Clarias gariepinus (North African catfish): 128519876
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Entry
128519876 CDS
T10780
Symbol
efna1b
Name
(RefSeq) ephrin-A1b isoform X1
KO
K05462
ephrin-A
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
128519876 (efna1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
cgar04052
]
128519876 (efna1b)
00536 Glycosaminoglycan binding proteins [BR:
cgar00536
]
128519876 (efna1b)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cgar00537
]
128519876 (efna1b)
Cytokines and neuropeptides [BR:
cgar04052
]
Cytokines
Growth factors (RTK binding)
128519876 (efna1b)
Glycosaminoglycan binding proteins [BR:
cgar00536
]
Heparan sulfate / Heparin
Axon guidance molecules
128519876 (efna1b)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
cgar00537
]
Others
128519876 (efna1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ephrin
Motif
Other DBs
NCBI-GeneID:
128519876
NCBI-ProteinID:
XP_053349782
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All DBs
Position
4:complement(9730646..9741496)
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AA seq
231 aa
AA seq
DB search
MDFLCLLLCALLCAWCVSSERHSVYWNSTNPNFIGDEYTVHVHINDYLDIICPHYKRGEI
PSQQAERYVLYMVDQEDYDVCKPHSFDQLRWECSRPFAAHAPEKFSEKFQRFTPFTLGKE
FRQGESYYYISKPLHQHGSDCLRLKVTVVGPHGSKNHKKTTEKEEEPEGGRQGRTGTGGA
HNPSNRLPAGEKHDPVAMIPVVQRSVGSSAVHIAPVSFIITLVPVFLLLLH
NT seq
696 nt
NT seq
+upstream
nt +downstream
nt
atggatttcctgtgcctgttgttgtgcgcgctgctgtgcgcctggtgcgtctcctccgag
cgccacagcgtttactggaacagcacgaaccccaacttcataggtgacgagtacacagta
cacgtgcacatcaacgactacctggacatcatctgcccgcactacaagcgtggcgagatc
ccttcccagcaggccgagcggtacgtcctctatatggtggaccaggaggactacgatgtg
tgcaagccgcactcgttcgatcagctgcgctgggagtgctccagacccttcgccgcccac
gcgcccgagaagttctctgaaaagttccaacgcttcacgcctttcacgctgggcaaggag
ttccgccaaggagagagctactactacatctccaagcctctccaccagcacgggagtgac
tgcctgcggttaaaggtcaccgtagtcggacctcatggttccaaaaaccacaagaaaacg
acagagaaagaggaggagccggagggaggaaggcaaggacgtacaggcacgggcggagcg
cacaacccatccaacaggcttccggcaggtgagaaacatgatcctgttgctatgattcca
gttgttcagaggagcgtaggcagctccgccgttcacatcgcgccagtctcctttatcatc
acacttgttcccgtcttcctcctgctcttacactga
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