Clarias gariepinus (North African catfish): 128510609
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Entry
128510609 CDS
T10780
Name
(RefSeq) calcium-responsive transactivator-like isoform X1
KO
K15623
protein SSXT
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
128510609
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cgar03036
]
128510609
Chromosome and associated proteins [BR:
cgar03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
128510609
GBAF(ncBAF) complex
128510609
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
128510609
NCBI-ProteinID:
XP_053339001
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Position
22:3148860..3165577
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AA seq
385 aa
AA seq
DB search
MSVTFSSTRPRGKGDVTQQTIQKMLDENHYLIQCIMDYQSKGKTAECTQYQQILHRNLVY
LATIADSNQNMQSLLPAPPNPGMSVSGGGMGGSGAGGSLHTQSNLNDSMAPSSLMQSQMS
NGPSHTPMQQQQQQQQQSGPSTSSMSSGSSFTHSVPSSSQGTALFPPSRTNLNIQNSQVS
MMHQQGSGPHYSSSGGQHYQGQQTMSMMGQNNQGNSMVSQRPIGNYRPAQQGSQYMGQEE
FYGEQYGHTPSSSEPINQQYYPDGHSEYSYQQSSYGEQSYERSFEDSSQHYYEGGNPQYS
QQQSQYQQSSGQQQTFNQQQYQSQPGYSSQGQAYGPGQGAPSQYSQYQQGQSQQYSSYRS
TQSTPGSQTQRSYTYEQGQYGNYQQ
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgtcagttacattttcatcaacacgaccgagaggaaaaggtgatgtgacccagcagact
atacagaagatgttggatgaaaatcactacctgattcagtgcattatggactatcaaagc
aaaggaaagactgcagagtgcacacagtatcagcagattttacacagaaacctggtttac
ttggccaccatcgcagactccaatcaaaatatgcagtctcttttacctgcgcctccgaac
cctgggatgagtgtgagtggaggtgggatgggaggcagcggtgcaggaggatctctacac
actcagagtaatcttaatgacagcatggctccttcttcactaatgcagagtcagatgagt
aacggcccaagtcacacccccatgcagcagcagcagcaacagcagcagcagtccggccct
tccacctcgtctatgagctctgggtcgagcttcactcactcagtgccctcatcgtcacag
ggcacagcactgttcccgccctcccgcaccaacctcaacatacagaacagccaagtctct
atgatgcatcagcaaggttcaggaccccattactcctcttctggaggtcagcattatcag
ggacagcagaccatgagcatgatgggacaaaataaccaaggcaacagtatggtctcccaa
agacctataggcaactatcgtcctgctcagcaaggatcacagtacatgggtcaggaggaa
ttctacggagagcagtatggacacactccaagctcaagtgagcctataaaccagcagtat
taccctgacggtcacagtgagtactcatatcagcagtcttcttatggagagcagagttat
gagagatcatttgaagactcatcgcaacactattatgaaggcggaaaccctcagtatagc
caacagcagtcacaatatcagcagagctcaggtcagcagcagacattcaaccaacagcag
taccaatcacagccaggatacagcagccaaggacaggcctacggtccgggacagggagct
ccatctcagtactctcagtatcagcagggtcagagtcagcagtattcctcatatcgatcc
acacaatctactcctggctctcaaacacaaagatcttatacttatgaacagggtcagtat
ggaaactaccagcagtaa
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