ANATO
C3_CUB2
Transglut_C
Motif
Other DBs
NCBI-GeneID:
128506541
NCBI-ProteinID:
XP_053333012
LinkDB
All DBs
Position
18:7460638..7488211
Genome browser
AA seq
1650 aa
AA seq
DB search
MMNVDVVWLTAVLLSFPLLTLCDPLNVLVAPNLLRVGTPERVFVEAQDYSGNDLNVKITV
KNHPQKTTELASESVVLTAANNYQAVVDITIPDNKDFFSEDPLEKQYAYLQAKFPSAELE
KLVLLSFQSGYIFVQTDKSIYTPGTQVRYRIFSLTPDLQPVEQTGGIYVEIINPQEITIN
RETFFTKKGTITGSYVIPEVAKPGIWSLVARYKNTPQKNFTAEFEVKEYVLPSFEVALKP
SKSFFYVDDQNLQVDITAKYLFGRNVDGVAFVVFGVTKDNNKATLPASLKREQITNGEGR
AVLTREMIQQSFPNIPDLVGSSLYISVSVLTGTGSEMVEAERRGIQIVTSPYTIQFKRTP
QFFKPGMSFDVTVYVTNPDQSPAENVDVVVTPGNVRGQTKSNGMAKVIVNTEGGARTLEI
IAKTTVPGISDKRQAENKMTAQAYTTKGASTNYLHISVDAAELAIGDQMNINLHFGQSLV
QNQDFTYLILSKGQIVKGERFKRKGQLLVTLSLPVTKDLLPSFRVVAYYHIGSSEVVSDS
IWVDVKDTCMGKLKLDVKESLNVKKLFEPGDEFHLIVTGDPKAKVGLVAVDKAVFVLNKN
RLTQTKIWDIIEKHDTGCTAGSGKDSMGVFYDAGLLFQSDKAGGTTERTAAECPTPPKRK
RRAETLQQITQKLFGKYSEELKKCCADGLRQNRLGYTCERRATFISDGEECVQAFLDCCR
EIQKRKQEQKELLHLARSDEDDEYISSDEIVSRTQFPESWLWDDIDLPACPGNGPCTTTS
LTLAKNYLKDSITTWQVLAISLSTTHGICVADPYEITVAKDFFIDLKLPYSAVRNEQLEI
KAILHNFSNRQQKVRVEFFETEHVCSAASKKKKYRIIVNVDAMSTRAIPYVIIPMELGNR
QIEVQAASSIFHDGVRKTLKVVSEGVLTELPEQNLELNPSREPGGVQVLHLRSSIPPGQV
PNTPANTYITVGGQEVSQTVERVINGDFMGSLIIQPSGCGEQNMARMTLPVTATLYLDAT
KQWEGVGLHRRSEAVQHIRTGYAGELSYRKSDGSYAAYSTTPSSTWLTAYVAKIFALASD
IISVDENVLCSALRWLILNAQMPDGTFKENAPVMSAALVGGVRGGDADVSLTAFVLIALQ
EGNHLCEKSVGSLPEASRKAIEYLEHRLPSLTNPYAVAMSSYALANAGKLNKDRLLQASS
GDGAYWQVAGEHHFSLEATAYALLALVKVKDFTAAGIIVNWLNRQSSPYGSYGTTQATIM
VFQAVAEYYKQAGGHRNVDLDVEVIVSGRSRPVRWSFTKSNIHLTRTDKVQLKQEFNVTA
KGSGAGVLKVYTLYYARPIEKKSDCKNYDLSVKMRKEQEVTYPDAEESYEVIIEVLFKDP
NRDATMSILDIGLLTGFVVDESDLSELTSGRDRYIQMFEMNKQLSERGSLIIYLNKVSHT
VPDRIVFRVHKITNVALLQPAGVTVYEYYSPGGHCVKFYHPTKKDGALNRLCNNQEGLCQ
CAEENCSVQKKLKIDEKSRDKKACEAGMDYVYKVKVLSMDQSPNTDFYEMKIEAVLKEGS
DPDVHGKVRNFMGHANCRESFGFQQGKNYLIMGQSVDLPRIDGKLQYILGEQTWIEYWPT
REEGQTTTYKDTYIGINSLVQMLNEFGCTT
NT seq
4953 nt
NT seq
+upstream
nt +downstream
nt
atgatgaatgtggacgtggtgtggctgacggctgtgcttctctctttccctctgctcacg
ctgtgtgacccactgaatgtcttggtggccccgaacctgctgcgggtaggcacacctgag
agagtgtttgtggaggctcaggattatagtggaaatgacctcaatgtaaaaatcactgtg
aagaaccatccacagaaaactacagaactggcatctgagtctgttgtcctcactgctgct
aacaactaccaggctgttgtagacataacgattcctgacaataaggacttctttagtgag
gacccattggaaaagcagtatgcatacttgcaggctaagtttccttccgccgaactcgag
aaactggtcctgctctccttccagtctggctacatattcgttcaaacagacaagagtatc
tacaccccaggaactcaagtgcgttaccgaatcttctcactgactcctgatctacaacct
gttgaacagactgggggaatctatgtggaaatcataaatcctcaagaaatcacaatcaac
agggaaacattcttcaccaagaaagggactataacaggttcatatgtcatccctgaggtt
gctaaacctggaatatggtccttagttgcgcggtataaaaacacaccacagaagaacttc
actgctgaattcgaagttaaagaatatgtgctcccaagctttgaggttgcattaaaacca
tccaagtccttcttctatgtggatgatcaaaaccttcaagtagacataactgccaagtac
ctttttggaagaaatgtggatggtgttgcatttgtggtgtttggtgttacaaaggataac
aacaaagccacgctgccagcctctttaaaaagagaacaaatcactaatggagagggacgt
gcagtgcttaccagagagatgatccagcagtctttcccaaatattcctgacctggttgga
agctctttgtacatttccgtcagtgttttaacagggactggtagcgaaatggtggaagca
gagaggagggggattcaaatcgtaacatcaccctacaccattcagttcaagcgaacccca
caattttttaaaccaggaatgtcattcgatgtcacggtttatgtgaccaatccggaccag
tctcctgctgaaaatgtggatgtggtggtcacgcccggtaatgtgaggggtcaaaccaag
agtaacggtatggccaaggtcatagtaaacacagagggaggggcaaggactctagaaatc
attgcgaaaaccacagtcccaggcatatcagataaaagacaagctgagaacaagatgaca
gcccaggcctacaccaccaaaggagcctccaccaattacctacatattagtgtagatgct
gcagaactggcaattggtgatcagatgaacatcaatctacatttcggacaaagccttgtc
caaaatcaagattttacttatttgatccttagtaaaggacaaattgtgaaaggggagcgg
tttaagaggaaaggacaattgctcgtgaccttgtctctacccgtcactaaggacctgctt
ccgtcatttcgagtggtggcatattatcacataggatcctctgaggttgtgtcagactct
atttgggttgatgtgaaggacacatgcatgggaaagctgaaactggatgtcaaggaaagt
ttaaatgtcaagaaattatttgagcctggtgatgagtttcatctcatagttactggagat
ccaaaagccaaggttggactggtcgctgttgataaggctgtcttcgtcctcaacaagaac
agactgacacagaccaagatctgggacattattgagaaacatgacactggctgtacagct
ggcagtggtaaagacagtatgggagttttctatgatgcaggtctactgtttcagtctgat
aaagcaggaggcaccactgaaagaacagctgctgagtgtcccaccccaccaaagagaaaa
cggagagctgagactctacaacagatcacccaaaagctatttggtaaatactcagaagaa
ctgaaaaaatgctgtgcggatggactgagacaaaacagactgggttacacatgtgagcga
agagctacgttcatttcggatggtgaagagtgtgtccaggccttcctggactgttgtagg
gagattcaaaaacgcaagcaggagcagaaagaattgctgcatctggctcgcagtgatgaa
gatgatgaatatataagctctgatgaaattgtcagcagaacacagttcccagagagctgg
ctgtgggacgacatcgacctgccagcctgcccaggaaatggaccctgtactacaacaagt
ctcaccttggccaaaaactatctgaaagactcaataactacttggcaagtccttgccatc
agtctctctacaacccatggcatctgtgtggctgatccctatgaaataacagtggcaaaa
gacttttttatagatctcaagttaccttactcagcagtacgcaacgaacaactagaaatc
aaagctattctgcataacttctccaataggcaacagaaggtgcgtgtggaattctttgag
acagagcatgtttgcagcgcagccagcaaaaagaagaaataccgtatcatagttaacgtt
gatgccatgtccaccagagccatcccatatgtgatcattcccatggaactagggaaccgc
cagatagaggtgcaggctgcgagttcaatatttcatgatggagtgaggaaaaccctgaag
gtggtgtctgagggtgtgttaactgaactcccagaacaaaatttggaactgaatccatct
cgagaacctggtggcgttcaagttttgcatttgaggagtagtataccacctgggcaggtt
ccaaacactccagcaaatacttacatcactgtgggtggtcaagaggtgagtcagacagtt
gagcgggtcatcaatggggacttcatggggagtctgatcatacagccatctggctgtgga
gagcagaacatggcccgtatgacactgccagttactgccacactgtacttagatgccacc
aagcagtgggaaggagttggcctgcaccgacgtagtgaggctgtccaacacatccgaaca
ggatatgcaggtgaacttagttaccgtaaaagtgatggctcttatgctgcatattcaacc
acacccagcagcacatggttgacagcttatgtggccaaaatctttgcactggcaagtgac
atcattagcgtagatgaaaatgttctctgcagtgccctccggtggctgatcctgaatgca
cagatgcctgatggcacatttaaagaaaatgctccagtaatgagtgcagcgctagttggt
ggtgtgcgaggtggagatgctgatgtatctctgacagcttttgtcctgattgccctgcaa
gaaggaaaccacctctgtgaaaaatctgtcggaagtcttcctgaagcttccaggaaggcc
attgagtatttggagcatagactcccctctctaacaaatccatatgcagttgctatgtct
tcctatgctttggccaatgctggtaaattaaacaaagatcgcctgctgcaagcttcttca
ggagatggagcctactggcaagttgctggagagcatcacttttctttagaggcaacagcg
tatgccttgctggctctggtaaaagtaaaggattttactgcagcaggaataattgttaac
tggcttaataggcagagtagtccatacgggagttatggcactacgcaggcaaccatcatg
gtgttccaagcagtggctgagtactataagcaagcagggggtcatcggaatgttgacttg
gatgtagaagtgattgtgagtgggcgaagtcgcccagtgagatggagtttcaccaagagc
aatatacatctgacacgcacagacaaggttcagctcaagcaggagtttaacgttactgct
aaagggtctggtgctggagttctaaaagtatatacactttattatgcaaggcccatagaa
aaaaagagtgactgcaaaaactatgatctgtctgttaaaatgagaaaggaacaagaggta
acatatccagatgctgaagaaagctatgaggtcatcattgaagttcttttcaaggatcca
aacagagatgccaccatgagtattttggatattggattgctgacaggatttgtggtggat
gaaagtgatctttcagaactaaccagtgggagggacagatacatacagatgtttgagatg
aataagcagctttcagaacgaggctcactcatcatttatttaaataaggtatcacacact
gtgccagacaggattgttttcagagtgcacaagataaccaacgttgctttgctccaacct
gctggcgtcactgtgtatgagtattactctccaggtggccattgtgtgaagttctaccat
cccacaaaaaaagatggagccctgaacagattgtgcaataaccaagaggggctgtgccaa
tgtgctgaagaaaactgcagtgttcaaaagaaactgaaaattgatgagaaatccagggat
aaaaaagcttgtgaagccggcatggattatgtttataaagtcaaagtactgagcatggac
cagagcccaaacacagatttctatgaaatgaagattgaagccgtcctgaaagaaggttct
gatccagatgtacatggaaaagtgaggaacttcatgggtcatgctaactgtagagagtct
tttggatttcagcaaggcaagaactacctcatcatgggacaaagtgttgacctaccaagg
atagatggaaagttgcagtatatcttgggtgagcagacatggattgaatattggcccaca
agggaagaaggtcaaaccactacatacaaagatacatacatcggcatcaactcactggtt
caaatgcttaatgaatttggatgcactacataa
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integrated database retrieval system
