Clarias gariepinus (North African catfish): 128532937
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Entry
128532937 CDS
T10780
Symbol
vps53
Name
(RefSeq) vacuolar protein sorting-associated protein 53 homolog
KO
K20299
vacuolar protein sorting-associated protein 53
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgar04131
]
128532937 (vps53)
Membrane trafficking [BR:
cgar04131
]
Protein recycling
Others
EARP complex
128532937 (vps53)
Endosome - Golgi transport
Tethering complex
GARP complex
128532937 (vps53)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps53_N
VPS53_C
Vps54_N
COG4_N
NBD94
Syndetin_C
FBF1
GrpE
hAT-like_RNase-H
Laminin_II
COG5_N
O_Spanin_T7
COG3_N
VPS51_Exo84_N
ING
Sec8_N
Motif
Other DBs
NCBI-GeneID:
128532937
NCBI-ProteinID:
XP_053363061
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All DBs
Position
11:19085807..19139644
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AA seq
831 aa
AA seq
DB search
MMEDEELELVEDLDAILLLTPEVQLAIEQVFPSQDPLDRADFNAVEYINTLFPTEQSLAN
IDEVVNKIRLKIRRLDDNIRTVVRGQTNVGQDGRQALEEAQIAIQQLFGKIKDIKDKAEK
SEQMVKEITRDIKQLDHAKRNLTTSITTLNHLHMLAGGVDSLEAMTRKRQYGEVANLLQG
VVNVLEHFQKYMGIPQIRQLSERVKAAQSELGTQILADFDEAFPAQGSKRPGGPSIVLRD
ACLVASVLDPRIKQEIIKKFIRQHLSEYLVLFQENQDVAWLDKIDRRYAWIKRQLVDYEE
KYGRMFPEEWCMTERIAVEFCHITRTELAKLMRARAREIEVKLLLFAIQRTTNFEGLLAK
RFSGSTLSDSPGKRPETPLEPTNPFLEDESGEDNVSEKDDDLVKPKKPKTPENPFHGIVS
KCFEPHLYVYIESQDKNLGELIDRFVADFRAQGPPKSGTEEGGAVLPSCADLFVYYKKCM
VQCSQLSTGEPMIALTTIFQKYLREYAWKILSGNLPKTSSNSGGLTISSLLKEKEGSEVA
KFTTEELCLICSILSTAEYCLATTQQLEEKLKEKVDKSLMERINLTGEMDTFSTVISNSI
QLLVQDLDAACDPALTAMSKMPWQSVEHVGDQSPYVTSVIMHIKQNVPIIRDNLAATRKY
FTQFCIKFINSFIPKFINHLFRCKPISMVGAEQLLLDTHSLKTVLLDLPSIGSQVLRKAP
ASYTKIVVKGMTRAEMILKVVMAPHEPSVIFVDNYIKLLADGNPETFQKILDMKGLKRSE
QSSMLELFRQRLPTPPSGPETGPTMSFSAPTPEQESSRIRKLEKLIKKRIQ
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atgatggaagatgaagaattagagcttgtggaggatttggacgcgatattactccttacc
cctgaagtgcagctggcaatcgaacaggtgtttcccagccaggacccactcgatcgagcg
gatttcaatgcagttgaatacatcaatactttgttccccactgagcagtcactagcgaat
atcgatgaagtggtgaacaagattcgactgaaaatcaggcggctagatgacaacatcagg
acagtggtgaggggacaaactaacgtaggacaggatggcaggcaggctctggaggaagct
cagatagccatccagcaactgtttggcaaaatcaaagacatcaaggataaagcggagaaa
tctgagcaaatggtaaaagagatcacccgggacatcaagcagctggaccatgcaaagcgt
aacctaaccacatccattactacccttaatcacctgcacatgctagcaggcggagtggac
tctctggaggcaatgacacgcaagaggcagtatggggaggtggccaacttgctccagggg
gtggtcaacgtactggagcactttcaaaaatatatgggcatccctcagattcgacagttg
tctgaaagagtgaaagcagcacaaagtgaactaggcacacagatcctagctgattttgat
gaggcttttcctgcacagggctcaaagaggcctggaggccccagcattgtgctaagggat
gcctgtttggtggccagtgttctggatcctcgcattaagcaggaaataatcaagaagttt
attaggcagcatctctctgagtatcttgtgctctttcaagagaaccaggatgtggcatgg
ttggacaagattgaccggcgctatgcatggataaagcgtcagctagtggactatgaggag
aagtacggccgcatgtttcccgaagagtggtgcatgaccgagcggattgctgtggaattc
tgccacatcaccaggactgagttggccaagctgatgagagctcgtgccagggaaattgag
gtcaagctcttgctctttgctattcagaggaccaccaatttcgaggggctgctggctaag
cgcttctcaggcagcaccttgagcgacagcccagggaagagacctgaaactcccttggag
cccactaacccttttctggaggatgagtcaggagaggacaatgtttctgagaaagacgat
gatctggtcaagccaaagaagcctaagaccccagagaaccctttccatggcattgtttcc
aaatgctttgagcctcatctctatgtctacatagaatcacaggacaagaaccttggggag
ctgattgaccgctttgtggcagattttcgagcccagggtccccctaagtcaggcacagaa
gaagggggagctgtgttgcccagttgtgcagatctttttgtatactataaaaagtgcatg
gtgcagtgctctcagctgagcacaggagaacccatgattgccctcactaccatcttccaa
aagtacctgcgagagtatgcctggaagatcctgtctgggaacctgcccaaaacaagtagt
aacagtggaggtctgaccattagcagtctgttaaaggagaaagaggggtcagaggtggcc
aaatttaccacagaagaactttgcctaatttgcagtatcctaagcacagctgaatactgc
cttgctaccacacagcagctagaggagaagctaaaggagaaagtagacaagtcgctcatg
gagaggatcaatctaacaggggagatggacacctttagcactgtgatctccaacagcatc
cagcttttggttcaggacctggatgctgcatgtgacccagcccttacagctatgagcaag
atgccatggcaaagtgttgagcatgttggtgaccaaagcccctacgtcacgtctgtcatc
atgcatatcaaacagaatgtaccaattattagagacaacctggctgccactcgcaaatac
ttcacccagttctgcatcaagtttattaactcatttattccaaagttcataaaccacctg
ttccggtgtaaacccatcagcatggttggagctgagcagcttttattggacacacactct
ctgaagacagttttgttagatctcccatccattggctctcaagtccttcgcaaagctcca
gcgagttacacaaaaatagtggtcaaagggatgactcgggcagagatgatactaaaggtg
gttatggctcctcatgagccatcggtgatctttgtggataattatatcaagcttcttgct
gatgggaacccagagactttccagaaaattctagacatgaagggactgaagcgcagtgag
cagagcagtatgctggagctctttagacagaggttgcccactcctccttcagggccagag
acggggcctaccatgtctttcagtgccccaacccctgagcaggagtcctcccgcatccgt
aaattggagaagctaatcaaaaagcgaattcagtga
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