Clarias gariepinus (North African catfish): 128528750
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Entry
128528750 CDS
T10780
Symbol
znf827
Name
(RefSeq) zinc finger protein 827 isoform X1
KO
K27104
zinc finger protein 827
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cgar03036
]
128528750 (znf827)
Chromosome and associated proteins [BR:
cgar03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
128528750 (znf827)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-H2C2_2
zf-H2C2_5
zf-C2H2_4
zf-C2H2_16
zf-Di19
zf-C2H2_6
zf-C2H2_jaz
GAGA
Motif
Other DBs
NCBI-GeneID:
128528750
NCBI-ProteinID:
XP_053357808
LinkDB
All DBs
Position
8:complement(2813168..2919953)
Genome browser
AA seq
1406 aa
AA seq
DB search
MPRRKQEQPKRLPSHAEPSEDGALAGSSAVEDGWFGNNSDSPSTSSYGDVQDDPRVSPGD
GARPDRAASARSPSGCATPNQRVSLELLGLDARTLSSQDMSLVSSVSLSSMVSSLYGDSA
HGLSKPLSSNLRRLLESGSVKIESGELIGRGLGRGTESPPAGLALSPSSHHAQQLSALAR
RLANSSNNGVSSASTSPASVPMVKQEPGDPFGPAEPASSGNTSFVWVGMGDKWPPTGSLS
PDSAIQKLKAAANAVLQDKNSTSLSSSSSSSSVTSSSSSSSSSSSVPPLGGRSDDPARFD
SFASPFSSQSASSTLAALSKKVSERSQQQQQPPPQQQQQQQQPSAAPFLSLVSMTSSAAL
LKEVAARAAGNMLADKKEPQLATANAEDSKAQLDRNHKAPTPNQNMELLLPTAPKGRTKP
SSQAGSPEDSGKPFQCPVCGLVIKRKSYWKRHMVIHTGLKSHQCPLCPFRCARKDNLKSH
MKVHQHQDRGETFQCELCPFTSSRHFSLKLHMRCHQHFPRTELKVKEESFTDAEEAEAER
ASGTGTSPSPSLCQAPGEPSSNHAHIKEEPQDVALTPPFPPGRERPGSSSSSLDLPRISA
SPPGPGPGTPAASLFSPDISTKTATDLLMKLSAANQKEALKSGFCVKEEPEAEEALSPTR
CPPFTLGHDAPAVPGRPRQDGSILSHDINVKVASELLMKLSENSKDTCLQKVTVKAEPME
VDPPSEVAPPPSHLLGFSTLGACEKKEPMASLPEPLPRPNKDLFSQDISVKMASELLFKL
SEKVSKANENKDSASFGMTSPFLDDRFRQSPFSTRSKSSSPAEASSSARASQQQDSEKLL
CETGNGLPQWRLNEQLFPCPVCGKVFGRQQTLSRHLSLHTEERKYKCHLCPYAAKCRANL
NQHLTIHSVKLVSTDAEHIVNSVTNEGGERKNCPYYYSCRVCGFQTELNAQFVSHMSLHV
DKEQWMFSLCCNSCEYVGVDEAEMKAHINAEHTGLNSRSPLSESKSTSSSLSALSDSLNS
SESGDVTQGSEELKSLLAPPSSASSQSSLASGMEEKSEKGFECVFCNFVCKTRAMYERHL
QIHLIARMFECDVCHKFMKTPEQLLEHKKCHTVPAGGFKCPLCIYSTSRAAAMECHLKTH
YKSEHRCRICQAAWASRAELERHARTHRLGNHYRCEQCGYLAKTANKLIEHGRVHTGERP
FHCDRCSYSCKRKDNLNLHKRLKHAPRHALGCARCPFTTTHPFVYSRHVRKHQAGEGSTQ
EEAQAAFTPRPLSADAIEPFFLPDGSSSSPLMSLSASQALQSVALSVSGMLPATTPSPHY
LCANGASPTSSPTLAAHYIEQYRTSDPAHLIPLTTLFSARRRFTFHAPSPFSRLWPRPSS
QTSPLHISPKHSFLAYLGLTERAKTV
NT seq
4221 nt
NT seq
+upstream
nt +downstream
nt
atgcccaggaggaaacaggagcagccgaagcgccttccttcgcatgcagagccatccgag
gacggggcgctagcgggcagctcggcggtggaggacggctggtttgggaacaattccgac
agcccttcaacatcatcctacggcgatgtgcaggacgacccgcgggtgtctccgggggac
ggggcacggccggaccgcgccgcctcggcccggagcccgtcgggctgtgctacgcctaat
cagcgagtgtcactggagcttctggggcttgacgcgcggaccttgtcctcgcaggacatg
tccctggtatcctctgtctcgctgtcatccatggtatcatcgctgtacggcgactcggcc
cacgggctctccaaaccgcttagcagcaacctgcgcagacttctggagtccggctcggta
aagatagaatcaggagagttgatcgggcgaggtctgggcagagggacggagtctccgcct
gcaggcctggcgctgtctccgtcctcacatcatgcccagcagttgagtgccctcgcacgc
agacttgccaacagcagtaacaacggcgttagctctgcctccacttcacccgcctcggtg
cccatggtaaaacaggagccaggagacccttttggaccagcggagcccgccagctcgggc
aacaccagcttcgtttgggtcggaatgggtgacaaatggcctccaactggaagcctgtct
cccgactcggccatccagaaactaaaagcagcagccaatgctgttctccaggacaagaac
tccacctctttatcctcctcctcgtcctcctcttcagtcacctcctcctcttcctcatcc
tcgtcttcttcctccgtgccgccactcggagggcgttcggacgacccggcgcgcttcgac
tccttcgcgtcgccctttagctcgcagtctgccagctccacgctcgccgcactctccaag
aaagtgtcagagcgaagccagcagcagcaacagccgccacctcagcagcagcagcagcag
cagcagccgtcggccgccccctttctgtctctcgtctccatgacctcatctgcagcgctg
cttaaagaagtggcagctcgggccgccggcaacatgctggctgataaaaaggagccgcag
ctggcgacggccaacgccgaggactccaaagcgcagttagacaggaaccacaaggcccca
acgcccaaccagaacatggagcttctgctgcccaccgcccccaagggacgcaccaagccc
agcagccaagcaggttcaccggaggacagtgggaaacccttccagtgccccgtgtgcggc
ctggtcatcaaacgcaagagctactggaagagacacatggtgatccacacgggtttaaaa
agccaccagtgtcctctgtgtcccttccgctgcgctcgcaaagacaatctcaagtcgcac
atgaaggtgcaccagcaccaggatcggggcgagaccttccagtgcgagctgtgtcccttc
acctcgtcgcggcacttcagcttgaagctgcacatgcgctgtcaccagcactttccccgg
accgagctcaaggtcaaggaggagtcgttcaccgacgcggaggaagccgaggcggagcgg
gcgtcgggcacgggcacctcgccgtctccgtctctgtgccaggccccgggcgaaccctcc
tccaatcacgcacacatcaaagaggagcctcaggacgtcgccctgacgccgcctttccca
ccaggcagagagcgaccgggtagcagcagcagctcactggatctgcccaggatcagcgct
agtccacccggcccgggcccgggcaccccggccgcatcgctcttcagccccgacatcagc
accaagacggccaccgaccttctcatgaagctctctgcggcgaaccagaaggaggcgcta
aagagtgggttctgcgtgaaggaggagcccgaggcggaggaagcactaagtccgacaaga
tgtccgccgttcaccctgggccacgatgcccccgcggtgcccggcaggccgcgccaagat
ggtagcatcctcagccatgacatcaacgtcaaagtggcgtccgaactgctcatgaaactc
tctgagaacagcaaagacacctgcctccagaaagtgacggtaaaggcggagccaatggag
gtggacccaccctcggaagtggctccgcccccttctcacctgctaggcttcagcacttta
ggggcatgcgagaagaaggagccgatggccagccttccggagcctctgccccgccccaac
aaagacctcttctcccaggacatatcggtcaaaatggcctccgagctgctcttcaaactg
tctgaaaaagtaagcaaagctaacgaaaacaaagacagcgcatctttcggcatgaccagc
ccttttctggacgaccgctttagacaatcgcccttcagcacgcgctccaagagctcctcc
ccggccgaggccagctcatccgcccgagcctcccaacagcaagattcagagaaactgttg
tgcgagacaggaaacggcctgccgcagtggagactcaacgagcagctcttcccatgtccg
gtgtgcggcaaagtcttcggccgccagcaaactctctccagacacctttccttacacaca
gaggagaggaagtataagtgtcacctgtgcccatatgcggcgaagtgccgcgccaacctg
aaccagcacctcaccattcactcggtcaaactggtaagcacggacgccgagcacatcgtt
aactcggtcaccaacgaaggaggggaacgcaaaaactgcccctactactacagctgtcga
gtgtgtggtttccagacggagctgaacgcacagtttgtgagccacatgtcgctgcacgtg
gataaggagcagtggatgttctcgctgtgctgtaactcctgtgagtacgtgggagtggac
gaggccgagatgaaggctcatatcaacgctgaacacacaggcctaaattccaggagtcct
ctgagtgagagcaagagcacgtcttcatccctctcagccctcagtgactccctgaacagc
tctgaaagcggagacgttacccaaggaagcgaggaactcaaaagtcttttggctccaccc
tcgtccgccagcagtcaatcgagtttggcatcaggaatggaggagaagtcagaaaaaggc
tttgaatgtgtgttctgcaactttgtgtgtaagacgcgggccatgtacgagcggcacctg
cagatccacctgatcgcacgcatgtttgagtgcgatgtctgccacaagttcatgaagaca
cccgagcagctcctcgagcacaagaagtgccatacggtccccgctggagggttcaagtgc
cctctgtgcatatactccaccagcagggcggcggccatggagtgccacctgaagacgcac
tacaagtcggagcaccgctgccgcatctgccaggcggcgtgggcgagccgtgccgagctg
gagcggcacgcgcgcacccaccgtctgggcaaccactaccgctgtgagcagtgtggctac
ctggccaagacggccaacaagctgatagagcacggacgcgtgcacacgggcgagcgcccc
ttccactgcgaccgatgcagctacagctgcaaacgcaaggacaaccttaacctgcacaag
cggctaaaacatgcaccacgccatgcgcttggctgcgcccgctgtcccttcaccaccacg
cacccgttcgtctacagtcgccacgtccgcaagcaccaggctggggagggcagtacccag
gaggaggctcaggctgcttttacgccacggccactcagcgccgatgctatcgagcccttt
ttcctgcctgacggtagcagtagcagcccgttaatgagcctgagtgcctcacaggccttg
cagtcggttgccttgtcagtttcaggtatgctgcctgccaccacgccctccccgcactac
ctctgtgccaatggagcttctcctacgtcatcgccaacactggcggctcactatatcgag
cagtacaggacctctgacccggctcatctcatacctctcaccacactcttcagcgctcgc
cgccgcttcacattccacgccccctcacctttctccagactctggccccgcccatcctca
cagacctcacccttgcacatatcccccaaacactccttcctggcgtatctgggattgacg
gaaagagcaaaaaccgtctga
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