Clarias gariepinus (North African catfish): 128535631
Help
Entry
128535631 CDS
T10780
Symbol
sec24d
Name
(RefSeq) protein transport protein Sec24D
KO
K14007
protein transport protein SEC24
Organism
cgar Clarias gariepinus (North African catfish)
Pathway
cgar04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
128535631 (sec24d)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgar04131
]
128535631 (sec24d)
Membrane trafficking [BR:
cgar04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
128535631 (sec24d)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
GDP_Man_Dehyd
Motif
Other DBs
NCBI-GeneID:
128535631
NCBI-ProteinID:
XP_053365677
LinkDB
All DBs
Position
1:33035844..33057579
Genome browser
AA seq
1031 aa
AA seq
DB search
MSQQGYVATPPYSQAQAGMGGYPAQSHYGHYGSPQQPFPPQPAGMLKPAASSPSGMPPPP
VSNQYGSPVHQNGAHPQKFPPLPAVSAPAMSPYGQPPQRPYHSIAPATPPTQQITNQMSA
MNIDGYAQSPMQNPQSLAAPQPFQMSPPPTVGHPSMSPSGTQHLSMGTCPPMAAGPPVQA
TGPPPMGLSNLQPHPPPMSGAGFQKPPAPQGFPPQQPGTGLYGGQMPGSPMAGPQPGAYP
GGFPGGAANMAGPPQKKLDPDSIPSTIQVIESDQVKRGSQVYTTNLRGQVPPLVTTNFTV
QDQGNASPRFMRCTTYSFPCTADLAKQWQVPLASIIKPFATVPKNETPLYIVNHGETGPI
RCNRCKAYMCPFMLFIEGGRRFQCGFCNCVNEVPVQYFQHLDHMGRRLDIYERPELSLGS
YEFVATLDYCKNNKPPNPPAYIFMIDVSYNNIKSGLVKLICEELKTLLDRLPKEEGAESS
AIKVGFVTYNKILHFFNVKSALAQPQMMVVSDVADMFLPLLDGFLVSFQESQAVINNLLS
QIPDMFADTNESESVFAPVIQAGVEALKAAECSGKLFIFHSSLPTAEAPGKLKNRDDRKL
VNTDKEKTLFQPQRGVYEQLTKECVSQGCCVDLFLFPNQFVDLATMGDIPTHTGGSVYKY
SNFQVQTDAQHFLSDLRRDVEKSIGFDAIMRVRTNTGFRATDFFGAIYMNTTTDVEMAAV
DCDKAVTVEFKHDDTLSEEAGALIQCAVLYTSVGGQRRLRVHNLSLNCSSQLSELYKSCE
TDALINFFAKSAYHAILSQPVRTVREILVRQTAHMLACYRKNCATPSAASQLILPDAMKV
LPVYMNSLMKTPVLVGSAELSTDDRAFHRLSVMSMGVEESQALLYPQLIPVHSMDLASDS
IPAAVRCSEERLAETGVFLLENGQSMFLWLGHACSPDIIQNLFNVPSMAHLSSDTTVLPE
LDNAHSRKLYSIILAISKQRCKSMKMVIVKQKDRSEMLFRQLLVEDKGLYGGASYLEFLC
SVHREIRQLLS
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atgagccagcaaggttatgtcgctacgcctccgtactcccaggcccaggcaggaatgggg
ggataccctgcacaatcccattatgggcactatggatctccacaacagccatttcctcca
cagccagcaggtatgcttaaaccagctgcctcctccccctctgggatgcctccaccacct
gtgtctaaccaatatggatctcctgttcaccaaaatggagcacatccacaaaagttccct
ccgcttccagcagtctccgcacctgccatgtctccctatggacagccccctcaaagacca
taccacagcatagctccagccacaccaccaacccaacagataaccaatcagatgagtgct
atgaacattgacggatatgcccaaagccccatgcaaaatcctcagtctttagcagcacca
cagcctttccaaatgtctccacctcctacagtgggacatccatccatgtctccttcaggc
actcaacatctttcaatgggtacatgtccaccaatggcagctggtccaccagtgcaggca
acaggccctccaccaatggggttgtctaatttacagcctcaccctcctccgatgagtggg
gctggattccaaaagccaccagcacctcagggatttcctcctcagcagccaggtacaggt
ttatatggaggacagatgccaggatcaccaatggcagggccacagccaggcgcttatcca
ggaggcttcccaggaggagctgccaacatggctggacctccacagaagaaacttgatcca
gactccatacctagcacaatacaagtgattgaaagtgaccaggttaagagaggtagtcag
gtctacaccacaaacctcaggggtcaagtgccacccctggtcacaaccaatttcactgtt
caagatcaaggaaatgctagtccgcggttcatgcgatgcacaacctactcatttccctgt
actgctgatcttgccaagcagtggcaagtgcccttggcatccatcatcaaaccttttgct
acagtgcccaaaaatgaaactcctctatacatagtaaatcatggcgagacaggacccata
cgctgtaaccgctgtaaggcatacatgtgccccttcatgcttttcatcgagggtggtaga
cgcttccaatgtggtttctgcaactgtgttaatgaggttcctgtccagtatttccagcac
ctggaccatatgggccgaagattggatatatatgaacgaccagagctgtccctgggttct
tacgagtttgtcgctactctggattactgcaaaaacaataagcctcccaatcctcctgct
tatatcttcatgatcgatgtttcctacaacaacataaaaagtggactagttaagctgata
tgtgaggaactgaagacactgcttgatcgactacccaaagaggagggagctgagagttca
gccatcaaagtaggcttcgtcacctacaacaagatcctgcacttcttcaatgtgaagagt
gcactagctcagccccagatgatggtcgtctctgatgttgcagatatgtttttgcccctt
ctggatggattcttggtgagctttcaggagtcacaagctgtcatcaacaatctcttgagc
cagatccccgacatgtttgctgacacaaatgagagtgaatctgtttttgctccagttatt
caagcaggagtggaagcactgaaggctgctgaatgcagtgggaagctcttcatcttccac
tcatccctcccaactgcagaggcacctgggaagctgaaaaaccgagacgacaggaagctg
gtgaacacagacaaagaaaagactctttttcagccacagcgtggtgtgtatgagcagctt
actaaggagtgtgtgagccagggatgctgtgtggaccttttcctgtttccgaaccagttt
gtggacttggccactatgggtgacattcccacacacactggtggctcagtttacaaatat
agcaacttccaggttcagacagacgcacagcatttcctcagtgatctaagacgagatgtg
gagaagtctattggatttgatgccattatgcgtgttcgaaccaacacaggtttcagggcc
acagacttctttggtgcaatttatatgaacacaactacagatgtggagatggctgcagtg
gactgtgacaaagcagttacagtggagtttaagcatgatgacacccttagtgaggaggct
ggggcacttatacagtgtgctgtgctgtatacctcagtcggtggtcagaggcggctgcgt
gttcacaacctcagtctgaactgcagctctcaactatctgagctctacaagagctgtgag
acagatgcactcatcaacttctttgccaagtcagcataccatgctatactaagccagcca
gtgcggacagtgagggagatacttgtgaggcagacggcccacatgttggcctgctacagg
aagaactgtgctacaccttctgccgccagtcagctgatcctgcccgatgctatgaaagtg
cttccggtgtacatgaacagcctgatgaagacccctgttctggtgggcagcgccgagctc
tctacagacgacagagctttccatagacttagtgtcatgtccatgggagtggaagagagc
caggcgctgctttacccacagctcattccagtgcactccatggacctggcgagtgattca
attccagcagcagtacgctgctctgaggagcgtttggccgagacaggtgtgtttttgctg
gagaacggccagtctatgttcctgtggctgggccatgcctgctcccctgacatcatccag
aacctcttcaatgtgccctcgatggcccacctcagttcagacacgactgtattgccagaa
ctagataacgctcactccaggaagctttactccatcattcttgccatctcgaagcagcgg
tgcaagtccatgaagatggtgattgtgaagcagaaagacagatcagagatgctgttccgt
cagctcctagtggaggataaaggcctgtatggaggagcatcatacttggaattcttgtgc
tcagttcaccgtgagattaggcagcttctgtcttaa
DBGET
integrated database retrieval system
