Cricetulus griseus (Chinese hamster): 100754390
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Entry
100754390 CDS
T02813
Symbol
Col6a2
Name
(RefSeq) collagen alpha-2(VI) chain isoform X1
KO
K06238
collagen type VI alpha
Organism
cge
Cricetulus griseus (Chinese hamster)
Pathway
cge04151
PI3K-Akt signaling pathway
cge04510
Focal adhesion
cge04512
ECM-receptor interaction
cge04518
Integrin signaling
cge04820
Cytoskeleton in muscle cells
cge04974
Protein digestion and absorption
cge05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
cge00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
100754390 (Col6a2)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100754390 (Col6a2)
04518 Integrin signaling
100754390 (Col6a2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
100754390 (Col6a2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
100754390 (Col6a2)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
100754390 (Col6a2)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
100754390 (Col6a2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cge04147
]
100754390 (Col6a2)
00536 Glycosaminoglycan binding proteins [BR:
cge00536
]
100754390 (Col6a2)
Exosome [BR:
cge04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
100754390 (Col6a2)
Glycosaminoglycan binding proteins [BR:
cge00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
100754390 (Col6a2)
Hyaluronan
Extracellular matrix or blood plasma proteins
100754390 (Col6a2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
Ins134_P3_kin_N
Motif
Other DBs
NCBI-GeneID:
100754390
NCBI-ProteinID:
XP_027250073
UniProt:
A0A8C2LE95
LinkDB
All DBs
Position
1
Genome browser
AA seq
1026 aa
AA seq
DB search
MTAIKMLQGSFPVFLLGALLGVLHAQQQEVISPDISTIDRNNNCPEKADCPVNVYFVLDT
SESVAMQSPTDSLLYHMQQFVPQFISQLQNEFYLDQVALSWRYGGLHFSDQVEVFSPPGS
DRASFTKSLQSIRSFRRGTFTDCALANMTQQIRQHVGRGVVNFAVVITDGHVTGNPCGGI
KMQAERAREEGIRLFAVAPNRNLNEQGLRDIANTPHELYRNNYATMRPDSTEIDQDTINR
IIKVMKHEAYGECYKVSCLEIPGPHGPKGYRGQKGAKGNMGEPGEPGQKGRQGDPGIEGP
IGFPGPKGVPGFKGEKGEFGSDGRKGAPGLAGKNGTDGQKGKLGRIGPPGCKGDPGSRGP
DGYPGEAGTPGEQGDQGAKGDSGRPGRRGPPGDPGDKGSKGYQGNNGAPGSPGVKGGKGG
PGPRGPKGEPGRRGDPGTKGGPGTDGPKGEKGDPGPEGPRGLAGEVGSKGAKGDRGLPGP
RGPQGALGELGKQGSRGDPGDAGPRGDSGQPGPKGDPGRPGFSYPGPRGTPGEKGEPGPP
GPEGGRGDFGLKGAPGRKGDKGEPADPGPPGEPGPRGPRGIPGPEGEPGPPGDPGLTECD
VMTYVRETCGCCDCEKRCGALDVVFVIDSSESIGYTNFTLEKNFVINVVNRLGAIAKDPK
SETGTRVGVVQYSHEGTFEAIRLDDERVNSLSSFKEAVKNLEWIAGGTWTPSALKFAYNQ
LIKESRRQKTRVFAVVITDGRHDPRDDDLNLRALCDRDVTVTAIGIGDMFHETHESENLY
SIACDKPQQVRNMTLFSDLVAEKFIDDMEDVLCPDPQIVCPELPCQTELYVAQCTQRPVD
IVFLLDGSERLGEQNFHKARRFVEEVSRRLTLARKDDDPLNARMALLQYGSQNQQQVVFP
LTYNLTTIHEALERTAYLNSFSHVGAGIVHAINNVVRGARGGARRHAELSFVFLTDGVTG
NDSLEESVHSMRKQNVVPTVVAVGSDVDMDVLTKISLGDRAAIFREKDFDSLAQPSFFDR
FIRWIC
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgactgctatcaagatgcttcagggttcttttcctgtgttcctgctgggggcgctcttg
ggagtcctccatgctcagcagcaggaagtcatctcacccgacatctctaccattgacagg
aacaacaactgtccagagaaggctgactgcccagtcaatgtgtacttcgtgttagacacc
tcagagagcgtggccatgcagtcccccacagacagcctgctttatcatatgcaacagttt
gtgcctcagttcatcagccagctgcagaacgaattttacctggaccaggtggccctgagc
tggcgttacggtggcctgcacttctccgaccaggtggaggtgttcagcccaccaggcagt
gaccgggcctccttcactaagagcctccaaagcatccgctccttccgcagaggcaccttt
actgactgcgccctggccaacatgacacagcagatccggcagcatgtaggccgaggggtg
gtcaactttgctgtggtcatcaccgatggccacgtcacaggcaatccgtgtgggggcatc
aaaatgcaagctgagcgcgcccgtgaggagggtatccggctctttgctgtggcccctaac
aggaacctaaatgagcaaggcctgcgagacatcgctaacaccccacatgagctctaccga
aacaactatgccaccatgaggcctgactctactgagattgaccaggataccatcaaccgc
attatcaaggtcatgaaacatgaagcctatggagagtgctacaaggtgagctgcctggag
attcctgggccccatggacccaagggctaccgaggacagaagggtgccaagggcaacatg
ggtgagccaggagagcctggacagaagggtcgacagggagaccctggcatcgaaggcccc
attggattcccaggacccaagggtgtacctggcttcaagggagagaagggtgaatttgga
tccgatggtcggaagggagcccccggcctagctggcaagaatggaactgatggacagaag
ggcaaactgggccgcattgggcctcctggttgcaagggagacccaggaagtcggggcccc
gatggataccctggagaagccggaaccccgggcgagcaaggagaccaaggtgccaagggg
gactctggccgcccaggacgcaggggaccaccaggagatcctggtgacaagggaagcaag
ggatatcaaggcaacaacggagctcctggaagtccgggagtgaaaggaggcaagggaggg
cctggcccacgtggaccaaaaggagagccgggacgcaggggagatcccggaaccaagggc
ggcccaggaactgatggtccaaagggggagaagggagaccctggtcctgagggacctcga
ggcctggctggagaagttggcagcaaaggagccaagggagacagaggtttgcctggaccc
agaggcccccagggggctcttggggagctgggaaaacagggatctaggggagaccctggt
gatgctggaccccgtggagattcaggacagccaggacccaagggagatcctggaaggcct
ggattcagctacccaggaccccgaggaacacctggtgaaaaaggagagcccggtccacca
ggccctgagggaggccgaggagactttggtctgaaaggagcacctggaaggaagggagac
aagggagaaccagctgatcctggtccccctggtgaacctggccctcggggcccaagagga
atcccaggacctgagggagaacccggccctcctggagaccctggtctcacggaatgtgac
gtcatgacctatgtgagggaaacctgtgggtgctgcgactgtgagaagcgttgtggtgct
ctggatgtggtcttcgtcatcgatagctctgagagtatcggctacaccaacttcaccttg
gagaagaactttgtcatcaatgtggtcaacaggctgggtgccattgccaaggaccccaag
tctgagacaggcacacgtgtaggtgtggtgcagtacagccacgaaggcacttttgaagcc
atccggctagacgacgaacgagtcaactccctgtccagtttcaaggaggctgtcaaaaac
ctcgagtggattgctggcggcacctggacaccctctgccctcaagtttgcctacaatcag
ctcatcaaagagagccggcgccagaagactcgggtgtttgcagtggtcatcacagatggg
cgccatgacccccgagatgacgacctcaatcttcgggcgctgtgtgatcgagatgtcact
gtgacggccattggcattggtgacatgttccatgagacgcatgagagtgagaacctctac
tccattgcctgtgacaagccacagcaggtgcgcaatatgacacttttctctgacctggtg
gctgagaagttcatcgatgacatggaagatgtcctttgcccagacccccagatcgtgtgt
ccagaacttccctgccaaacagagctatatgtggcccagtgcacacagcggcctgtggac
attgtcttcctgctggatggctcggaacggttgggtgagcagaacttccacaaggcacgg
cgcttcgtggaggaggtgtcacggcgcctgactctggcacgaaaggatgacgacccactc
aacgcccgcatggccctgttgcagtacggcagccagaatcagcagcaggtggtcttccca
ctgacctacaacttgaccaccatccatgaggcactggagaggaccgcctacctcaattcc
ttttctcacgtgggtgcaggcatcgtgcatgccatcaacaacgtggttcggggcgcacgg
ggcggggcacggcgccacgcagagctctcctttgtcttcctcaccgatggcgtcacgggc
aatgacagcctggaggagtcggtgcactccatgcgcaagcagaacgtggtgcccaccgtg
gtcgctgtgggcagcgatgtggacatggatgtgcttaccaagatcagcctgggtgacagg
gcggccatcttccgggagaaagactttgacagtctggcccagcccagcttcttcgacagg
ttcatccgttggatctgttag
DBGET
integrated database retrieval system
