Clarias gariepinus (North African catfish): 128508077
Help
Entry
128508077 CDS
T10780
Symbol
pde6b
Name
(RefSeq) rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta isoform X1
KO
K13756
rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta [EC:
3.1.4.35
]
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar00230
Purine metabolism
cgar01100
Metabolic pathways
cgar04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
128508077 (pde6b)
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
128508077 (pde6b)
Enzymes [BR:
cgar01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.35 3',5'-cyclic-GMP phosphodiesterase
128508077 (pde6b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDEase_I
GAF
GAF_2
GAF_3
HD-CE
Motif
Other DBs
NCBI-GeneID:
128508077
NCBI-ProteinID:
XP_053335278
LinkDB
All DBs
Position
19:14976584..14986909
Genome browser
AA seq
855 aa
AA seq
DB search
MSVKKEDVEKFLDGNPSFSKSYFAKKLKPGTVASMTGVPESKVDLDSFEMLCQVEEGAIF
FDLIKDMQENVNMEKVIFKILRRLSALIHADRCSLFMYRQRNGIAELATRLFNVNASSKL
EECVVPPDSEIVFPLDIGIVGHVAQSKKTINVKDVKENSYFSTFVDELTEYTTRNILATP
IMNGKDVVAVIMAVNKNNGPHFTDEDEDLFLKYLKVGTLNLKIYHLSYLHNCETRKGQLL
LWSANKVFEELTDIERQFHKALYTVRAYLNCDRYSVGLLDMTKEKEFFDVWPVLMGEQPP
YSGPVTPDGREIIFYKVIDYILHGKEDIKVIPNPPADHWALASGLPTYVAESGFICNIMN
APAEDMFKFQNEALDDSGWTIKNVLSLPIVNKKEEIMGVATFYNRKDGKPFDEQDEQLME
ALTQFLGWSALNTDTYDKMNKLENRKDIAQDMVLYHVKCRDDEIQNILKTREYFGKEPKE
CEEDELRQILKKELPGRNKFEIYEFHFCDFDCSELELVMCGIQMYYEVGVVKKFQVPQEV
LVRFMYSVSKGYRKITYHNWRHGFNVGQTMFTLLTTGQLKRYYTDLEVMAMITAGFLHDI
DHRGTNNLYQVKSQNPLAKLHGSSILERHHLEFGKFLLGDETLNIFQNLNRRQTEHVFHL
IDIAIIATDLALYFKKRTMFQKIVDLSETYEDEKKWVEFLSLETTRKEIVMAMMMTACDL
SAITKPWEVQSKVALSVAAEFWEQGDLERTVLEQQPIPMMDRNKAAELPKLQCGFIDFVC
TFVYKEFSRFHKAIQPMYDGILNNRKEWKALQEAYEAKLKEAEEAAKAKAEELAAKKAAA
TNNPSSSGSKTCSIC
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtcaaaaaagaagatgtggagaagtttttagatggaaacccaagtttctcgaaa
agctactttgcaaaaaagcttaaacctggaactgtggcatccatgacaggagtcccagag
tccaaagtggatttggattcctttgagatgttgtgtcaggtggaggaaggtgcaatattc
tttgatttaatcaaagacatgcaagagaacgtcaacatggagaaggtgatcttcaaaatc
ctaaggcgactcagcgctctgatccatgcggaccgatgcagtctcttcatgtacagacag
aggaatggcatagctgaattggccacacgactgtttaatgtcaacgcttcatcaaagttg
gaagagtgtgtggttccacctgactcagagattgtctttcctcttgatatcggcatagtt
ggtcatgttgctcaatcaaaaaaaaccatcaatgttaaggatgttaaagagaatagctac
ttcagtacatttgttgatgagctgacggaatacacaacccgcaacatcttggctaccccc
atcatgaacggcaaagatgtggtggcggtcatcatggcagtcaataaaaataacggaccc
catttcacagatgaggatgaagatctttttttaaagtatctaaaagttggcacactgaac
ctgaagatctatcacctaagctatctgcacaactgtgagacacgtaaaggccagctgctt
ttgtggtctgctaacaaagtgttcgaagagctcacggatattgagcgtcagtttcacaaa
gctttgtacacagtacgcgcgtacctcaactgtgaccgctactctgtcggtctactggac
atgactaaggaaaaggagttctttgatgtctggcctgttctaatgggagaacaaccacca
tattctggtcctgtcactccagatggcagggaaatcattttctacaaagtcattgactac
attttgcatggaaaggaagacattaaagtcataccaaatccacctgcagaccactgggca
ctggcgagtggactacccacctacgtagcagaaagtggctttatctgcaatatcatgaat
gcaccagcagaggacatgttcaaatttcagaatgaggcacttgatgacagtggatggacc
attaaaaatgtgttgtctctgccaatcgtcaacaaaaaggaagaaattatgggagtggca
actttctacaacaggaaggatggcaagccatttgatgaacaggatgaacaactaatggag
gctttgacccaatttctgggctggtcggcactcaacacagacacctatgacaagatgaat
aaactggaaaacagaaaagacattgcccaagacatggtgctgtaccatgtaaagtgtcga
gatgatgagattcagaatatccttaaaaccagggaatattttggaaaagaaccaaaagaa
tgtgaagaagatgaacttcggcaaatcctgaaaaaagaacttccagggagaaataaattt
gagatatatgagttccacttttgcgactttgactgctcagagctggaattggtgatgtgt
ggcatccaaatgtactatgaagttggtgttgtgaagaagtttcaggtccctcaggaggtt
ttagtacggtttatgtactctgtaagcaagggctacagaaagatcacctatcacaactgg
cgccacggctttaatgttggacaaaccatgtttacattactaacgacagggcagctgaag
cgatactacacagacttggaagtcatggccatgattacggcaggattcctacatgatatt
gaccacagaggcactaataatctttaccaagtgaaatcacaaaatccattagcaaagctt
catgggtcatctattctggagagacatcacttagagtttgggaagtttttacttggagat
gagactttaaacattttccagaacctgaacagaagacaaacagagcacgtttttcatcta
atcgacatcgccattattgcaactgaccttgccttgtatttcaagaagaggactatgttc
cagaaaattgtggatctttctgaaacatatgaggatgagaagaaatgggttgagtttttg
tctttggaaacaacgaggaaggaaattgtaatggccatgatgatgactgcttgtgatctg
tcagccattaccaaaccatgggaagttcagagtaaggtggcactgtctgtagcagctgaa
ttctgggagcagggtgatttagaaaggactgtacttgagcaacaacccattccaatgatg
gacaggaacaaagctgcagaactgcccaagcttcagtgtggttttatagactttgtttgc
acttttgtctacaaggagttttcacggttccacaaggctatccaaccaatgtatgatggc
attcttaacaaccggaaagagtggaaggctttacaggaggcttacgaggcgaagctgaag
gaagctgaagaagcagccaaggcaaaagcagaagaactagctgccaaaaaagcagctgcc
accaataacccatcatcatcaggatcgaagacctgttcaatctgctag
DBGET
integrated database retrieval system
