KEGG   Clarias gariepinus (North African catfish): 128531573
Entry
128531573         CDS       T10780                                 
Symbol
rapgef2b
Name
(RefSeq) rap guanine nucleotide exchange factor 2 isoform X1
  KO
K08018  Rap guanine nucleotide exchange factor 2
Organism
cgar  Clarias gariepinus (North African catfish)
Pathway
cgar04010  MAPK signaling pathway
cgar04517  IgSF CAM signaling
cgar04530  Tight junction
Brite
KEGG Orthology (KO) [BR:cgar00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    128531573 (rapgef2b)
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    128531573 (rapgef2b)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    128531573 (rapgef2b)
SSDB
Motif
Pfam: RasGEF PDZ RasGEF_N RA cNMP_binding PDZ_6 RA_2 PDZ_2
Other DBs
NCBI-GeneID: 128531573
NCBI-ProteinID: XP_053361491
LinkDB
Position
10:5967691..6088454
AA seq 1605 aa
MASYVDNSFRQAVMLNPAERTQQDLEIVYSYLHGMEALSNLREHQLRMMCETVRYERHEA
NEVLYYPDDIGSCWYILLSGSVFIKESMFLPRSSFGKRSAGSLRRGCECIVLEPSEMIVV
DYMDENEEYFQRQASHRQSRRRFRKINQKGERQTIIDTVEPYQAGKPPITRGYHTECVKA
QLPADFSRLHLADGIHPQVTHVSSSLSGCSITSDSGSSSLSDIYQATESEPGDMDLSGLP
ETAVDSEEDDDEEDIERASDPLMSRDIVRDCLEKDPMDRTDDDIEQLLEFMHQLPAFANM
TMSVRRELCAVMVFAVVERAGTIVLNDGEELDSWSVILNGSVEVTYPEGRTEILCMGNSF
GVSPTMEKEFMKGVMKTKVDDCQFVCIAQQDYCCILNQVEKNMQKVEEEGEIVMVKEHRE
LDRTGTRKGHIVIKGTTERLTMHLVEEHSVVDPTYIEDFLLTYRTFLSSPMVVGRKLLEW
FHDPSLRDKVTRVVLLWVNNHFNDFEGDPEMTHFLEEFENNLEREKMFGHLRLLNIACAA
KAKLRVVTLTKPSREAPLAFSLLGGSEKGFRIFIENVEPGSKAAEAGLKRGDQILEMNGQ
NFENVQLSKANEILRNNTHLSITVKTNLLVFKELLARPEHDQEPDHDEELDRKNGAPHIP
KIGDIKKASRYSIPDLAVDVEQVMGLEKASKKAKANTVGGKNKLKKIFDKTLTSILPPKP
YNDVAVGQSQDDSIVGMKQSKQIPPALPVSGNLSSSNPDLLQSHHRILDFNNQPEPVPNN
MSDQVLRVFKADQQSRYIMIGKDTTAKEVVAQAIREFALTAAPEAYSLCEVSVTPEGVIK
QRRLPEQLSKLADRIQLSGRYYLKSNMETETLCSDEDAQELLRESQISLLQLSTVEVATQ
LSMRAFELFCAIEPTEYIVDLFKLRSRLPGPSSLKLFEESINRETFWVATEVLREPNQLK
RMKIIKHFIKIALHCRECKNFNSMFAIISGLNLAPVSRLRGTWEKLPSKYEKLFSDLQDL
FDPSRNMAKYRNVLNSQNLQPPIIPLFPVIKKDLTFLHEGNDSKVDGLVNFEKLRMIAKE
IRHVGRMAAINMDPALMFRTRKKKWRSLGSLSQGSANAAVLDVTQTGGHKKRVRRSSFLN
AKKLYEDAQMARKVKQYLSNLTLETNEESLQTLSIQCEPSISTLPKSSGDRKRPDTSPVV
ARAALHPRQQLQKSSQGLQVPTVALYPSRKKVPVKDLPPFGTNSPQSLKKILSLSEEAAE
RHRKQTEDAMSSTSSPPTSPRSSPKKGLTRASDNLSDSGHSEISSRSSLVSTSSLDMGQD
ERRLRYAHGVIDGHTGGHGGHRLERRATADPDQYSLGSYSSVQDWRGMYVSTAMPSSPSS
EELSQEQGDRVSLDAADSGRGSWTSCSSGSHDSIQAMQQGRSWEALAEGAGLWAGRGSWA
STSSCSSSSAACWGDESEGDTGTIKRRGGKDVGTDPDTCSITSTGSEESKQQSRRPSPIT
AGTTKTNLPRKDGRYRDPPPTPPGYTALSISEVTEGTTHTTRRPPDYTTALQRSRLVTHS
PKPGTERAGEDDEEEEEVEEEGECFSPKLRGQRRRGPHTAVPPRP
NT seq 4818 nt   +upstreamnt  +downstreamnt
atggcgtcctacgtggacaacagcttccggcaggcggtgatgctgaacccggccgagagg
acgcaacaggatttggagattgtatattcctatttgcacggtatggaggcgctgtccaat
ctcagagaacatcagctaaggatgatgtgtgaaaccgtgcgctatgaaagacatgaagca
aatgaagtgctttactatccggatgacatcggcagctgctggtacatcctgctctctggg
tctgtgttcatcaaagagtccatgttccttcccagatccagtttcgggaagcgttccgcc
gggagtttacgtcgcggatgtgagtgcatcgttctggagccgtccgaaatgatcgtggtg
gactatatggatgagaatgaggagtatttccagcgtcaggcttcgcatcgtcagtcccgt
aggagattccgtaaaatcaaccagaagggtgaaaggcagacgatcatcgacacagtggaa
ccgtaccaagcgggcaagccgcccataacccgcgggtaccacacggaatgcgttaaagct
cagctcccagcggacttcagcaggctccacctggctgacgggatccaccctcaggtgacc
cacgtctcctccagcctctcaggatgtagcatcaccagtgactccgggagcagcagcctg
tccgacatctaccaggccacggagagcgagccaggcgacatggacctgagtggcctcccc
gagaccgccgtcgactccgaagaggatgacgacgaggaagacatcgaacgcgcctctgat
ccgctcatgagccgagacatcgtccgtgactgcctggagaaagaccccatggaccggacc
gacgatgacatcgagcaactgctggagttcatgcaccagctgccagcctttgccaacatg
accatgtcggtgaggagggagctgtgcgccgtcatggtgttcgccgtcgtggagcgagct
ggaaccatcgtccttaacgacggcgaggagctggactcgtggtcggtgatcctgaacggc
tcggtggaagtgacgtaccccgagggccgcaccgagatcctctgcatgggcaacagcttc
ggcgtctcgcccaccatggagaaggagttcatgaagggagtgatgaaaaccaaggtggac
gactgtcagttcgtgtgtatagcgcagcaggactactgctgcatcctgaaccaggtggag
aagaacatgcagaaggtggaggaggagggcgaaatcgtcatggtgaaagaacaccgcgag
ctcgatcgcaccggcaccagaaaaggacacatcgtcatcaagggcacgacggagcgtctg
accatgcacctggtggaggagcactcggtggtggaccccacctatattgaagacttcctg
ctcacctaccgcaccttcctgtccagccccatggtggtgggcaggaaactgctggagtgg
ttccatgaccccagcctcagggacaaggttacacgggtagtcttgctgtgggtgaacaat
cacttcaatgacttcgagggcgaccctgaaatgacgcactttctcgaagagtttgagaac
aatctggaaagggagaaaatgtttgggcacttaagactgttaaacatagcctgcgctgcc
aaagccaagctgagggtggtgaccctgactaagccgtcacgcgaggctcctctggccttc
agcctgctcggcggttcggagaaaggcttccgcatcttcattgagaacgtggagccgggc
agcaaagctgcagaagcaggcctcaaacgtggagatcagatcctcgagatgaatggacag
aactttgagaatgtacagctgtccaaagcgaatgagatcctgcgcaacaatacacatctg
tctattactgtgaaaactaatctcctagtgtttaaggagcttctggctcggccggagcat
gaccaagaacctgaccatgacgaagagctggacaggaagaacggcgctcctcacattccc
aagatcggggatatcaagaaggcaagccgttactccatcccagacctggccgtggacgtg
gagcaggtgatgggtctggagaaagcaagcaagaaagccaaggccaacacggtgggaggg
aagaacaagctcaagaagatcttcgacaagactttgaccagtattcttccgcccaagccg
tacaacgatgtcgctgtaggccagtctcaggacgacagcattgtcggaatgaagcagtcg
aaacagatccctcctgctctcccggttagcggaaacctatcgtccagcaacccggacttg
ctacagtctcatcatcgcatactcgacttcaacaaccagccagaacccgtccctaacaac
atgtcggaccaggtgctgcgggtcttcaaggctgatcagcagagtcgttacatcatgatc
ggcaaggacaccacggccaaagaggtcgtcgctcaggctatcagggagttcgctctgacc
gccgcccctgaagcgtattcgctgtgcgaggtgtccgtcactcccgagggtgtaatcaag
caacggcggcttcctgagcagctctccaaactggctgatagaatccagctcagcggcagg
tactacctgaagagcaatatggagacggagacgttgtgctcggacgaggacgcccaggag
cttctgagggagagtcagatcagcctcctgcagctaagcacggtggaagtggcgactcag
ctctccatgcgtgccttcgagcttttctgcgccatcgagcccaccgagtacatcgtcgac
ctcttcaagttgcggtcgcgcttgcccggaccttccagcctcaagctcttcgaagagtcc
ataaaccgggagaccttctgggtggccaccgaggtgctgcgagaacccaaccagctgaag
cgcatgaagatcatcaagcatttcatcaagatcgccttgcactgtcgcgagtgcaagaac
ttcaactccatgtttgccatcatcagcggtctaaatctggcgcccgtctccagactgcga
ggaacctgggagaaacttcccagcaagtacgagaagctcttcagcgacctgcaggacctg
tttgacccgtccaggaacatggccaaataccgcaacgttctcaacagccagaaccttcag
ccgccaatcatccctctcttcccagttatcaaaaaagacctcaccttcctccatgagggg
aacgattcgaaggtggacggcctggtgaacttcgagaagctgcgtatgattgctaaggag
atcagacacgtgggtcggatggcggccatcaacatggacccggcgctgatgttccgcacc
aggaagaagaagtggaggagtttaggctcactgagccaaggcagtgccaatgcagccgta
ctggatgtaacccagacgggcgggcacaaaaagcgcgtaaggcggagttctttcctcaat
gccaagaagctgtacgaggacgcccagatggcacgtaaggtcaagcagtacctgtctaac
ctcacactggagaccaacgaggagagcctgcagacgctgtctatacagtgtgaaccctcc
ataagtacattgcctaagagctcaggggacaggaagaggccagacacctcgccagtggta
gcacgagccgccctgcatccacgccagcagctccagaaatccagccagggtctgcaggtg
ccaactgttgccctctacccatcccgcaagaaggtccctgtcaaagacctgccaccgttt
ggcacgaattccccacagtccctgaagaagattctgtctctgtcagaggaagcagctgag
agacacagaaagcagacggaagatgccatgtctagtacctcgtctcccccgacgtctcct
cgcagctccccgaagaaaggtttaacaagagcgagtgataacctgtcagactcgggccac
agtgagatttcttcccgctcaagtctggtcagtacgtcctccctggacatgggccaggac
gagcggcgtctccgatacgctcacggggtcatcgacggccacaccggtggtcatggaggt
caccggctcgagcgcagggccacggctgacccagaccaatacagtctcggctcgtactca
tcagtgcaggactggcgtggtatgtacgtcagcacggccatgccgtcctcgccgagttca
gaggagttaagtcaggagcagggcgaccgcgtgtccctggatgcagcagactctggacga
ggcagctggacgtcctgctcaagcggttcacacgacagtatccaggccatgcagcagggc
aggagctgggaggcgctggctgaaggggcggggctctgggccggacgaggaagctgggcg
tcgacctcgtcgtgctcgtcctcgtcggcggcgtgctggggagacgagtccgaaggtgac
accgggactatcaagcggagaggcggtaaagacgtgggaaccgaccccgacacctgcagc
atcacgtctacaggttcagaggagtcgaagcagcagagccgccggccgtctcccatcacc
gccggcacgaccaagaccaacctgccgcgtaaagacggtcgataccgcgacccccctccc
actcctccaggctacacggccctgtccatctctgaggtgacggaagggacaacgcacacg
accaggaggcctccagactacaccacggcgctacagcgctcccgcctcgttacacactcg
cccaaaccggggaccgagcgtgcgggagaggatgacgaagaggaggaagaggtagaggag
gagggtgagtgcttttctcccaaactcagaggtcagaggaggagaggtccacatacagca
gtgccccccaggccatga

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