Clarias gariepinus (North African catfish): 128512180
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Entry
128512180 CDS
T10780
Name
(RefSeq) polyubiquitin-C
KO
K08770
ubiquitin C
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar03320
PPAR signaling pathway
cgar04120
Ubiquitin mediated proteolysis
cgar04137
Mitophagy - animal
cgar04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
128512180
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
128512180
04137 Mitophagy - animal
128512180
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
128512180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgar04121
]
128512180
Ubiquitin system [BR:
cgar04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
128512180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Ubiquitin_2
DUF2604
Rad60-SLD_2
TBK1_ULD
Ubiquitin_5
Motif
Other DBs
NCBI-GeneID:
128512180
NCBI-ProteinID:
XP_053341308
LinkDB
All DBs
Position
24:7138263..7141249
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AA seq
685 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA
KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKT
ITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLR
LRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL
SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIE
NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTL
TGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLH
LVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLED
GRTLSDYNIQKESTLHLVLRLRGGQ
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcttcgtgaagacccttactggcaagaccatcaccctcgaggttgagccaagt
gacaccatcgagaatgtgaaggccaagatccaggacaaagaaggcattcccccagaccag
cagaggctgatctttgctggcaaacagctggaagatggccgcacattgtccgactacaat
atccagaaggagtccaccctccacctggtgctgcgtctgaggggcggcatgcagatcttc
gtgaagaccttaactggcaagaccattaccctggaggtcgaaccaagtgacaccattgag
aacgtaaaggccaagatccaggacaaagaaggcattcccccagaccagcagaggctgatc
tttgctggcaagcagctggaagatggccgcaccctatccgactacaacatccagaaggag
tccactctccacctagtgctgcgtctgaggggcggcatgcagatctttgtgaaaacccta
actggcaagaccatcaccctcgaggttgagccaagtgacaccatcgagaatgtgaaggcc
aagatccaggacaaagaaggcattcccccagaccagcagaggctgatctttgctggcaaa
cagctggaagatggccgcacattgtccgactacaatatccagaaggagtccaccctccac
ctggtgctgcgtctgaggggcggcatgcagatcttcgtgaagaccttaactggcaagacc
attaccctggaggtcgaaccaagtgacaccattgagaacgtaaaggccaagatccaggac
aaagaaggcattcccccagaccagcagaggctgatctttgctggcaagcagctggaagat
ggccgcaccctatccgactacaacatccagaaggagtccactctccacctagtgctgcgt
ctgaggggcggcatgcagatctttgtgaaaaccctaactggcaagaccatcaccctcgag
gttgagccaagtgacaccatcgagaacgtgaaggccaagatccaggacaaagaaggcatt
cccccagaccagcagaggctgatctttgctggcaaacagctggaagatggccgcacattg
tccgactacaatatccagaaggagtccaccctccacctggtgctgcgtctgaggggcggc
atgcagatcttcgtgaagaccttaactggcaagaccattaccctggaggtcgaaccaagt
gacaccattgagaacgtaaaggccaagatccaggacaaagaaggcattcccccagaccag
cagaggctgatctttgctggcaagcagctggaagatggccgcaccctatccgactacaac
atccagaaggagtccactctccacctagtgctgcgtctgaggggcggcatgcagatcttt
gtgaaaactctaactggcaagaccatcaccctcgaggttgagccaagcgacaccattgag
aacgtaaaggccaagatccaggacaaagaaggcattcccccagaccagcagaggctgatc
tttgctggcaagcagctggaagatggccgcaccctctccgactacaacatccaaaaggaa
tccaccctccacctggtgctgcgtctgaggggcggcatgcagatcttcgtaaagacatta
actggcaagaccatcaccctggaggttgaaccaagtgacaccattgagaacgtaaaggcc
aagatccaggacaaagaaggcattcccccagaccagcagaggctaatctttgctggaaag
cagctggaagatggccgcaccctgtctgactacaacattcagaaggagtccacccttcac
ctggtgctgcgtctgaggggcggcatgcagatctttgtgaagaccttgactggcaagacc
atcaccctggaggttgaaccaagcgacaccattgagaacgtaaaggccaagatccaggac
aaagaaggcattcccccagaccagcagaggctgatctttgctggcaagcagctagaagat
ggtcgcaccctgtctgactacaacatccaaaaggaatccaccctccacctggtgctgcgt
ctgagaggtggacagtaa
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