Clarias gariepinus (North African catfish): 128513933
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Entry
128513933 CDS
T10780
Symbol
phf1
Name
(RefSeq) PHD finger protein 1
KO
K11467
PHD finger protein 1
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
128513933 (phf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgar03000
]
128513933 (phf1)
03036 Chromosome and associated proteins [BR:
cgar03036
]
128513933 (phf1)
Transcription factors [BR:
cgar03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
128513933 (phf1)
Chromosome and associated proteins [BR:
cgar03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
128513933 (phf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tudor_2
PHD
Mtf2_C
PHD_ash2p_like
PHD_2
ASH2L-like_WH
Chromo
DUF4537
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
128513933
NCBI-ProteinID:
XP_053343478
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All DBs
Position
26:1412695..1434930
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AA seq
515 aa
AA seq
DB search
MLGDPARLSRMGVVTEGEDVLARWSDGLLYLGNVKRVDVVKQCCLVRFEDNSEFWVLRKD
IQSFSASGEEVCCVCDGPPLKEPLVICLKCRHCYHAQCHTPAIDPEMDSDTWICRQCVFA
VATKRGGALKRGRFARLMQLMKMRLPYQLSTLDWDAQHLTNQQQCYCYCAGPGEWNLKML
QCGSCGQWFHEACTQCLTKPLLYGDRFYHFQCSVCTNGPETIQRLPMTWVDLAHLVLYHL
SLCCKRKYFDFDHEIMAFTNENWDSLLLGTLSDTPKQDRCHNLLNALNSHKDRFVSGKEI
KKKKCLFGLQVRAPPPLSSDSSPLITEQPINITHRKSPLSLPCQRRPVGSESRKSKRRIT
ETLQQPCPPANQINLVPCCHGCVNGASVYNSRKSEEELALGSPPKRMFSLYHPSYNGSQG
LPRTLHHYSAEDPCRLPAPCLPFSMSSSQPPGQRFEQCPSLFLRDVAPYPNGVNLEGHTA
ARGWGGGEAVRILARRITPDGKVQYLVEWGNVRVY
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgctcggtgaccccgcgcgactttccaggatgggcgtggtcactgaaggagaagacgtc
ttagcaagatggagcgatggacttttatacctcggcaacgtcaaaagagtagacgtcgtc
aaacagtgctgtttggtcagattcgaggataattcagagttctgggtcctcaggaaagac
attcagtcattctcagccagtggagaggaagtgtgttgtgtctgcgacggtcctcctctt
aaagagccactcgtaatctgtctgaaatgccgccactgttatcatgctcagtgccatact
ccggccatcgaccctgagatggacagcgacacctggatctgtcgccagtgcgtctttgcc
gtcgccaccaagaggggcggagccttaaaacgaggacgcttcgctcgactcatgcagttg
atgaagatgaggctgccctatcagctttccactctggactgggacgctcagcatctgacc
aatcagcagcagtgttactgctactgcgccggaccaggagagtggaacctgaagatgctg
cagtgtggcagttgtggccagtggttccacgaagcctgcactcagtgcctgaccaaacct
ctgctctacggggacaggttttatcactttcagtgttcagtatgtacgaatggaccagag
accattcagagacttccaatgacctgggtagatttggctcatttggtgctgtatcatctg
tccctgtgctgcaagaggaaatactttgattttgatcatgaaataatggccttcaccaac
gagaactgggattcgttgctgttaggcacgctgtcagatacgcccaagcaggaccgctgt
cacaatctgctcaatgcattgaattcccacaaggacaggttcgtgtcggggaaagagatc
aagaagaagaagtgtctctttggcctacaagtgcgagctccgccgccgctgtcatccgat
tcctcacccctcatcaccgagcagcccatcaacatcacgcaccgcaaaagtccgctgtca
ctgccgtgccagagacgaccggtgggctccgagtctcgcaaatcaaagcggcgcatcaca
gagacacttcagcagccatgtccaccagcgaaccagatcaatctagtgccctgctgtcac
ggctgtgtgaacggcgcgagcgtctacaactcccggaaatccgaggaggaattagcgctg
gggtcacctcctaagagaatgttctctctctatcacccgtcgtataacggatctcagggt
ctgcctcgaacgctgcatcactacagtgccgaggacccttgtcggcttcccgcgccctgt
ctccccttttccatgtcgtctagtcagccaccagggcagaggtttgaacagtgcccatct
ctgttcctgcgcgacgtcgccccctaccccaacggcgtgaacttggaagggcacacggca
gcgcgaggctggggcggaggcgaggccgtgaggatcctggccaggcgcattacgccggac
ggaaaggtccagtacctggtggagtggggaaatgtccgagtttattag
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