Clarias gariepinus (North African catfish): 128512410
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Entry
128512410 CDS
T10780
Name
(RefSeq) gamma-aminobutyric acid receptor subunit rho-1-like
KO
K05190
gamma-aminobutyric acid receptor subunit rho
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04080
Neuroactive ligand-receptor interaction
cgar04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
128512410
04082 Neuroactive ligand signaling
128512410
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cgar04040
]
128512410
Ion channels [BR:
cgar04040
]
Ligand-gated channels
GABA-A
128512410
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
AfaD
Ig_GpJ_C
Motif
Other DBs
NCBI-GeneID:
128512410
NCBI-ProteinID:
XP_053341653
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All DBs
Position
2:41416585..41424684
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AA seq
394 aa
AA seq
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MRPGFGGPAVPVGVDVQVESLDTISEVDMDFTMTLYLRHYWKDERLSYAGKTNQSMTFDS
RLVKKIWVPDMFFVHSKRSFIHDTTTDNVMLRVYPDGKVLYSVRVTVTAMCNMDLSHFPL
DTQTCSLEIESYAYTDDDLMLYWKKGNDSLKTDDKISLSQFLIQEFHTTTKLAFYSSTGW
YNRLYITFTLRRHIFFFLLQTYFPATLMVMLSWVSFWIDRRAVPARVPLGITTVLTMSTI
ITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVIEYAAVNYLSTLQERRERKLRERLPCTC
GMSHAGHVMMSSSYSEMDTMTTGHYGVSEVNGDKREHMLVQLAMDKERGANSRVGKSRPY
VSLWIDTHAIDKYSRVIFPGAYTLFNIIYWSIYS
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgcggcctggttttggaggcccagctgttcctgtgggtgtggatgtacaagttgaaagc
ctggacactatctctgaagtggatatggacttcaccatgactctgtacctgaggcactat
tggaaagacgagcgcctgtcctacgcaggaaagaccaaccagagcatgactttcgatagc
cggttagtaaagaagatctgggtccctgacatgttcttcgtccactccaaacgctccttc
atccacgatacgacaacggacaacgtcatgctcagggtttatcccgatggcaaagtactc
tacagcgtcagggtcacggtcacagctatgtgtaacatggacctcagccactttcctctt
gacactcaaacatgctcgctggagatcgaaagctacgcgtacacagacgatgatctgatg
ctgtactggaagaaagggaacgactcgctgaagacagatgacaagatctcactctctcag
ttcctcattcaggagtttcacaccaccaccaaactggctttctacagcagcacaggttgg
tacaaccgcctgtacatcaccttcaccctgagacgtcacattttcttcttcctgctgcag
acctactttcccgccactctgatggtcatgctgtcctgggtgtccttctggatcgaccgc
cgtgccgtccctgccagggtccctcttggcatcaccacggtgctcaccatgtccaccatc
atcacaggtgtaaatgcgtccatgcccagagtgtcctatatcaaagccgtagacatttac
ctctgggtcagcttcgtcttcgtcttcctttccgtcatcgagtacgcggctgtcaactac
ctgtccactctgcaggagcgcagagagaggaagctcagagagaggctgccgtgcacatgc
gggatgtctcacgcaggccacgtgatgatgagcagcagctacagcgagatggacaccatg
actacaggtcattacggcgtgtccgaggtgaacggagacaagcgcgagcacatgctggtg
cagttggccatggacaaggagcgtggcgctaacagccgagtcggaaagtcccgcccctac
gtcagcctctggatcgacacgcacgccatagacaagtactcgcgtgtgatctttcccgga
gcttacactctcttcaacatcatatactggtccatttattcctaa
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