Campylobacter geochelonis: CGEO_1170
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Entry
CGEO_1170 CDS
T06802
Name
(GenBank) type I secretion system ABC transporter, HlyB family
KO
K11004
ATP-binding cassette, subfamily B, bacterial HlyB/CyaB
Organism
cgeo
Campylobacter geochelonis
Pathway
cgeo02010
ABC transporters
cgeo03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
cgeo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CGEO_1170
03070 Bacterial secretion system
CGEO_1170
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cgeo02000
]
CGEO_1170
02044 Secretion system [BR:
cgeo02044
]
CGEO_1170
Transporters [BR:
cgeo02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
CGEO_1170
Secretion system [BR:
cgeo02044
]
Type I secretion system
alpha-Hemolysin/cyclolysin transporter
CGEO_1170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
Peptidase_C39
SMC_N
ABC_ATPase
DUF87
Zeta_toxin
AAA_29
nSTAND3
AAA_24
AAA_22
RsgA_GTPase
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
QKF71470
LinkDB
All DBs
Position
complement(1284900..1286999)
Genome browser
AA seq
699 aa
AA seq
DB search
MSSSALVCLEICASFFKVSIDSFEIKNRFAISEAEPSIEELTRIAKQSGFKAKLKKLNLA
NLYRYTPPFIAQDRDGVYFTILKLEHESKRAIIYKGGSDTLNISYDELAILSNSKIIILS
NAILSKNIKFGFGWFYKRMLSYKTMVYQILLASFIIQLFGLVTPLFTQVVLDKVLVHHSI
STLNVIAFAFLAVILFEMLLSLSRNYIFAHTTTKIDARLGDELFSHLVLLPMIYFENRKV
GNIVARVRELDSIREFIANKSVTVLLDMLFSIVFVAMMLLYSIKLTLIALAFVTSIALIY
FFITPTLRKRLEEKFQMGAASNSYLVESITGMQTIKSLAIEGSMKKHWEDYLGKYVKSSF
NLSNLSNIASGFAGALQKFMTLCILYFGVGLVIEGRLSVGQLIAFQMFAGQFSAPVMRLV
GLWNELQQALLSVDRLGDILNNPTEQTTDKPIALNNIKGDIKFDNVSFRYSPNSNLVLKN
LNFEIKANKSVGIVGRSGSGKSTITKLIERLYIQSEGSIYIDDLDIRHLNPYILRGHIGV
VLQENYLFSGSIKENICYAKPSASMNEILSVSKASGAHEFIQALPQGYDTLVGERGSSLS
GGQRQRVAIARALLNTPKILIFDEATSALDYESESIINKNLSQIKQNKTFIIIAHRLSTV
KNCDEIIVLDKGEIVERGTHNELMIKNGYYKHLYSQQGL
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
ttgtcatcttcagccttagtttgtcttgaaatttgcgcatctttttttaaggttagtata
gattcatttgagattaaaaacagatttgctataagcgaagctgagcctagtatcgaagag
ctaactaggattgctaagcaaagtggctttaaagccaagcttaaaaagctaaatttagcc
aacctttatcgctatactccaccatttatcgctcaagatagagatggagtttattttact
atcttaaagttagagcacgagagtaaaagagctattatttataagggcggaagtgatact
ttaaatatcagctatgatgagttagccatcttaagcaattctaagattataatcctttca
aacgcgattctttctaaaaacattaaatttggctttggctggttttataaacgaatgctt
agttataaaactatggtttatcaaatccttctagccagttttataatccagctttttggg
cttgtaactccgttgtttactcaagtggttcttgataaagtactggttcatcatagtatt
agcacgcttaatgtgatagcgttcgcctttttagctgttattttatttgaaatgctactt
agtcttagcagaaactatatatttgctcatactacaacaaagattgatgcaaggttgggt
gatgagcttttttcacacttggtattattgcctatgatttactttgaaaacagaaaagtt
ggaaatatagtagctagagtaagagagcttgatagtataagggaatttatagctaacaaa
tcagtcacagtacttcttgatatgctttttagcattgtatttgtagcgatgatgttactt
tatagtattaaacttactttaatagcactagcattcgtaacttcgatagctttaatttac
ttttttataacaccaactcttagaaaaaggcttgaagagaaatttcaaatgggagcagca
tctaactcatacttagttgaaagtattactggtatgcaaacaatcaaatctttagccata
gaaggtagtatgaaaaagcactgggaggactatcttggcaagtatgtaaaatcaagcttt
aacttatccaatctaagtaatatcgcaagcggctttgcaggagcactgcaaaagtttatg
acactatgtatcctttactttggagttggacttgtgatagaagggcgacttagcgttgga
cagttgattgcttttcagatgtttgcaggtcagtttagcgctcctgttatgagactagta
ggattatggaacgaacttcaacaagcgcttctaagtgtagataggctaggcgatattctt
aataacccaaccgagcaaaccacagataagccaatagcgttaaataacataaaaggcgat
attaaatttgataatgttagctttagatactcgccaaactcaaatttggtattaaaaaat
ttaaactttgagataaaggctaataaaagtgtaggcatagtaggaagaagcggaagcgga
aaaagtactataacaaaactaattgagcggctttatatacaaagtgagggctcgatttat
atagatgatcttgacattaggcatttaaacccatatatacttaggggtcatataggagtt
gtcttgcaagagaactatctttttagtggaagtattaaagaaaatatctgttatgcaaaa
ccaagtgcatctatgaatgagattttaagtgttagcaaggctagtggagctcatgagttt
atacaagctctaccgcaaggttacgatacgcttgtgggcgaaagaggctcaagcctaagt
ggaggacaaagacaaagagtagctatagcaagagctcttttaaatactcctaaaatttta
atatttgatgaagcgacttcggcgcttgattatgaaagcgaaagcataataaataaaaat
ctatcccaaatcaaacagaataaaacatttatcattatagctcacaggttaagcactgtt
aaaaactgcgatgagataatagtgcttgataaaggcgagatagtagagcgcggaacacac
aacgaacttatgataaaaaatggatattataagcacctatatagccaacaagggctctaa
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