Clarias gariepinus (North African catfish): 128514664
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Entry
128514664 CDS
T10780
Symbol
crnkl1
Name
(RefSeq) crooked neck-like protein 1
KO
K12869
crooked neck
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
128514664 (crnkl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cgar03041
]
128514664 (crnkl1)
03036 Chromosome and associated proteins [BR:
cgar03036
]
128514664 (crnkl1)
Spliceosome [BR:
cgar03041
]
Complex B
Other components
Prp19-related factors
128514664 (crnkl1)
Complex C
128514664 (crnkl1)
Chromosome and associated proteins [BR:
cgar03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
128514664 (crnkl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT_PRP39_N
HAT
HAT_Syf1_CNRKL1_C
TPR_14
Suf
TPR_19
TPR_CcmH_CycH
TPR_17
U3_assoc_6
Mad3_BUB1_I
Motif
Other DBs
NCBI-GeneID:
128514664
NCBI-ProteinID:
XP_053344435
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All DBs
Position
27:complement(14444726..14452436)
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AA seq
740 aa
AA seq
DB search
MASTAAGKQRIPKVAKVKNKAPAEVQITAEQLLREAKERELELLPPPPKQKITDEEELND
YKLRKRKGFEDNIRKNRTVITNWIKYAQWEESLKEIQRARSIYERALDVDHRNVTLWLKY
AEMEMKSRQVNHARNIWDRAITILPRVNQFWYKYTYMEEMLGNVTGCRQVFERWMEWEPE
EQAWHSYINFELRYKEVEKARCIYERFVIVHPVVKNWIKYARFEDKHGYIAHARKVYERA
VEFFGEEHIDENLFVAFAKFEEKQKEFERVRVIYKYALDRIPKHQAQELFKNYTVFEKRF
GDRRGIEDVIVSKRRFQYEEEVKANPHNYDAWFDYLRLVESDADADTVREVYERAIANVP
PITEKRHWRRYIYLWINYALYEELEVKDPERTRQVYQACLELIPHKKFTFAKIWLLYGQF
EVRQKNLQNARRGLGTGIGKCPKNKLFKGYIELELQLREFDRCRKLYEKYLEFSPENCTT
WIKFAELETILGDAERARAIFELAISQPRLDMPEVLWKSYIDFEIEQEEYENTRGLYKRL
LQRTQHVKVWISYAQFELSIEGEERLQRCRQVYEEANRGLRTCEEKEERLMLLEAWKDFE
QEFGTVTNNDRVKKLMPEKVKKRRKLTAEDGSDAGWEEYYDYIFPEDAANQPNLKLLAMA
KMWKKQQQQDEPQEEEETEKDEDGQAAQPRDEQEDTGKTQEPKENVCDDQDDSDSSSESE
SDEEETGDKTEEKTNPPEES
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccacggcggcaggaaagcagagaataccgaaggtggcaaaggtgaagaataaa
gccccggctgaggtgcagatcacagctgaacagctactccgagaagccaaggagcgagaa
ctcgagctactcccccctccccccaaacagaagatcactgatgaggaggagttgaacgat
tacaagttgcggaaacgcaagggattcgaagataatatcagaaaaaacaggaccgtcata
accaactggatcaagtacgcacaatgggaggaaagtctaaaggaaattcaaagagctcgg
tctatctacgagcgagcgctggatgtggatcaccggaatgtcacgctgtggctgaaatac
gcagaaatggagatgaagagtcgacaggtcaatcacgcccgcaacatctgggaccgagcc
ataaccatcctgccccgagtcaaccagttctggtacaaatatacctacatggaggagatg
ctgggaaacgtaacaggctgcagacaggtgtttgagcgctggatggagtgggagccagaa
gagcaggcctggcactcttacatcaactttgagctgcgctataaggaggtggagaaagcc
cgctgcatttatgagagatttgtgatcgtccaccctgtggtgaagaactggatcaaatac
gcccgctttgaagataaacacggttacattgctcatgccagaaaagtttacgagagggcc
gttgagttcttcggtgaggaacacatcgatgaaaacctctttgtggcttttgctaaattc
gaggagaaacagaaagagtttgagcgtgttcgagtgatctataagtacgccctggacaga
atccctaaacatcaggcccaggagctttttaagaactacacagtgtttgagaaaaggttt
ggagacaggagaggaatcgaggatgtcattgtcagcaagcggagatttcagtatgaggag
gaggttaaggcgaacccacacaactacgacgcctggttcgattacttgcggctggtggag
agcgatgcagacgccgacacggtccgagaggtgtacgaacgagccatcgccaacgtccct
cccatcacagagaagagacactggaggcgctacatttacctgtggatcaactacgctctt
tatgaggagttggaagttaaggatcctgaaagaacaaggcaggtgtatcaggcatgtctg
gagctcatccctcacaaaaagtttaccttcgctaaaatctggctgctctacggccagttt
gaagttcgccagaagaacctgcagaatgccagacgaggcctgggcacaggcattgggaaa
tgtccgaagaacaagttgtttaagggctacatcgagctggagctgcagctcagggagttt
gatcgctgcaggaagctgtacgagaagtacctggagttcagcccggagaactgcaccacc
tggatcaagtttgccgagctggagacgatcctgggagatgcagaaagagcgcgagccata
ttcgagctggccatcagtcagcctcgcctcgacatgcctgaggtgctctggaagtcatat
attgactttgaaatcgagcaggaggaatacgagaacacacgtggactttataagaggctc
ttgcaacgcacacaacatgtcaaggtatggatcagttacgctcagtttgagctgtcgatt
gaaggcgaggagcgactgcagcggtgcaggcaggtctacgaggaagctaaccgtggcctg
cgcacatgcgaggagaaggaggagaggcttatgcttctcgaggcctggaaggattttgag
caggagttcggcacagtgaccaacaacgacagagtgaagaagcttatgcccgagaaggtg
aagaagaggaggaagctcacggcagaggatgggtcggacgcaggatgggaggaatattac
gactacatcttcccagaggatgctgccaaccagcccaatctcaaactcttggcgatggcc
aagatgtggaagaagcaacaacagcaggatgagcctcaggaggaagaagagacggaaaag
gatgaagatggccaagctgctcagccaagagacgagcaggaggatactggcaaaacacag
gagcctaaagagaatgtgtgtgacgaccaggatgacagcgacagcagcagtgagagtgaa
agtgatgaggaggaaactggagacaaaacagaggagaaaacaaatcctccagaggagagc
taa
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