Clarias gariepinus (North African catfish): 128540292
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Entry
128540292 CDS
T10780
Symbol
ush1c
Name
(RefSeq) harmonin isoform X1
KO
K21877
harmonin
Organism
cgar Clarias gariepinus (North African catfish)
Brite
KEGG Orthology (KO) [BR:
cgar00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
cgar03037
]
128540292 (ush1c)
Cilium and associated proteins [BR:
cgar03037
]
Primary cilia and associated proteins
USH complex and associated proteins
128540292 (ush1c)
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GFIT
Motif
Pfam:
PDZ
USH1C_N
PDZ_6
PDZ_2
Baculo_LEF5_C
Piezo_TM25-28
Motif
Other DBs
NCBI-GeneID:
128540292
NCBI-ProteinID:
XP_053366685
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Position
2:complement(19979098..20000443)
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AA seq
551 aa
AA seq
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MERKVAREFRHKVELLIDNEAEKDYLYDVLRMYHKSMDLPVLAGDLKLVINEPNRLPLFD
AIRPLIPLKHQVEYDNLTPKRSRKLKEVRLDRTHPEGLGLSVRGGIEFGCGLFISQIVKD
GQAGNVGLQVGDEIVRINGYSISSCIHEEVISLIKTKKTVSLKVRHVGMIPVKSSPDEPL
KWQFVDQFVSESGEKKSSVAGLASIGGKEIKEKKVFLSLVGTKGMGISISSGPTQKPGIY
ISNVKPGSLSAEVGLQVGDQIVEVNGVEFTNVDHKEAVRVLKSSRSLTITVLTGAGRELF
MTDEEKLAVEARREIERQELMQQKRVAMETNKIIKEQQEKERMRKMEISQKAAEEEERYR
KEMEKIEAEERKQNREWEEDWGSKEKSKGPSPVHSPSPLSHSPPPSKPRSSAAEADTDED
EDIESGDGFQKYVDDFDPYSMFTPEQIEGKDVRLLRIKKEGPLDLSVEGGIDSPLGKLVV
SNIYEGGSADKHGGVVAGDEIMAVNGKILTDVTLTEGQNSLARAWNSGGDWIDLVIAVSP
PKEYEDEVTFF
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggagaggaaagtagctcgagaatttcgccataaggttgagttgctgattgataatgaa
gcagaaaaggattacctgtatgatgtcctgcgcatgtatcataagtccatggatctgcct
gtcctggcaggggatttgaagctagtgattaatgaacctaaccgcctgcccctctttgat
gctatccggcctcttatacctctcaaacaccaggtggagtatgacaaccttacaccaaag
agatccaggaagctaaaggaagtgcgtttggaccgcactcaccctgaaggcttgggcctg
agtgtacgcggggggatagagtttggatgtggacttttcatctcacagattgtgaaggat
ggacaggctggaaatgtgggtctgcaggtgggagatgagattgtgcgcatcaatggctat
tcaatttcctcctgcatccatgaagaggttatcagccttatcaagactaaaaaaaccgta
tcacttaaagtcagacatgtgggaatgattccagtaaagagttcccctgacgaaccacta
aaatggcagtttgtggatcagtttgtttctgaatcaggagagaaaaagagcagtgttgct
ggtctggcctccattggagggaaagagatcaaggagaaaaaagtcttccttagcctggtt
ggcaccaaaggcatgggcatcagtatctcaagtggaccaactcaaaagcctgggatctac
atcagcaatgtaaagcctggctctttgtctgcagaagtgggcctgcaggtcggtgaccag
attgttgaggtcaatggggtggagtttactaacgtggaccacaaagaggctgttcgagtg
ctgaagagcagcaggagtctaactatcacagtcctcaccggagctggcagggagttgttc
atgacagatgaggaaaaactggcagtagaagctcggcgagagatcgagcgccaggagctc
atgcaacagaaaagagtggcaatggagaccaacaaaatcatcaaagagcagcaagagaaa
gagcgcatgagaaagatggagatttcccagaaggctgcagaagaagaggagagatacaga
aaggagatggaaaagatagaggctgaagagagaaagcaaaacagagagtgggaggaagac
tggggttccaaagagaagtccaaaggtccatctcctgttcattctccttcacctctatca
cattctccacctccatcgaaacccaggagctcagctgctgaagctgatactgatgaagac
gaagatatagagagcggagacggcttccagaaatatgtggacgactttgatccctattcg
atgtttaccccggagcagattgaaggaaaagatgtacggctgctcagaattaagaaggag
ggcccactggacctctctgtggaaggggggatagactctccactgggaaaactcgtggtt
tcaaatatttatgaaggaggttcagctgataagcatggtggagtggtagccggtgatgag
attatggcagtaaatggaaaaatcctgacagatgtgaccctgactgaaggacagaactct
ctagctcgtgcctggaacagtggaggggactggattgaccttgtcatagcagtttctcca
ccgaaggaatatgaagatgaagtgactttcttctaa
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