Carassius gibelio (silver crucian carp): 127947086
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Entry
127947086 CDS
T08819
Name
(RefSeq) DNA-binding protein RFX7-like isoform X1
KO
K09175
DNA-binding protein RFX7
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgib03000
]
127947086
Transcription factors [BR:
cgib03000
]
Eukaryotic type
Other basic domains
RF-X
127947086
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFX5_N
RFX_DNA_binding
Pox_D5
Cdc6_C
Motif
Other DBs
NCBI-GeneID:
127947086
NCBI-ProteinID:
XP_052399977
LinkDB
All DBs
Position
A25:complement(1068078..1082512)
Genome browser
AA seq
1571 aa
AA seq
DB search
MNLTVMADDQQLPGAPGTSLQSPEATALQYNKIKNSICKSVQSKVESILQDVEKFTDIEK
LYLYLKLPSSPSSGNDKRTENQRGSASPAICDQNSMSSSRTQQMYAFNWIRNHLEEHPET
SLPKQEVYDEYKSYCDNLGYHPLSAADFGKIMKNVFPNMKARRLGMRGKSKYPFVWKYLT
AYILILRYRRFQPVETPKASQHLLSKHFVFIENCCDPLQCVTYCYSGLRKKAFVHMPSLP
NLDLHKAGDGCELLESTGQSPSAEDEMRSAACGLVCEWAQKVLSRQFDSVEELARFLLNS
HYIGTKSMAALTVMTGTPTGMKTPTPASAFVPTGEANLFQPQVKTLPSPSVDAKQQLQRK
IQKKQQEQKLTSPLPTDAQARRAEAGTPGPGSSLTSGSPALLSPQPTIGIVVTAVPSPIT
VQRNRQLMTSPSPVGAAEGKVVPVNFQVVTQPVKQSPKTPQNIPASPVGDRLARHRYAQI
LPKPSATSAIALRSPQTLLITNSPIKTVMPTPHVSSVNVVKMTAISLAPNSSSSNSITPT
PLRPASTGISSTAFLEESSQIQLAQNGASVMSLQSSGKTGRPSTTPTPSASTVTSEVKVT
FEAVNDSYSATAVDKQITASGARTGLKNERATKFRASSEPSLLIKASPVPERVTRAKSDS
TTPSSTIMGALAPSSNNNNDHPESTLYLTVTSQNVDAELSSICAMATASTSSKDAVLGPK
SPRKRSASVLETHTIPVKRVFISQQPLDSGSNAKPGLVIAAKKIHRPGTPARPESAPCKV
TLKQSSSLPTQILALSDTPIGALDISQMVNPQSSLQLANEAADISQNETAPAKSTVLLQQ
ISSHQQISSDVSQEVSTISELKSSLQDYSQQMQTEHKQIAANPLPLTAQETETTSQLTLQ
QDIVDFEGAQASMDYFPFNDDDMTQDSIVEELVQMEEQMKLNSSLQSYLSCVDISLQGQA
TVGQGTILSPHQTSAQFYHSSHSSATPIHTPTPTPTPTPTPTPTPTSEMLPGGHCLTRES
PCSRMAPVTPVDSFLGGRHTPISTPLSNCSSSVPPSPIECRNPFAFTPINSSITGYHDGS
VVSSSPVKPMQRPMATHPDKAKLEWINNRYNSTAGSPVISTSSTIGILPSYQDLVEDHFR
KPHAFAIPGQSLQCQSRHQDGNLGRLTTVSPVQQGQQTTLSSKQESFAIPAPLDNKGAGS
TSTSGGGTFRCRSVSPAVRQRNLSGTTAQTVTTPRSVVSPFNCPLTSEVLNILSNNQSVV
SASSLAQRSQSVPLNIMMQSELLPISHQAQQSNSAKITTVLLNKMDTDGDDTVRGLGVNN
LPANYTARMNLTQILETTQGFPGGPNSQNQQLPLDTSPLPFDFQKTGYLISAGEEQVSFS
TGDSRAQSGSGLQQPEEQLQLQEQDQQLQLQNQQLQLQDTQLQLQDQQQLQVDPGLTQQH
LLLQTSQQVVDQEQQEQLDFNTTVKDLLGEDSLNPSSQLVGQVASELSAVASDFSNDIRL
TSDLSSSINDLNTLDPNLLFDPSQQQDQYEDATLEELKNDPLFQQICSDTVNSAGFDWLE
NKDQPTVEMLG
NT seq
4716 nt
NT seq
+upstream
nt +downstream
nt
atgaatctcaccgtgatggctgatgatcaacaactgcccggtgctcccggaacgtcactg
cagagccccgaggccacggcgctgcagtacaacaagatcaagaactcgatttgcaaatca
gtacaatcaaaagtggagagtatcttgcaagatgttgagaagtttacagatatcgaaaag
ctctacctctaccttaagttgccttctagtcccagtagtggcaatgacaaaagaactgaa
aatcagaggggctctgcaagtcctgcaatatgcgaccagaattccatgtcgtccagtcgg
actcaacagatgtacgcattcaactggatccgaaatcacttggaagagcacccagaaacc
tcactgccaaaacaagaggtgtacgacgaatacaagagttattgcgacaatctgggttac
catcctttaagcgcagctgattttgggaagatcatgaaaaatgtttttccgaacatgaag
gcacgccgtttgggcatgagggggaaatcaaaatatccttttgtgtggaaatatcttact
gcctatattttgattttgagataccgtaggttccaacctgttgaaacacctaaagcttca
caacatttgctttcgaaacattttgtgttcattgagaattgttgtgaccctttacaatgt
gttacgtactgctatagtggactgagaaaaaaagcctttgtgcacatgccatcactccct
aacctggacttacacaaagcaggagatgggtgtgagttgttggagtcgactggacagtct
cccagtgctgaggatgagatgcgctcggcagcttgcggtcttgtctgcgaatgggctcag
aaggttttgagtcgccagtttgacagtgtggaggaattggcacgctttcttctcaacagt
cactatataggcactaaatccatggcagctcttactgtcatgactggaaccccaacaggt
atgaaaacccctacgcctgcctctgcctttgtgccaactggtgaagccaacttattccag
ccgcaagtgaaaaccctcccttcgccttctgtagatgccaaacaacagctgcagcggaag
atccagaagaaacagcaggagcagaagctcacctctcctttgcccactgatgcccaggcc
agaagggcagaagcgggcacacccggccctggatccagcctgacctctggaagtcctgca
ctactgtcccctcaacccaccataggcatcgtggtcactgctgttccaagtcctatcaca
gttcagagaaaccggcaactaatgacctctccaagtcccgttggggcagcagagggaaaa
gttgtacctgttaacttccaggttgtgacacaacctgttaagcagtctccaaaaacgccc
caaaatatccctgccagcccagtcggtgacaggttggccagacaccgatatgcccagatt
ttacctaaaccttctgccacaagcgccattgcacttcgctcgccccaaacgcttctgatc
accaacagccccatcaagacggtgatgcccacgccccacgttagctcggtcaatgtggtc
aagatgactgcaatttcattagcgcctaacagtagcagtagtaatagtattactcctacc
cctttgagacctgcttcgacaggaatcagtagcacagctttcctggaagaatctagccaa
atccagctagcgcagaatggggcatctgtcatgtctcttcagtcatctgggaaaactgga
cgtccctctacgaccccaaccccatcagcatccactgttactagtgaggtaaaagtgaca
tttgaagctgtgaatgacagttactcagctactgctgttgataaacaaatcactgcatca
ggggcaagaacaggactaaagaatgaaagagccactaaattcagggcttccagtgaaccc
tctcttcttattaaggcgtcccctgtgcctgagagagtgacaagggccaagagtgactcc
acaaccccttcaagtacaatcatgggggctcttgccccgagcagcaataacaacaacgat
cacccagaaagtactttgtatttaactgttactagccagaatgtagatgctgaattgtca
tccatttgtgcgatggcaactgcaagcacttcttctaaagatgctgttcttggtccaaaa
agccctcgtaaacgttctgcatctgttttggaaacccatacaatcccagttaaaagagta
ttcatttcccagcaacctttagatagtggaagcaatgccaagcctggtcttgtaatagca
gctaagaagatacacagacctggcactccagcaagaccagagagcgctccatgcaaagtt
acactaaaacagagtagctctcttccaactcaaatcttagctctttctgacactcctatt
ggagccctggacatctcccagatggttaatcctcagagctctttacaactcgcaaatgaa
gctgctgatattagccagaatgaaactgctcctgctaaaagcacagttttactgcagcaa
atctcaagtcaccaacaaatcagcagtgacgtttctcaggaggtatctactataagtgag
ctcaagagttcactgcaagactactcgcaacagatgcaaacagaacacaaacagattgcc
gctaatccattaccgttgaccgcccaggaaactgagaccactagtcagctcactcttcag
caggacattgttgattttgaaggagcccaagcaagcatggactattttcccttcaatgat
gatgatatgacccaggacagtattgtagaagagcttgtacagatggaggaacagatgaag
ctgaatagcagcttgcaatcctacttgagctgtgttgatatatccctacaaggtcaagcc
acggttggccaaggaacaatcctgtcgccccatcagacaagtgcacagttctatcattcg
tctcacagtagcgccacgccaatccacacgccaactccgacacccacaccgacaccaaca
cctactccaactcctacctctgagatgctaccagggggtcattgcttgaccagagaaagt
ccttgttctcgaatggctcctgttaccccagtggatagcttcttgggtgggcgccataca
cccatcagtactccactgtctaactgcagcagcagtgttcctccgagtcccatcgaatgc
cgcaatccctttgcgttcactcctataaactctagtataactggatatcacgatggtagc
gttgtgtccagcagtccagtgaaacccatgcaaagaccaatggccacccacccagataaa
gccaagctggagtggatcaacaacaggtacaacagcaccgcagggtctcctgttatctcc
accagctccaccattggcatcctgcccagttaccaggatctggtggaggaccacttccgt
aaaccacatgcttttgccatcccaggtcaatctctccagtgtcaatcaaggcatcaagac
ggaaacttggggaggttgacaaccgtttctccagtgcaacaaggacagcaaaccaccctt
agtagcaagcaagaaagttttgccatcccagctccgttggacaataaaggagcaggaagc
acatctacatctggaggtggaaccttccggtgtcgcagcgttagcccagcagttcgtcag
cgtaaccttagcggcaccactgcacaaacagtcaccactccacggtctgttgtttctccc
tttaactgccccttgacatctgaggtcctgaacattttgtccaacaaccagtctgtggtc
agtgccagcagcttggcccagaggagccaatcagttccactgaacatcatgatgcagtct
gagctgcttcccatcagtcaccaggcgcagcaaagcaatagtgctaaaatcaccaccgtg
ctccttaacaagatggacacggatggagacgacacagtgcgagggcttggtgtaaataat
ctgcccgccaattatacagcacggatgaacttaacccaaatcctggagacgacacagggc
ttccccggaggccccaactctcagaaccagcagctgcctctggacacaagccctttgcct
tttgacttccagaagacgggttacctcataagtgcgggagaggagcaagtctccttctcc
actggtgacagtcgagcacaatcaggctcaggactgcagcaaccagaagagcagcttcag
ctccaggaacaagatcaacagctacaactccagaatcaacagcttcaacttcaagacaca
cagttgcagctccaggaccaacaacagttacaagttgacccaggtctcacccagcagcac
ttgttgctccaaacctcgcagcaggttgtggatcaggagcagcaagagcaactggacttc
aacactaccgtcaaggatctcttgggggaggacagcctcaaccccagttcccaactcgtc
ggacaggtggcgtcagagctcagtgctgtcgcctctgacttttcgaacgatatccggttg
acttctgacctttcgagtagcattaacgacttgaacactttggaccccaacttgctgttt
gaccctagtcagcagcaggaccaatatgaagacgccacactggaagagctaaagaacgat
cctctgtttcagcagatttgcagcgatactgtgaattctgctggtttcgattggctggag
aataaagaccagccaactgtggaaatgttgggatga
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integrated database retrieval system
