Clarias gariepinus (North African catfish): 128529073
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Entry
128529073 CDS
T10780
Symbol
alms1
Name
(RefSeq) uncharacterized protein alms1
KO
K16741
alstrom syndrome protein 1
Organism
cgar Clarias gariepinus (North African catfish)
Brite
Chromosome and associated proteins [BR:
cgar03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
128529073 (alms1)
Cilium and associated proteins [BR:
cgar03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
128529073 (alms1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
128529073
NCBI-ProteinID:
XP_053358367
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Position
8:complement(21505407..21518590)
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AA seq
1691 aa
AA seq
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MPVIGRNDAPLDQPTLPTLLSTSDQQLKDQESRLSTGRVHSLPSLSYVQKVDAWNTNQRS
SRSFYNNLSLQGFNFVPQRKEQESVSVTVKQQSQQPPKNSFPVFNANNSTPTVQTGSGVP
SCADVEEGGFAVRSTSPSPFTHSHSHSSLGTVLIPAQQDKLQLNQNQLPLDVISPGINST
AAELSLSLSGTSDHRPVGDSGTGGAKTALRSEDQYSDMNLNTNRSNRVSCFPDRFHGEQS
FQASLGASSVVSLEVDNYAPYWTSRPGSPPHPPEFNIEDRIPIYLQNLGISQSPSKILNP
FTHHGPIREPEFSPTDLCTIKGSVETPTKSIQPFDADSLQKDTFSSSSVLSANSSASLTQ
LCVQTSIQQATRPASSGSSRMIGSLPEPHTPLHSVPQGANNSHREGSYGLPAEENNESAA
APVTWERVKEGESSLVGSGTLQEIRRLLGHAESLVSGHLSKTSSHGSHYYSENDASFLSL
RQDTKGYHDDSYLSVNGKISLVLARSSSDSALKESFSSSSGPLELSAKSDHINNGPSTPF
QAREENPKSRDFRVAPRRAEPEGCSAADPDRVGPMSLSITQGNASSKFDGQQQSQDNTVN
SVISSSEQSPSHSQAEAEAVVDASSEHSLASRVAKLLNSESSVSVVTSQSSTADPVENQA
REWIMMKVSGGKCETLELNAEDRRRIEEIKRELLLSTKHTKSSSDSESSTQSSVGTVPQP
AVGFAAMRSAEAHLSEQLQRVSRLPLDSSVPLHTPLDDRRSQFAIKEGGGKTQHTPTLQS
ASQCLHTHNSHASQNDLAIGSNSYSTLRSSEEWKPISQMTSKATKNKGGMGTVGKVKELR
DEDEHPETKENGLLPTTEAAHTIIQGKQEFTQSLESSSTIGQKPHLLNSHITPLVKSQPT
IQRPYTPASDSCTFPELQSGSNPHHLDNLRDVPLPVSSTSEVQQASVSSGTSLNKARNTD
QGQSTAMVHEHSQVTSRYPPAFTPPRRLDGPSRPLLANAAAVPTLLPYKPHGSSELFYMP
KTVPEVSPNHSDTTVESSHAGSDDAVPPQFTPEVLGSRELVDNNVTPKHKEGIYSKRTKM
KIESTLSGKGFHDQRGNTIPPYYPPAFRKSVVVPENEQMSEQIEVRESFIPLRMEADYST
TELHPNNRVQKHNMGTETQRMDQDMKGQDLGAEIVSSLDQLWRRFNERCSLPETQSSNDV
ELSLLERLERLSRLLHSSSPQQTPEEAHSSEEKGKSGRREQEPRRTQGKDTTRKRKEKKI
ENEVKGVPKTAWEQESLSINRALVEKKQQENDCCCPAERDGSATVSVNTSSSQSTIDTQR
LIRAFGPHRVSSGKDSVALNQTRHPNDGLMKLYSTIKKQKRGHNKGGSENHLVSVSTETS
NIDDSLASDTLSSSSPYNLPFKRGNGRTTNSKRAKVKLVSRSIQTGDLEIVVNGTRRNTR
DVGTTFPSPGSARTTKASSAACSEVKSQPALKRQALTKQTRYPSGLSWFVSADELKWDAR
KENKPQTDAGRSEGQAWYEPYTRTQPWREPLRERHIQVEREKHPEQKTHSENDCDSKPSA
LVRMSLQEALELHRPEFVSRSRERMKRMCLLTEERRMQAVFRKEREELFNRAAVMPQPKA
APAPPPLPSKRVIPISEMIQRSKRIYAQLPEVQKRKEEERRKAEYNSYRLNAQLFNKKIT
NRVLGRRVPWQ
NT seq
5076 nt
NT seq
+upstream
nt +downstream
nt
atgcctgttattggacgtaatgacgcaccccttgatcaacctaccctacctacgcttctg
tccacatctgaccaacaactcaaagatcaggagtctaggctgtctacaggaagagtacat
tcactacccagcctcagttatgtgcaaaaagttgatgcttggaacacaaaccagagatcc
agcaggtcattctacaacaatttgtctctgcaaggatttaattttgtacctcagagaaaa
gaacaggaatctgtgtctgtgacagtaaaacaacaaagtcaacaacctcccaaaaattca
tttccagtatttaatgccaataatagcactccaactgttcagacaggcagtggtgtacca
tcatgtgcagatgttgaagagggaggatttgctgtaagatccacctcaccgtcaccattt
actcactcccattctcattcgtcgcttggaacagtcctcatccccgcccagcaggataaa
ttgcagctaaaccaaaatcagcttccacttgatgtcatctctccaggcattaactctact
gcagctgaattgtcgctgtccttgagtggaacaagtgaccacaggccagttggtgactca
ggaactggtggtgcaaagactgctttgcgcagtgaggatcagtacagtgacatgaactta
aataccaataggagcaacagggtttcttgttttccagatagatttcatggtgagcagagt
tttcaggcgtctctaggtgcctcttctgttgtaagtcttgaagtggacaattatgcacct
tattggacttccagacctgggtccccgccacatccccctgagtttaacatagaagaccga
atcccaatctaccttcaaaatttgggaattagtcaatcaccttcaaaaatcttaaatccc
tttacacaccatggaccaattagagagcctgaattttcacctactgatttgtgcaccatt
aaaggctcagtagaaacacccaccaagagcatacaaccatttgatgctgatagtcttcag
aaggacacattctcaagttccagtgtgctttctgctaattccagtgcctctttaacacag
ctatgtgttcagacgtccattcagcaggcaaccagaccagccagttcaggcagttcaaga
atgattggcagtcttcctgagcctcacactccattacacagtgttcctcaaggagctaat
aattctcatcgagagggcagttatggcctgccagctgaggagaacaatgagtctgcagct
gctcctgtgacctgggagcgtgttaaagaaggggaatcatctctagtgggatctggaaca
ctgcaggagatcaggcgtttgcttggtcatgcagaaagccttgtttctggtcacttgtca
aagacctcttcccatggctcacactattattcagagaatgacgcctcctttttgtcccta
aggcaggacacaaaaggatatcatgatgactcgtatttgtcagttaatggaaaaatttct
ttggtacttgctcgctcttcctcagactctgccctgaaggagagcttctcttcttcgtct
ggacctctagagctctctgcaaaatctgatcacataaacaatgggccctcaacacccttt
caggccagggaggaaaatccaaagtcacgtgacttccgtgtggctccaaggagagcagag
cctgagggatgcagtgcagcagacccagatagggtaggccctatgagcctatcaattaca
caggggaatgcttcctcaaaatttgatggccagcagcaaagccaggacaatacagtaaat
tctgtcatcagttcatctgagcaaagtcccagccacagtcaagcagaggcagaagctgtt
gttgatgccagcagtgagcattcactggcttctagggttgctaagcttctgaacagcgag
tcgtctgtctctgtggttaccagccagtcaagtactgctgatcctgttgagaaccaagct
agagagtggatcatgatgaaggtctctggtggaaaatgtgaaactttagaactgaatgca
gaagacaggagaagaatagaggagataaaaagagaactactgctatccactaaacacacc
aagtcgagctcagattcagaaagcagtacgcagtctagtgttggcactgtcccccagcct
gctgtagggtttgcagctatgcgcagtgcagaagcgcatctctctgagcagctgcagaga
gtcagtcggcttccactcgactccagtgttccactgcacacacccctggatgacagaaga
agtcagtttgccatcaaagaagggggtggtaaaactcaacacacacctactcttcagtca
gcaagccaatgtcttcatacacacaacagccatgcttcccagaatgaccttgcaatcgga
agcaactcgtattcaaccctgaggtcatctgaggagtggaaaccaatatctcaaatgaca
agtaaagcaacaaagaataaagggggcatggggacagttggaaaggtaaaagaattgaga
gacgaagatgaacatccagaaactaaggaaaatggcctgttaccaactactgaagcagct
cacactatcatccaaggaaaacaagagttcacccaaagcttggagtcaagttcaaccatt
ggtcaaaaacctcacttgttaaatagccatatcacacctttagtgaaatcgcaacccacc
atccagagaccttacacacctgccagtgattcctgcacttttcctgagctgcaaagtgga
tcaaacccacatcatttagacaatctgagagacgtcccactcccagtctccagcaccagt
gaagtacagcaagcttcagtgtccagtgggacaagcttaaataaagcaagaaatacagac
cagggtcagagcacagcaatggttcatgaacattcacaggtgacctcaagatacccacca
gcttttactcctcctagaagacttgatggtccaagtagacctttattagctaatgcagct
gctgttccaacgttattgccatataaacctcacggcagttcagagctcttctacatgcca
aagactgtccctgaggtctcccctaatcactctgataccacagtggagagctcccatgca
ggatctgatgacgctgtgccccctcaatttaccccagaggttttgggatctagagagctt
gtggataacaacgtaacaccaaaacataaggagggcatttacagcaagaggaccaaaatg
aaaatagaatccactttgtctggaaaaggctttcatgaccaaagaggcaatactattcct
ccctattaccctcctgcttttaggaaatctgttgttgtccctgagaatgaacaaatgtct
gagcaaattgaagtgagagaatcatttatccctctgcgcatggaggctgactacagcact
actgaactacatcctaacaacagggtacaaaagcataatatgggtacagaaactcagagg
atggatcaggacatgaagggacaagatcttggtgcagagattgtcagctctctggatcag
ttgtggcgtcgcttcaatgagcgatgcagccttccggagactcaatcctctaatgacgta
gaactgtcactgctggagagactggaacgcctgtcccgccttttacacagctcctcgcca
caacagacacctgaagaggcacacagtagtgaggagaagggcaagagtgggaggagggaa
caggagccaaggagaacacaaggaaaagacacaaccagaaagagaaaagagaaaaagatt
gaaaatgaagtgaaaggtgttccaaaaactgcatgggaacaggagtccttaagtatcaac
cgggctttagtggagaagaagcagcaagaaaatgactgttgttgtcccgcagagagggac
gggtctgctactgtttctgtgaacacaagcagcagccagtctactatcgacacacagcgg
ttgatcagagcttttggaccgcatcgagttagcagtgggaaagacagtgtagctctaaat
cagactcgacatcccaatgatggcttgatgaaactttatagcactattaaaaagcagaag
agaggacataataaaggtggctctgaaaatcaccttgtttctgtttccacagaaacaagc
aacattgatgactccttggcctcagacactttatcgtcctcaagtccttataacctaccc
ttcaaaagaggcaatggacgtacaactaattctaaaagggcaaaggtcaaacttgtcagc
agaagcatacaaacaggtgatttggagattgtggtcaatggcactcgccgaaacacgcgg
gatgttggcactacctttccttctccaggtagtgccagaaccactaaggcatcttcagca
gcctgcagtgaggtgaaatctcaaccagcgctaaagagacaggcactcactaaacaaacc
cgctatccaagtggtttgtcatggtttgtttctgctgatgaactgaaatgggatgcgcgt
aaggagaataagccgcaaacagatgcagggcggtctgaaggccaggcctggtatgagccc
tacaccaggacgcagccatggagagagccgctcagagaacgacacattcaagtggaaaga
gagaagcaccctgagcaaaaaacacattcagagaatgactgtgacagcaaaccctctgca
ctggtccgcatgtctctgcaggaggcgctagagttgcatcgaccagagtttgtctctcgt
tctcgggagcggatgaaaaggatgtgcctgttgacggaggaaagaaggatgcaagctgtc
tttaggaaagaaagagaggagctttttaatcgtgctgcagtcatgccccagccaaaagca
gcgccagctcctccacctcttccctccaagcgtgttattcccataagtgaaatgattcag
aggtccaagcgaatttatgctcaactcccagaggttcagaaaaggaaagaggaagaacgg
aggaaagctgagtacaactcttaccgcctaaatgctcagctatttaacaagaaaattacc
aaccgtgtgctgggaagaagagtgccttggcagtag
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integrated database retrieval system
