Clarias gariepinus (North African catfish): 128511905
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Entry
128511905 CDS
T10780
Symbol
brwd3
Name
(RefSeq) bromodomain and WD repeat-containing protein 3 isoform X1
KO
K11798
bromodomain and WD repeat domain containing protein 1/3
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgar04121
]
128511905 (brwd3)
Ubiquitin system [BR:
cgar04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
128511905 (brwd3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Bromodomain
WD40_CDC20-Fz
EIF3I
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_EML
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_DCAF12
Beta-prop_IFT122_1st
Beta-prop_SCAP
Beta-prop_IFT140_1st
ANAPC4_WD40
NBCH_WD40
Beta-prop_SPT8
Beta-prop_DCAF4
WDR90_beta-prop_4th
Motif
Other DBs
NCBI-GeneID:
128511905
NCBI-ProteinID:
XP_053340912
LinkDB
All DBs
Position
24:24526820..24543704
Genome browser
AA seq
1776 aa
AA seq
DB search
MASEPRSQTEAELYFLIVRFLQAGPCKKSAQILREELEQYEIIPERWSWDGKRYRRNFQD
WVALNQHIPADFLLRVCEQLCPLLDTHVPPSVPGLRSLLGSGRQSLLRTAKSSSHTVWTG
SAVAALHRGRPPEPPINLPKPPNIVSILGGRQATGAARLGHALPSCTYQHMKMHRRILGH
LSSVYCVAFDRTGRRIFTGSDDCLVKIWATDDGRLLSTLRGHAAEIADMAVNYENTLIAS
ASCDKIIRVWCLRTCAPITVLQTHTASITSIQFSPSSLGSTRYLASTGADGMVCFWQWNS
LTMKFSDRPVKFAERSRPGVQISCCSFSTGGMFLATGGTDHVIRVYYLGGETPVKLSDLD
SHTDKVVAVQFCNNNDSLRFVSGSRDGTARIWHYQQQEWKSLMLDMSTKLPGSSTASGED
KTTKLVVTMVAWDRSDRTVVTAVSNLLLKVWSSTNGQLLHVLSGHDDEVFVLEPHPFDSR
IMLSAGHDGNIYIWDLSKGGKIRNFFNMIEGQGHGAVFDCKFSADGQHFACTDSHGHLLV
FGFGCSKPYEKIPDQMFFHTDYRPLIRDSNNYVLDEQTQQAPHLMPPPFLVDVDGNPHPP
SFQRLVPGRENCKEEQLVPQLGYMANGDGEVVEQVIGQQTADEGQEESPLDNLIRQLQHQ
QDEQLNSGNQAAGGEEAGGPLSPPNVGLRRSGQVEGVRQMHNNAPRSQMATERDLLAWSR
RVVVNEIPSGVFRKMEESRQAKGELERSLYNMERKKKPVHATRTDPVDVSGRSLRRPQRK
QQQKRHAYHTRSARERRRAHTLTDTRQDSLSESDSEAEQEEDQNENSDASSEGESQWENA
SSSSDSSSEYSDWTADAGINLQPPKRRPTRRPARIAGSSSSEDEGEGQREGEERRKKKKE
EEEEEEEEKKKKKPKQTKQKTVPAGELEEWLPPPWIMETVPRRSPFLPQMGDELIYFRQG
HQAYVRAVRRAKAYSINPQKQPCNRLDLRDQEYVKVVGIKYEVGPPTLCCLKLAFLDELS
EKMTGDSFSLKYHDMPDVIDFLVLQQFYNEAKERNWQPGQRFRSIIDDAWWFGSLESQQP
YQPEYPDSLFQCYAVRWDNSEREKMSPWDMEPIPEGAPLPDEVGDSVPVTEEELQALLYQ
PQDGEWGAHTRDEECERVIHAIDQLFTLDIAKAFTCPVDLRDYPLYCTVVAYPTDLSTIR
LRLVQRFYRRISALMWEVRYIEHNARTFNEPHSPIVTAAKAVTDVLLHFIGDQSCTDILE
LYNKLKMELSSAAEEEEDVEVDSDTPGTSTGQKSSQTRGVVLDVRAWYTQCKDLIQRMIA
SPDSEPFRQPVDLFTYPDYRDIIDTPMDLGTVMETLMGGNYENPMEFSKDVRLIFSNSKA
YTPNKKSRIYSMTLSLSAFFEHQIISIISDYKVALQNQRRCQQRLSYSKRLLNSTPESPK
GKPKSVKKTPQQQQPRPQRSSLYEDSNDEDSQPSSSSQSAPPSSLSAQPSSNRVTRSRAL
SKRADAHCNGPMTNGGRRSRRRPGQTDTSDSESSESSSSSSSSSSSSSSSSESEASDAEV
ASFAEGGDHDYSKASRLSLARKSKMPDTNFPSIAKRKRRGQEEETNACLKRPRREQTPVQ
ESQSEDEDEDEDEDEGEVEDEENEEVEEEEPGEEGAEEGEEEGEEPEDEEEGEEEGEELG
EEEEEEPEDEDEEDDEEDETCQRPQLPARGQRSSQRTVKAGRINTRNQGRRTIVYNDDSE
YDAPAADPLNLGTSRSGRIRRMTERARVSHLMGWSH
NT seq
5331 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcggaaccccgctctcagactgaagccgaactctacttcctgatagtgaggttt
ctccaggcgggaccgtgtaagaaatcagcgcagatcctgcgcgaggagctggagcagtat
gagatcatccctgagcgctggagttgggacggaaagcgctacaggagaaacttccaggac
tgggtggcactgaatcagcacatcccagcagatttcctgttgcgtgtgtgtgagcagttg
tgtccgttgctggacacacacgtccccccgagcgtccccggactccgcagcctcttggga
agcggccgccagtctctactgcgcactgccaagagttcttctcacacagtatggacgggt
tctgctgtagccgctttgcacagggggcggccccccgaaccaccaatcaacttacccaag
ccgccaaatattgtgtcaatcttgggcggtcgccaagcaaccggggcggcccgtctgggc
cacgccctcccgtcctgcacctaccagcacatgaagatgcacaggaggattctgggacat
ttgtcctcggtgtactgtgtggccttcgaccgaacgggacgacgcatctttacgggttca
gacgactgcctggtgaagatctgggcgacagatgacgggcgtctcctgtcgactctgcgc
ggtcacgcggccgagatcgcagacatggcggtgaattacgagaacacgctgatcgcttcg
gccagctgcgacaagatcatccgcgtgtggtgtctccggacctgcgctcccatcaccgtc
ctgcagacacacaccgcctccatcacctccatccagttctctccatcctctttgggttcg
acgcgctatctggcctcgactggagccgatggaatggtctgcttctggcagtggaacagc
ctcaccatgaaattctcagacaggccagtaaagttcgcagagcggtctcgtcccggggtc
cagatatcctgctgctcctttagtactggtgggatgttccttgccaccggagggacagat
catgtgatcagggtgtattacctgggtggggagactcctgtgaagttgtcggacctggac
tcgcacacggacaaagtggtggccgtgcagttctgcaacaacaacgacagtctccgcttt
gtgagcggcagtcgggacgggacagcgcggatctggcactaccagcaacaggagtggaag
agcctcatgctagacatgagcaccaaactgcctgggagctccactgcatcaggggaggac
aagaccaccaagctggtggttaccatggtagcatgggaccgcagtgaccgaacagtcgtc
accgccgtctccaacttactcctcaaagtctggagctccacaaacggccagctgctccac
gtgctctctggtcacgacgatgaggtctttgtgctggagccacacccattcgactcgcgc
atcatgctgtcggccggccacgacggaaacatctacatctgggacctcagcaagggcggc
aaaatccgcaacttcttcaacatgatcgaaggtcagggtcacggcgcggttttcgactgc
aagttctcggccgacgggcagcactttgcctgcacggactcgcacggccacctgctcgtc
ttcggcttcggctgcagcaaaccctacgagaagattccagatcagatgttcttccacacg
gactaccggccgctgatccgggactccaataactacgtcctggacgagcagacgcaacag
gcgccgcacctgatgccaccgccgttcctggtggacgtggacgggaacccgcaccctccg
agcttccagcgcctcgtcccgggacgagagaactgcaaggaggagcagctggtgcctcag
ctaggctacatggctaacggtgacggagaggtggtggagcaggtgatcggccagcagacg
gcggatgagggtcaagaagagagcccgttggacaatttgatccggcaacttcagcaccag
caggacgagcaactcaactcaggaaaccaggccgcaggcggcgaggaagcaggcggtcca
ctgtcgccccctaatgtcggactgcggcgtagcggtcaggtggaaggcgttcggcagatg
cacaacaacgccccccgcagtcagatggccacagagagggacctgctcgcgtggagccgc
cgcgtggtcgtcaacgaaatcccctcaggagtcttcaggaaaatggaggagagtcgacag
gctaaaggagaactggagcgatcgctttacaacatggagaggaagaaaaaacctgtccat
gctactcgaacggaccctgttgacgtttcggggcgctctctgcggagacctcagagaaaa
cagcagcagaagagacacgcgtatcacacacggtcggcgcgggagaggagacgagcacac
acactcaccgacacgcgtcaggacagcctcagcgagtcagacagcgaggcagagcaggag
gaagatcagaacgagaactctgacgcttcctctgaaggagaatctcagtgggagaacgcc
agcagctcaagcgactcctccagcgagtattccgattggacggcggacgcgggcatcaac
ctccagccgcccaaacggcgaccaaccagaaggccggcccgtatcgccgggagcagcagc
tctgaggacgagggggaggggcagagagagggggaggagcgtcgcaagaagaagaaggaa
gaggaggaggaggaggaagaggagaagaagaaaaagaaacccaaacaaacgaaacagaaa
acggttcctgctggtgagcttgaagagtggcttcccccgccctggataatggagacggta
cccaggcgatctccgtttctacctcagatgggagacgagttgatatatttccggcagggt
caccaggcgtacgttcgagcggtgcgtcgtgccaaagcttacagcattaaccctcagaaa
cagccctgtaacagactggacctcagggatcaggagtatgtgaaggtggtgggtataaag
tatgaggtgggcccacccacgctctgctgcctcaaactggccttcctggacgagctctcg
gagaagatgaccggcgactcctttagcttgaagtatcacgacatgcctgatgtcatcgat
ttcctggtgctacaacagttttacaacgaggccaaagaacgcaactggcaaccgggtcag
cgtttcaggagtattatagacgatgcctggtggttcgggtcactggagagtcagcagccg
taccagcccgagtatcccgacagccttttccagtgctacgctgtcaggtgggacaacagt
gagagagagaaaatgagcccctgggacatggaacccatacctgagggagctccgctccca
gacgaggtcggcgacagcgtcccagtaacggaggaggagcttcaggctctcctgtaccaa
ccacaggacggcgagtggggtgcacacacacgtgacgaggagtgtgagagagtcattcac
gccatagaccagcttttcacactggacatagcgaaggcgttcacgtgtccggtggacctg
agggattatcctctgtactgcaccgtggtggcgtaccccactgacctcagtacaattaga
ctgagactggtacagcgcttctacaggaggatttcggcgctgatgtgggaggtgcgttac
atcgagcacaacgccaggacgtttaacgagccgcacagccccatcgtcacagcggctaaa
gccgtcaccgacgtcctgctgcactttatcggcgatcagagctgtactgatatcctggag
ctgtacaataagctcaagatggagctcagcagcgctgctgaagaagaggaggacgttgag
gtcgactctgacactccgggaacatcaactggccagaagtcgtcacagacgcggggcgtg
gtgctggacgtgcgagcgtggtacactcagtgtaaagacctgatacagaggatgatcgcc
agcccggactccgagcccttccgccaacccgtcgacctcttcacctacccggactacagg
gacatcatagacacaccgatggacctggggacggtgatggagactctgatgggggggaac
tacgagaatcccatggagttctccaaggacgtccggctcatcttcagcaactccaaagcg
tacacgcctaacaagaagtcccggatttacagcatgactctgagtctgtctgcgttcttc
gagcatcagatcatctccatcatctccgattacaaggtggccttgcagaaccagagacgc
tgccagcaaagactcagctacagcaagagactgctgaactccacgccagagagcccgaaa
gggaagcccaagtcagtgaagaaaacgccgcagcagcagcagccccgcccacaacgttcc
tctctgtatgaagactcaaatgatgaagacagtcagccctcatcttcctcacagtcagca
ccgccgtcctcactgtcggctcaaccgtcgagtaaccgagtcacccgcagcagagctctg
agcaagagagcagacgctcactgcaacggccctatgaccaacggaggtcgaaggtcacgc
agacgaccgggacaaacggacacctcggactccgaaagctcggaatcgtcgtcgtcgtct
tcttcctcctcatcttcgtcgtcctcttcctctgagagcgaggcgagcgacgccgaggtg
gccagcttcgccgagggcggagatcacgactacagcaaagcctcgcggctctccctggca
cgcaagagcaagatgcccgacactaactttccctcgatcgccaaacgaaaacgaaggggg
caggaagaggagacaaacgcgtgtctcaaacgtccacgtagggaacagacaccggtccaa
gagagtcagagcgaggatgaggatgaggacgaggatgaagatgaaggtgaagttgaggat
gaggaaaacgaagaggtagaagaggaggagcctggggaggaaggagcagaagaaggcgaa
gaagaaggggaggagccagaagatgaagaagaaggagaagaagaaggggaggagctagga
gaagaagaggaggaggagccagaagatgaggatgaagaagatgatgaggaagatgaaaca
tgtcaacgacctcagcttcctgccaggggtcaaaggtcgagtcagaggacggtgaaagcg
gggcgtataaacacccgtaaccaggggagacggaccatagtctataacgacgactcggag
tatgacgctcccgccgctgacccgctcaatctgggcacgtcgcgttcaggaagaatccga
cgtatgaccgagagagccagggtcagccacctgatgggctggtcacactga
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integrated database retrieval system
