Corynebacterium glutamicum SCgG2: C629_06605
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Entry
C629_06605 CDS
T02691
Name
(GenBank) hypothetical protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
cgg
Corynebacterium glutamicum SCgG2
Pathway
cgg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cgg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C629_06605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgg03019
]
C629_06605
03009 Ribosome biogenesis [BR:
cgg03009
]
C629_06605
Enzymes [BR:
cgg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
C629_06605
Messenger RNA biogenesis [BR:
cgg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
C629_06605
Ribosome biogenesis [BR:
cgg03009
]
Prokaryotic type
rRNA helicases
C629_06605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
UvrA_inter
CMS1
adh_short
Motif
Other DBs
NCBI-ProteinID:
AGN21923
LinkDB
All DBs
Position
1401701..1403890
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AA seq
729 aa
AA seq
DB search
MSNTENVNGDVEQPNNVISSESQETPQGDSASADFALETPTNTVEDAPASEGSEEITRVA
DTSEDADSADADNASNVINENEDSSEGANQPSNESSSTEAKSGFDALGLPERVLDAVRKV
GYETPSPIQAQTIPILMEGQDVVGLAQTGTGKTAAFALPILSRIDKSVRSPQALVLAPTR
ELALQVADSFQSFADHVGGLNVLPIYGGQAYGIQLSGLRRGAHIVVGTPGRIIDHLEKGS
LDISGLRFLVLDEADEMLNMGFQEDVERILEDTPDEKQVALFSATMPNGIRRLSKQYLNN
PAEITVKSETRTNTNITQRFLNVAHRNKMDALTRILEVTEFEAMIMFVRTKHETEEVAEK
LRARGFSAAAINGDIAQAQRERTVDQLKDGRLDILVATDVAARGLDVERISHVLNFDIPN
DTESYVHRIGRTGRAGRTGEAILFVTPRERRMLRSIERATNAPLHEMELPTVDQVNDFRK
VKFADSITKSLEDKQMDLFRTLVKEYSQANDVPLEDIAAALATQAQSGDFLLKELPPERR
ERNDRRRDRDFDDRGGRGRDRGDRGDRGSRFDRDDENLATYRLAVGKRQHIRPGAIVGAL
ANEGGLNSKDFGRITIAADHTLVELPKDLPQSVLDNLRDTRISGQLINIERDSGGRPPRR
FERDDRGGRGGFRGDRDDRGGRGRDRDDRGSRGGFRGGRDRDDRGGRGGFRGRDRDDRGG
RGGYRGGRD
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgagtaataccgagaacgtcaacggcgacgtagaacagccgaataacgtcatttcgtcg
gaatctcaggaaaccccgcagggtgactcagcatcagctgacttcgctctcgaaacccca
accaacactgttgaagatgcaccagcatctgagggtagcgaagagatcaccagggttgcg
gatacttctgaggacgccgactctgcagatgcagacaacgcgagcaatgtaatcaatgag
aatgaggactcctcggaaggtgctaaccagccttcaaacgagtcatcctctacggaagcc
aagtccggcttcgatgcactcggactgccagagcgtgttcttgacgctgtgcgcaaggtg
ggttacgaaactccttccccaattcaggcacaaaccatcccaatcctcatggagggccag
gatgttgttggtctagcacagaccggtaccggtaagaccgcagctttcgcgctgccaatc
ctttcccgtattgacaagtccgtgcgcagcccacaggcacttgtgcttgcccctacccgt
gagctggcacttcaggttgctgactccttccaatccttcgctgaccacgtcggtggcctg
aacgttctgccaatctatggtggacaggcttacggcattcagctctctggcctgcgtcgt
ggcgctcacatcgtcgtgggtaccccaggccgaatcatcgaccacctcgaaaagggctcc
ctggatatctccggactgcgcttcctcgtgctcgatgaagcagacgagatgctgaacatg
ggcttccaggaagatgtcgagcgcatcctcgaggacaccccagacgagaagcaggttgca
ctattctccgcaacgatgccaaacggcattcgtcgcctgtccaagcagtacctgaacaac
cctgctgaaatcaccgttaagtccgagaccaggactaacaccaacatcacccagcgcttc
ctcaacgttgcacaccgcaacaagatggatgccctgacccgtattctcgaggtcaccgag
tttgaagcaatgatcatgttcgtgcgtaccaagcacgagactgaagaagttgctgaaaag
ctccgtgcacgcggattctccgcagctgccatcaacggcgacattgctcaggcacagcgt
gagcgcaccgtcgaccagctgaaggacggccgcctagacatcctcgttgcaaccgacgtt
gcagcccgtggtcttgacgttgagcgcatctcccacgtgcttaactttgacattccaaac
gacaccgagtcctacgttcaccgcatcggccgcaccggccgtgcaggtcgtaccggcgag
gcaatcctgttcgtgaccccacgtgagcgtcgtatgcttcgctccatcgagcgcgcaacc
aacgcaccactgcacgaaatggaactgccaaccgtcgatcaggtcaacgacttccgcaag
gtcaagttcgctgactccatcaccaagtccctcgaggacaagcagatggacctgttccgc
accctggtcaaggaatactcccaggccaacgacgttcctctagaggacatcgcagcggca
ctggcaacccaggcacagtccggcgacttcctgctcaaggagctcccaccagagcgccgc
gagcgcaacgaccgccgtcgtgaccgtgacttcgacgaccgtggtggacgtggacgcgac
cgtggcgaccgcggagatcgtggctcacgcttcgaccgcgacgacgagaacctggcaacc
taccgcctcgcagtgggcaagcgccagcacatccgcccaggcgcaatcgttggtgcactt
gccaacgaaggtggcctgaactccaaggacttcggccgcatcaccatcgcagccgaccac
accctggttgaactgccaaaggacctcccacagagcgttcttgacaacctgcgcgacacc
cgcatctccggccagctcatcaacatcgaacgcgactccggtggacgcccaccacgccgc
ttcgagcgcgatgaccgtggcggacgcggcggattccgcggcgaccgtgatgaccgcggt
ggacgtggacgtgaccgtgacgatcgtggaagccgtggaggtttccgcggtggacgtgac
cgtgatgatcgtggcggacgcggtggattccgcggacgcgatcgtgatgatcgtggcggc
cgtggcggttaccgtggcggacgcgattaa
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