Cricetulus griseus (Chinese hamster): 100689272
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Entry
100689272 CDS
T02813
Symbol
Ercc2
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPD isoform X2
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
cge
Cricetulus griseus (Chinese hamster)
Pathway
cge03022
Basal transcription factors
cge03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cge00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100689272 (Ercc2)
09124 Replication and repair
03420 Nucleotide excision repair
100689272 (Ercc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cge03021
]
100689272 (Ercc2)
03400 DNA repair and recombination proteins [BR:
cge03400
]
100689272 (Ercc2)
Enzymes [BR:
cge01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
100689272 (Ercc2)
Transcription machinery [BR:
cge03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
100689272 (Ercc2)
DNA repair and recombination proteins [BR:
cge03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
100689272 (Ercc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HBB
DEAD_2
Helicase_C_2
ResIII
DEAD
SesA
Motif
Other DBs
NCBI-GeneID:
100689272
NCBI-ProteinID:
XP_027286709
UniProt:
A0A9J7GHR4
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All DBs
Position
9:complement(27962399..27977165)
Genome browser
AA seq
760 aa
AA seq
DB search
MKLNVDGLLVYFPYDYIYPEQFSYMLELKRTLDAKGHGVLEMPSGTGKTVSLLALIVAYQ
RAFPLEVTKLIYCSRTVPEIEKVIEELRKLLSFYEQQEGEKLPFLGLALSSRKNLCIHPE
VTPLRFGKDVDGKCHSLTASYVRAQYQQDASLPHCRFYEEFDAHGRQVPLPAGIYNLDDL
KALGQRQGWCPYFLARYSILHANVVVYSYHYLLDPKIADLVSKELARKAVVVFDEAHNID
NVCIDSMSVNLTRRTLDRCQSNLDTLQKTVLRIKETDEQRLRDEYRRLVEGLREASAARE
TDAHLANPVLPDEVLQEAVPGSIRTAEHFLGFLRRLLEYVKWRLRVQHVVQESPPAFLSG
LAQRVCIQRKPLRFCAERLRSLLHTLEIADLADFSPLTLLANFATLVSTYAKGFTIIIEP
FDDRTPTIANPILHFSCMDASLAIKPVFERFQSVIITSGTLSPLDIYPKILDFHPVTMAT
FTMTLARVCLCPMIIGRGNDQVAISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFT
SYQYMESTVASWYEQGILENIQRNKLLFIETQDGAETSVALEKYQEACENGRGAILLSVA
RGKVSEGIDFVHHYGRAVIMFGVPYVYTQSRILKARLEYLRDQFQIRENDFLTFDAMRHA
AQCVGRAIRGKTDYGLMVFADKRFARADKRGKLPRWIQEHLTDSNLNLTVDEGVQVAKYF
LRQMAQPFHREDQLGLSLLSLEQLQSEETLRRVEQIAQQL
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcaacgtggacgggctgctggtctatttcccgtacgactacatctacccggag
cagttctcctacatgctggagctcaagcgcacgctggacgccaagggtcatggagtcctg
gagatgccctcaggcaccgggaagacagtgtccctgctggccctgatagtggcctaccag
agggcttttccgctggaggtgaccaaacttatctactgctctcggactgtgccagagatt
gagaaggtcatagaagagcttcgcaagctgctcagcttctatgagcagcaggagggcgag
aagctgccgttcttgggactagctctgagctcaagaaagaacctgtgcattcatcccgag
gtgacaccactgcgctttgggaaggacgtggacggcaagtgtcacagcctcacagcctca
tatgtgcgggcccagtaccagcaggatgccagcctgcctcactgccgcttctatgaggag
tttgatgcccacggacgccaggtgcccctcccggcaggcatctacaacctggatgacctg
aaggccctggggcagcggcagggctggtgcccctacttcctggctcgatactcgatcctg
catgccaacgtggtggtttacagctaccactatctcctggaccccaagatcgcagacctg
gtgtccaaagagctggcccgcaaggccgtcgtggtcttcgatgaagcccacaacattgac
aatgtctgcatcgactccatgagtgtaaacctcacccgcaggactctggaccgctgccag
agcaacttggacaccttgcagaagacggtgctcaggatcaaggagacagacgagcagcgg
ctgcgggacgagtaccggcgcctggtggaggggctgcgggaggccagcgcggcgcgggag
acagacgcgcacctggcgaaccctgtgctgccggacgaggtgctgcaggaggccgtgcca
ggctccatccgcactgccgagcacttcctgggcttcctgcggcggctgctggagtacgtc
aagtggcggctgcgcgtgcagcatgtggtacaggagagccctcctgccttcctgagcggc
ctggctcagcgcgtgtgcatccaacgcaagcccctcaggttctgtgctgagcgcctgcgc
tccctcctgcacaccttggagattgctgacctggctgacttctccccgctcacactcctt
gctaacttcgccactctcgtcagcacttacgccaagggcttcaccattatcatcgagccc
tttgatgacaggaccccgaccattgccaaccccatcctgcacttcagttgtatggacgcc
tccttggccatcaagcctgtgtttgagcgcttccagtctgtcatcatcacctctgggaca
ctgtccccactggacatctaccccaagatcctggacttccaccccgtcaccatggcaacc
ttcaccatgacactggcccgagtctgcctctgcccaatgatcattggccgtggtaatgac
caggtggccatcagctccaaatttgagaccagggaagatattgctgtaatccgcaactac
ggcaacctcctgctggagatgtctgctgtggtccccgacggcattgtggccttctttacc
agctaccaatacatggaaagcaccgtggcctcctggtatgagcagggcatccttgagaac
atccagaggaacaagctgctcttcattgagacccaggacggggcagagaccagtgtggcc
ctggagaagtaccaagaggcgtgtgaaaacggccggggggccattctgctctcggtggct
cggggcaaagtctcagaagggattgactttgtgcaccactatgggcgggctgtgatcatg
ttcggtgtcccctacgtctacactcagagccgaatcctcaaggcccgcctagagtacctg
cgggaccagttccagatccgcgagaatgacttcctcacctttgatgccatgcgccacgca
gcccagtgtgtgggtcgtgccatcaggggcaagacagactatggtctcatggtctttgcc
gacaagcgctttgctcgggctgacaaacgtgggaaactgcctcgatggatccaggagcac
ctgactgactctaacctcaacctgaccgtggacgagggtgtgcaggtcgccaagtacttc
ctgcggcagatggctcaacccttccaccgggaagatcagctgggcctgtcactgctcagt
ctagagcagctacagtcagaggagacgctacggcgggttgagcagatcgcacagcagctc
tga
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integrated database retrieval system
