Clarias gariepinus (North African catfish): 128511416
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Entry
128511416 CDS
T10780
Symbol
ap5b1
Name
(RefSeq) AP-5 complex subunit beta-1
KO
K19022
AP-5 complex subunit beta-1
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cgar03400
]
128511416 (ap5b1)
DNA repair and recombination proteins [BR:
cgar03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
128511416 (ap5b1)
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Gene cluster
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_barrel
AP5B1_C
AP5B1_N
Branch
Motif
Other DBs
NCBI-GeneID:
128511416
NCBI-ProteinID:
XP_053340252
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All DBs
Position
23:5661931..5666834
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AA seq
920 aa
AA seq
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MASWEQRISSFLLSPSQYLSCTTPESFLAELLDKLRDGKAHDSKKILLLSILLEHPTILC
PTMLAGEEVAQELVSILNCIPPKSINLKCHLMLAITNILICTLGLSNRTKVAEEYLHFLF
TLIRDTNDNVGGLSLHSVRATACECLREMETCQPGLLSQKLEALYYLKQQETTVLHQAYS
MLYTQALKNAVWILTQQNDMDNGKLRSVLSGNEGFVWKPAKFAKSLSVAQVPQLPTTLDY
KELKSVTSLLLEESYLMTSPSQGALLRGLVEMVAMVPGISPAIFKSQLLRLFGTTEVELM
HATLFMKGMFTDSLFTAEDEHFLLKRLVGMAQHPLLRIPEKLFYMDCILHFPENRPISSS
GEECLPVLITPQFTLSLFPNVFNDSTTMLCRLNLLCMVHLEANEEEDGQGLRYLIDHMMA
LLRIVDNHGSRESVVTSFRAVYIFLLQFSHMENLSEKLVHQLRELYSRNCHLAPNLINLA
DRIQERLEDSLWPVQLLKALQRCIVEMPPVQLTLQSLGWHLKILARVAQESQITQRSTIC
FLLDILVNSNLCERRSWNVGAAILAVCRNLLQHPTLNQMFIELSDLLQHMSRRYEDTDIQ
DHARFYYTLLTNLSLEKLASILAKAPIGGQMKVRSLSAITASEELGSCLTVLQTESCILE
LIKVHKNGSQDAGPSAEVLSDADLYEFYQEQLKTPGFASEVILMYNLVHANMPDPRFDRI
FTICLHFDVDTMHYSDVNDIYVPCLFRDRKPHSVSVTLKPHHPYPTSLRVSAIFTTEDGQ
SWHTRLPDVKVSFHEIFLPVPLPLGTPLQGKAEVFDRIWDTISLKEPRTSETSLFCFKTG
SEPLADLIEKNFQSYLISRKVNGWKVLFFLPPLYHILLMIREGEDAVQVSIATDNWELLP
HVNSYLQIITAHCSTTTDDV
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcctgggagcagagaatttcctcttttttactaagtccatctcagtatctgtcc
tgcaccacgccggagagctttctagctgaacttcttgacaaactgagggatggcaaagcg
catgacagcaagaagatactcctgctctccatattattggagcatcccacaatcctttgc
ccgaccatgttagcgggagaagaggtggcgcaggagcttgtgtccattctcaactgtatt
ccgcccaaatccattaatctaaaatgccacctcatgttggccatcaccaacattctgata
tgcacgttgggcttgtctaaccgaacaaaagttgcagaggagtatttgcacttcctcttt
acattgattcgggacactaacgataacgtgggtggtctaagtctccactctgtccgagcc
accgcttgcgagtgtcttcgagaaatggaaacctgccaaccaggtcttctgtcacagaag
ctagaagctctttattatctaaagcagcaagaaactactgttttgcaccaggcttactcc
atgctctacacacaggcactcaagaacgcagtctggatattgacccaacaaaacgacatg
gataacggcaagcttaggagcgtcttatctggaaatgaaggatttgtatggaaacctgca
aagtttgcaaagtctttaagcgtggcacaagttccacagctcccaaccacgctggattac
aaagaactgaagtctgtaacatccttgcttttggaggaatcctacttgatgacgtctcca
tcgcagggtgccctgctgcgaggactcgtcgagatggtggcgatggtaccaggcatctct
ccggccatatttaagtctcagctgctcaggcttttcgggacgaccgaggtggagctgatg
cacgccacgctgtttatgaaaggcatgttcaccgacagcctcttcactgctgaggatgag
catttcttgcttaaacgactagttggcatggcgcaacatcccctgcttagaattccagag
aagctcttttacatggactgcattcttcactttcccgagaacagacccatatctagcagt
ggagaggaatgcttacccgttctcattacacctcagtttactctatccctcttccctaat
gtgttcaacgacagtaccacaatgctctgtagactgaaccttctctgcatggtgcatctc
gaggcaaatgaggaagaggacggccaaggtctgagatatttaattgatcacatgatggcc
ctgctcagaatagtagacaatcatgggagcagagaatctgtggtgacgtctttcagagca
gtttacattttcctcctgcaattcagccatatggagaacctctcagagaaacttgtccac
cagttacgtgagctgtactccagaaactgtcaccttgcgccaaatctgatcaaccttgca
gatcgaatccaggaacgcttggaggattcgctttggccagtccagctgttaaaggcactt
caaaggtgcatagtggaaatgcctcctgtgcaactgacccttcagagtttgggctggcac
ctaaaaatcttggctcgagtcgcacaggagagtcagattacccagagaagtactatttgc
ttccttcttgacatcctcgtcaattccaacctttgtgaaagaaggagctggaatgtcggc
gccgccattctcgcggtatgccgtaacttgctccagcaccctactctcaaccagatgttc
atcgaactctcagatctcctgcagcacatgtccaggcgttatgaggacacggatattcaa
gaccacgcccggttctactacacccttcttactaacttgtccttggaaaaacttgcaagc
atccttgccaaggcacctataggaggacagatgaaagtgcgatctttgtcagccatcact
gcaagtgaagaacttggcagttgtttgacggttcttcagactgagagttgtatcctcgag
cttataaaagttcacaaaaatggttctcaggatgcaggtccaagtgccgaagtcctgagt
gatgcagacttatatgagttttaccaggagcaactgaaaaccccaggctttgcctcagag
gtcattttgatgtacaacctcgttcatgctaacatgccggatcctagattcgatcgaatc
ttcaccatatgccttcattttgacgttgacactatgcactattcggatgtaaatgacatc
tacgtgccgtgcctttttagagacaggaagccgcatagcgtcagcgtgacgctgaagccg
catcatccatacccgacgagtttacgagtaagtgccattttcaccacggaagatggccag
tcttggcacactcgcttaccagacgttaaagtttcgttccatgagatatttcttcccgtg
cctttacccctagggacaccacttcagggcaaagcagaggtgtttgaccggatttgggac
actatatccttaaaggaacctagaacttcagagacaagcctgttctgttttaagactgga
agtgaacctcttgcggatctgattgagaagaatttccaaagttatctgatttcacgaaaa
gtaaatgggtggaaggttctgtttttccttccgccgctttatcacattttattgatgatc
agagagggtgaggacgctgttcaggtcagcatcgctacagacaactgggaactgctgccc
catgtcaactcctacttacaaatcataaccgcacactgcagcacgacaaccgatgatgtt
tga
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