Corynebacterium guangdongense: CGUA_02340
Help
Entry
CGUA_02340 CDS
T09371
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
cgf
Corynebacterium guangdongense
Pathway
cgf03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cgf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CGUA_02340 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cgf03021
]
CGUA_02340 (rpoB)
03400 DNA repair and recombination proteins [BR:
cgf03400
]
CGUA_02340 (rpoB)
Enzymes [BR:
cgf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CGUA_02340 (rpoB)
Transcription machinery [BR:
cgf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CGUA_02340 (rpoB)
DNA repair and recombination proteins [BR:
cgf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CGUA_02340 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_2
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Peptidase_M23
DUF6360
Motif
Other DBs
NCBI-ProteinID:
WJZ17064
LinkDB
All DBs
Position
489887..493360
Genome browser
AA seq
1157 aa
AA seq
DB search
MAVSRQTKSVADIPGTPKRYSFAKITEPVEVPGLLDVQLDSFAWLVGAPDWRAREQEERG
QDTRITSGLEDILEELSPITDYSGNMSLTLSEPRFEPVKHSVDECKEKDMNYSAQLYVTA
EFENKESLEIKSQTVFIGDFPLMTDKGTFIVNGTERVVVSQLVRSPGVYFDMSIDKSTER
PLHAVKVIPSRGAWLEFDVDKKDTVGVRIDRKRRQPVTVLLKALGWSTEKITERFGFSEL
MMTTLENDGIANTDEALLEIYRKQRPGEQPTRDLAMSLIENAFFNAKRYDLAKVGRYKVN
RKLGLGGDHDGLTTLTEEDIATTIEYLVRLHAGEREMTSPDGTTIPLNTDDIDHFGNRRL
RTVGELIQNQVRVGLSRMERVVRERMTTQDAEAITPTSLINVRPVSAAIREFFGTSQLSQ
FMDQNNSLSGLTHKRRLSALGPGGLSRERAGIEVRDVHPSHYGRMCPIETPEGPNIGLIG
SLAQYARVNPFGFIETPYQKVVDGRVTGEIDFLTADEEDRYAIAQATTEQDEDGNLVEER
IEVRLKDGDIAVASAANVDYLDISPRQMVSVGTAMIPFLEHDDANRALMGANMQKQAVPL
LRAESAYVGTGIESRAAYDAGDMVISVKAGVVENVSADYITIMDDNGIRDSYQLRKFERT
NQGTCYNQKPLVDLGQRVEAGQVIADGPGTKDGELALGRNLLVAFMPWEGHNYEDAIILN
QSVVEQDILTSIHIEEHEIDARDTKLGAEEITREIPNVSEDVLRDLDDRGIVRIGADVRD
GDILVGKVTPKGETELTPEERLLRAIFGEKAREVRDTSLKVPHGEQGKVIGVTRFSREDD
DDLAPGVNEMIRVYVATKRKIQDGDKMAGRHGNKGVVGKILPPEDMPFMADGTPVDIILN
THGVPRRMNIGQVLEIHLGWLAHAGWTVDPEDPKNEELIKTLPKELYDVPAGSLTATPVF
DGASNQELAGLLANSKPNRDGDVMVDPDGKAQLFDGRSGEPFKYPVSVGYMYMLKLHHLV
DEKIHARSTGPYSMITQQPLGGKAQFGGQRFGEMEVWAMQAYGAAYTLQELLTIKSDDVV
GRVKVYEAIVKGDNIPDPGIPESFKVLLKELQSLCLNVEVLSADGTPMELTGDDDDEATS
SLGINLSRDEGSSADIA
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
ttggcagtctcccgccagaccaagtcagtggccgacatccctggaactccgaagcgatac
tctttcgcgaagatcacggagccagtcgaagtcccgggcctcctcgacgttcagctcgat
tctttcgcatggctcgtcggtgcgcctgattggcgcgcccgcgagcaggaagagcgtggg
caggacacccgcatcacgagcggactcgaggacatcctggaggaactcagcccgatcacc
gattactcgggcaacatgtccctgaccctctccgaaccgcgcttcgagccggtcaagcac
tccgtcgacgagtgcaaggagaaggacatgaactactccgcgcagctctacgtcaccgcg
gagttcgagaacaaggagtctctcgaaatcaagtcccagaccgtgttcatcggcgatttc
ccgctgatgaccgacaagggcaccttcatcgtcaacggcaccgagcgtgtcgtcgtctcc
cagctcgtccgctccccgggcgtgtacttcgacatgtccatcgacaagtcgaccgagcgc
ccgctgcatgcggtcaaggtcatcccgtcccgcggcgcctggctggagttcgacgtcgac
aagaaggacaccgtcggcgtccgcatcgaccgcaagcgtcgtcagccggtcaccgtgctg
ctcaaggcgctgggttggtccaccgagaagatcaccgagcgcttcggcttctccgagctg
atgatgaccaccctcgagaacgacggcatcgccaacacggacgaggccctgctcgagatc
taccgcaagcagcgcccgggtgagcagccgacccgcgatctggccatgagcctgatcgag
aacgccttcttcaacgccaagcgctacgacctggccaaggtcggccgctacaaggtcaac
cgcaagctcggcctgggcggcgaccacgacggtctgaccaccctgaccgaagaggacatc
gccaccaccatcgagtacctcgtgcgtctgcacgccggtgagcgcgagatgacctccccg
gacggcaccaccatcccgctgaacaccgacgacatcgaccacttcggcaaccgtcgtctg
cgcaccgtcggcgagctgatccagaaccaggtccgcgtcggcctgtcccgcatggagcgt
gtcgtgcgcgagcgcatgaccacccaggacgccgaggccatcaccccgacctcgctgatc
aacgtgcgcccggtctccgcggccatccgcgagttcttcggcacctcccagctgtcccag
ttcatggaccagaacaactcgctgtcgggcctgacccacaagcgtcgtctgtccgcgctg
ggcccgggcggtctgtcccgtgagcgcgccggcatcgaggtccgagacgtccacccgtcc
cactacggccgcatgtgcccgattgagacccctgagggaccgaacatcggtctgatcggc
tccctggctcagtacgcgcgcgtcaaccccttcgggttcatcgagaccccgtaccagaag
gtcgtcgacggccgcgtcaccggtgagatcgacttcctcaccgccgacgaggaggatcgc
tacgccatcgcgcaggcgaccaccgagcaggacgaggacggcaacctggtcgaggaacgc
atcgaggtccgcctcaaggacggcgacatcgccgtcgcctcggccgccaacgtcgactac
ctcgacatctccccgcgccagatggtctccgtcggcaccgccatgattccgttcctggag
catgacgacgccaaccgtgccctcatgggcgccaacatgcagaagcaggcggtgccgctg
ctgcgtgcggagtccgcctacgtcggcaccggcatcgagtcccgcgccgcctacgacgcg
ggtgacatggtcatctccgtcaaggccggtgtggtggagaacgtctccgccgactacatc
accatcatggacgacaacggcatccgtgactcctaccagctgcgcaagttcgagcgcacc
aaccagggcacctgctacaaccagaagccgctggtcgacctcggccagcgtgtcgaggcc
ggccaggtcatcgccgacggcccgggcaccaaggacggcgagctcgccctcggccgcaac
ctgctggtcgccttcatgccgtgggagggccacaactacgaggatgcgatcatcctcaac
cagtccgtggtcgagcaggacatcctgacctccatccacatcgaggagcacgagatcgac
gcccgcgacaccaagctcggtgccgaggagatcacccgtgagatcccgaacgtgtccgag
gacgtcctgcgcgacctcgacgaccgcggcatcgtgcgcatcggcgccgacgtccgcgac
ggcgacatcctcgtcggcaaggtcaccccgaagggcgagaccgagctgaccccggaggag
cgtctgctgcgcgccatcttcggcgagaaggcccgcgaggtccgcgacacctccctgaag
gttccgcacggtgagcagggcaaggtcatcggcgtcacccgcttctcccgcgaggacgac
gacgatctggccccgggcgtcaacgagatgatccgcgtctacgtcgccaccaagcgcaag
atccaggacggcgacaagatggccggccgccacggcaacaagggcgtcgtcggcaagatc
ctcccgccggaggacatgccgttcatggccgacggcacgccggtcgacatcatcctgaac
acccacggtgttccgcgccgtatgaacatcggccaggtcctcgagatccacctgggctgg
ctggcgcacgccggctggaccgtggacccggaggacccgaagaacgaggaactgatcaag
accctgccgaaggagctctacgacgtcccggccggctccctgaccgccaccccggtgttc
gacggcgcctccaaccaggagctcgccggcctgctggccaactccaagccgaaccgggac
ggcgacgtcatggtcgacccggacggcaaggcccagctcttcgacggccgctccggcgag
ccgttcaagtacccggtctccgtgggctacatgtacatgctcaagctgcaccacctggtc
gacgagaagattcacgcccgttccaccggcccgtactccatgatcacccagcagccgctg
ggcggtaaggcgcagttcggtggccagcgcttcggcgagatggaggtgtgggcgatgcag
gcgtacggcgccgcctacaccctccaggagctgctgaccatcaagtccgatgacgtcgtc
ggccgcgtgaaggtctacgaggccatcgtcaagggcgacaacatcccggatccgggcatc
ccggagtccttcaaggtcctcctcaaggagctgcagtccctgtgcctgaacgtcgaggtc
ctctcggccgacggcaccccgatggagctcaccggcgacgatgacgacgaggccacctcc
tcgctgggcatcaacctgtcccgcgacgagggctcctcggcggacatcgcctaa
DBGET
integrated database retrieval system
