Clarias gariepinus (North African catfish): 128516087
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Entry
128516087 CDS
T10780
Symbol
gabbr1b
Name
(RefSeq) gamma-aminobutyric acid type B receptor subunit 1
KO
K04615
gamma-aminobutyric acid type B receptor
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04080
Neuroactive ligand-receptor interaction
cgar04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
128516087 (gabbr1b)
04082 Neuroactive ligand signaling
128516087 (gabbr1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
cgar04030
]
128516087 (gabbr1b)
G protein-coupled receptors [BR:
cgar04030
]
Metabotropic glutamate receptor family
GABA
128516087 (gabbr1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ANF_receptor
7tm_3
Peripla_BP_6
Sushi
NEMP
UPF0242
DUF4407
ArlX
DUF6377
TMF_TATA_bd
SID-1_RNA_chan
Motif
Other DBs
NCBI-GeneID:
128516087
NCBI-ProteinID:
XP_053346355
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All DBs
Position
28:complement(9210688..9309026)
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AA seq
995 aa
AA seq
DB search
MTLLFFYTIIFMFDRFIEASHNNTAGCVIIRPPRDGGIRYRGLTQEQIRSVQVLPVDYEI
EYICRGNRVIVGPKVRKCLPDGTWTDLNQRSKCLLPCAQVWTSLENGRVMVLPPGPAVEG
TVLRYSCLSGFILEGRNTTQCTKLGTWDSPKPTCRYNRHHTGKKKLYIGALFPMSGGWPG
GQACLPSAQMALDLVNKRTDILPDYELELIYYDSRCDPGEATKLLYDLLYTEPIKIVLMP
GCSSVSTLVAEAARMWNLIVLSYGSSSPALSNRQRFPTFFRTHPSATLHNPTRVQLFQKW
KWTKIATIQQTTEVFTSTLDDLEQRVKEAGIEISVRQSFLTDPAVAVKNLKRQDARIIVG
LFYETEARKVFCEVYKEKLYGKKYVWFLIGWYADNWFKIKDPSINCTVEQMTEAVEGHVT
TEIVMLNPETVRGASNLTSQEFLTQLMSKLGGKNPEETGGFQEAPLAYDAVWALALALNK
TVGPLRARGRRLEDFNYNNKDITAEIYRALNTSSFEGVSGHVVFDAQGSRMAWTLIEQLQ
GGSYKKIGYYDMTKGNLSWYGNDKWIGPGPPADQTVVIRKFRFLSQKLFVSVSVFAGLGI
LLGIVCLTFNIYNSSVRYIQNSQPYLNNMTAVGCMMALAAVFPLGIDGLHVRRSQFPVVC
QFRLWLLGLGFSLAYGSMFTKIWWVHTVFTKKDEKKDKRKHLEPWKLYATVGVLLVIDVL
SLMIWQIVDPLHITEEKFTREAPKEDLDVLIEPLLEHCSSEKMNTWLGVVYGYKGLLLLL
GIFLAYETKSISTEKINDHRAVGMAIYNVSVLCMITAPVTMILSSKQDASFAFASLAIVF
SVYITLVVLFVPKMRRLITRGEWQSDQQETMKTGSSTNNNDEEKSRQLEQENKELQKIIQ
EKEERVSELRNQLSERQALRSRRHTSSTNLNHSTPPLPISHTDSKSLLPPPGYPLPTSDN
HSIPSTFSNSTSVYQPDGKISRNNCHPSRLQLLYK
NT seq
2988 nt
NT seq
+upstream
nt +downstream
nt
atgacgctattatttttttatacgataatattcatgttcgaccgcttcatcgaggcttcg
cacaacaacactgcaggctgtgtgatcatccgtccacccagagatggagggataagatac
agagggctaacccaggaacagatccgcagcgtgcaggtcttacccgtggactatgagatc
gaatacatctgccgagggaacagggtcatcgtggggccgaaggtcaggaaatgccttcct
gacggcacctggaccgatctgaaccagcgcagcaagtgcttgctgccatgcgcacaggtg
tggacgtctctggagaacggtcgtgtaatggtgcttcctcctggaccagcagtggagggc
accgtgctgagatacagctgcctgagcggcttcatcctcgagggcaggaacacgacgcag
tgcaccaaactgggcacatgggattcgcccaaacccacctgccgctacaacagacaccac
acaggaaagaagaagctctacatcggcgccttgttccccatgagcggaggatggcccggg
ggtcaagcgtgcctaccttcggctcagatggcgttggacctggtgaacaagcggaccgac
atcctgccggactacgagctcgagctgatctactacgatagcaggtgcgaccctggggaa
gccactaaactgctgtacgacctgctctacacggagcctataaaaatcgtcctgatgccc
ggctgtagctcggtgtccacgctggtagctgaggcggcgcgcatgtggaacctcatcgtg
ctctcgtacggctccagctctccggctctgtccaaccgccagcgcttccccaccttcttc
cgcacgcacccgtccgccacgctgcacaaccccacgcgcgtgcagctcttccagaagtgg
aagtggaccaagatcgccaccatccagcagaccactgaggtcttcacctccacgctggac
gatctggagcagagagtgaaggaagccggaatcgagatcagcgtgaggcagagtttcctc
accgaccctgctgtggctgtcaagaaccttaagcggcaggacgctcgcatcatcgtgggt
ctgttttatgagaccgaggcccggaaagtcttctgcgaggtctataaggagaagctgtac
gggaagaagtacgtctggttcctgatcggctggtacgccgacaactggttcaagataaaa
gacccgtcaatcaactgcactgtggagcagatgacggaggcggtggagggccacgttacc
acggagatagtcatgctcaacccagagacggttcgaggagcctccaatctgacctcgcag
gaattcctgacgcagctgatgtctaagctgggaggaaagaacccagaagaaactggagga
ttccaggaggcgccgctcgcctacgacgccgtgtgggccctcgctctggcgcttaataag
acggtcgggccattaagggccagagggcgcaggctggaggacttcaactacaacaacaag
gacattactgctgagatttatcgtgccctgaacaccagctcattcgaaggagtgtctggt
cacgtcgtgtttgacgcacagggctcgagaatggcctggactctcatcgagcagcttcaa
ggagggagctataagaagatcggatattacgatatgaccaaaggcaatctctcctggtac
gggaacgacaagtggataggccccggtcctccggcggatcagacggtggtgatccggaag
ttcagattcctgtctcagaagctcttcgtgtccgtctcggtgtttgccggactgggcatc
ttgctgggcatcgtgtgcctcacgttcaacatttacaacagcagcgtcaggtacattcag
aactcgcagccgtacctgaacaacatgacggctgtgggctgtatgatggctctggctgcc
gtgtttccgctgggcatcgacgggcttcacgtccgccgctctcaatttcctgtagtgtgc
cagttccgcttgtggctgctcgggctcggtttcagtctggcgtacggaagcatgtttaca
aagatctggtgggtgcacacagttttcaccaagaaggatgagaagaaagacaagcgaaag
catctggagccctggaagctctacgctacggttggtgtgctcctggttattgacgtcctg
tccctcatgatctggcagattgtggatccgctgcacatcacagaggagaagtttacgaga
gaggcgcctaaagaagacctggatgtgttgatcgagcctctgctggagcactgcagctct
gagaagatgaacacatggctgggggtggtttacggctacaagggcttgttgctgctcctt
ggcatcttcctcgcctacgaaaccaaatccatctctacagagaagataaatgaccaccga
gctgtggggatggccatctataacgtctctgttttatgcatgattacagctcctgtcacc
atgatcctgtcctcgaagcaggacgcttctttcgcctttgcctctctggccatcgtgttc
tccgtctacatcaccctggttgtgctgtttgtccctaagatgcgaaggttaatcacacgt
ggtgagtggcagtcggatcagcaggagaccatgaagacgggttcgtccactaataacaac
gacgaagagaaatctcgacagctggagcaagagaacaaagagctgcagaagatcatccaa
gagaaggaagagcgtgtgtccgaactgaggaaccagctctcagaacgacaagccttgcgc
tcccggagacatacgtcgtccaccaacctgaatcacagcacccctcctcttccgatctct
cacaccgactccaagtctctcctccccccgcccgggtaccctcttcccacctcggacaat
cactccatcccttcgaccttctctaactccaccagcgtttaccagccagacggcaagatc
agccgcaacaactgccatcccagccgcctccagctcctctacaagtga
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