Carassius gibelio (silver crucian carp): 127950577
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Entry
127950577 CDS
T08819
Name
(RefSeq) voltage-dependent P/Q-type calcium channel subunit alpha-1A-like isoform X1
KO
K04344
voltage-dependent calcium channel P/Q type alpha-1A
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04010
MAPK signaling pathway
cgib04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
127950577
04020 Calcium signaling pathway
127950577
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cgib04040
]
127950577
Ion channels [BR:
cgib04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
127950577
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Chordopox_G3
Motif
Other DBs
NCBI-GeneID:
127950577
NCBI-ProteinID:
XP_052403680
LinkDB
All DBs
Position
A3:complement(18334307..18415547)
Genome browser
AA seq
2403 aa
AA seq
DB search
MGTQRCRRCPLAIDASTFCHCVFLHRILSRLDWFFCTVMPVMGLAKRMTPYQMARFENEV
PSRYGGGPGHAQGGPGRGGSRQGGPPGQRMYKQSMAQRARTMALYNPIPVRQNCFTVNRS
LFIFSEDNFVRKYAKKITEWPPFEYMILATIIANCIVLALEQHLPDGDKTPMSERLEDTE
PYFIGIFCFESGIKILALGFAFHKGSYLRNGWNVMDFVVVLTGILSTVGTDLDLRTLRAV
RVLRPLKLVSGIPSLQVVLKSIMKAMIPLLQIGLLLFFAILMFAIIGLEFYMGKFHTTCF
DKITDEIREEFPCGKEAPARTCPNGTECKLYWIGPNYGITQFDNILFAVLTVFQCITMEG
WTDLLYYSNDASGSAWNWMYFIPLIIIGSFFMLNLVLGVLSGEFAKERERVENRREFLKL
KRQQQIERELNGYLEWICKAEEVILADEDNDPDDRIPFDGSRRRPTIKKNKTDLLDAEDR
DGDIGSPFARGSLKSSKLEGSSFHKKERRLRFFIRHIVKTQAFYWSVLCLVGLNTLCVAA
VHYDQPETLSDFLYFAEFIFLGIFMSEMCIKMYGLGTSPYFHSSFNCFDCIVICGSIFEV
LWAIIQPGTSFGISVLRALRLLRIFKVTKYWASLRNLVVSLLNSMKSIISLLFLLFLFIV
VFALLGMQLFGGQFNFEAGTPPTNFDTFPAAIMTVFQVLTGEDWNMVMYDGIESQGGVRK
GMVFSVFFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKDEQEEEQAANKKMALQAAKEV
AEVSPLSAANLSIAAVTVSSERLDATEHFLDCMEQQKNHIGCKSVWEQRTTQLRRQTLVN
SREVLYNELDPEDRWKVAYSRHIRPDMKTHLDRPLVVDPQENRNNNTNKTRPGDGQPRRT
HQLLHKQPSFNEGESGGSGPWTALERGDSTGSRRSLLGSENHGEGRECHRRHQHSERCSQ
ARQHRKAAEDEGEGEGGGRRHRSKGRERGPETQERKHKHHRHEGEGRKERGVRHRTRKDG
HGSGLTLSTTRPIQKTLSRQDSQYSEDLDNAMNNKLATQPPRNSTPHDSLLNLANSAHTA
GLTHTGTESNLIPTNPSSTPANVTSTGHLGMNPDYTAVDIPPMFPSSNAVLQVNRNANTE
PLPKKEDTKADDDDDEKDDGGPKPMPPYTSMFILTTTNPFRRLCHYIVTLRYFEMCILLV
IAMSSISLAAEDPVWPESPRNNVLRYFDYVFTGVFTFEMLIKMVDLGLVLHQGSYFRDLW
NILDFIVVSGALVAFAFTGSSKGKDISTIKSLRVLRVLRPLKTIKRLPKLKAVFDCVVNS
LKNVLNILIVYMLFMFIFAVVAVQLFKGRFFYCTDESKELERDCRGEYLVYERDNEVRAQ
KREWKKYDFHYDNVLWALLTLFTVSTGEGWPQVLKHSVDATYENQGPSPGYRMEMSIFYV
VYFVVFPFFFVNIFVALIIITFQEQGDKMMEDYSLEKNERACIDFAINAKPLTRHMPQNK
QTFQYRMWEFVVSPPFEYTIMALIALNTIVLMMKYDGASDTYEAVLANLNMVFTSLFSME
CILKIIAFGVLNYFKDAWNIFDCVTVLGSITDILVTELGNNFINLSFLRLFRAARLIKLL
RQGETIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQLFGNIAIEEDGESAINQHNN
FRTFFQALMLLFRSATGEAWHEIMLSCLGKKQCDSHFGNVEPECGSEFAYLYFVSFIFLC
SFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEYVRIWAEYDPAACGRIHYKDMYSLLRV
IDPPLGLGKKCPHRVACKRLLRMDLPVADDNTVHFNSTLMALIRTALDIKIAKGGEGGVD
KHQMDAELRKEMMAIWPNLSQKNLDLLVTPHKSATDLTVGKIYAAMMIMEYYRQSKAKRT
QAIHDEQNRTPLMFQRLEPPSPSQDVGQGLTGLPETQQQPVNHLPVDDRIPESQSWVTAR
AQEMSQKAGSWSPEGQNPDNTADNCRQSQTVEMREMGQDEYSDTEHYLPMEGHGRAASMP
RLPADNQQTITDNSLMKRSVSSLGHGRQGRSVRGEDYAMDRVIPEEGHRHGHRHRDRNHR
ASERSLSRYTDADTAGLGTDLSTTTQSGDLPSTERDRGRAKDRKHHHHHHHHNGSLDKEH
YGHERERGDYGHRQSRERDRRWSRSPSEGRECLTHRQGSSSVSGSPVPSTSGTSTPRRGR
RQLPQTPATPRPHVTYSPVVRKPIGGTPPPGQQNRLPAPTSRRFSPPGPEPPLPPHHHPS
PPNHGSPHSSRHAHWGPSPAESVEGDGFYDDQDYEFNHHKPPSYEQSPVQGNPHPHSPRT
SRHSTPPHGQPNPRRMPNGYRSSSPPPHHHTPNHQGTHKPPHPRGPRKGLHEPYSETDED
DWC
NT seq
7212 nt
NT seq
+upstream
nt +downstream
nt
atgggaacacagagatgtcgccgctgtcccctcgcgattgatgcttctactttctgtcac
tgtgtgttccttcataggattttatcacggttggattggttcttttgcactgtaatgccg
gtgatgggtcttgcgaaaaggatgacaccttaccaaatggctcggttcgaaaacgaggtg
ccgtccaggtatggcggaggcccgggacacgctcaagggggccccggccgcggcggcagc
agacaggggggcccgccgggtcagagaatgtacaagcagtcaatggcccagcgagccaga
actatggccctctacaaccccataccagtgcggcaaaactgcttcactgtcaaccgatct
ctgttcatcttcagtgaggacaactttgtgagaaaatacgccaaaaagatcaccgaatgg
cctccatttgagtacatgatcctggctaccatcatcgctaactgcatcgtcctggccctg
gaacagcaccttccagacggggacaagacaccgatgtcagagcgcttggaagacacagaa
ccctacttcatcggcattttctgtttcgagtcaggcattaagatcttggctttgggcttt
gccttccataagggctcatacctacgcaatggctggaatgtcatggactttgtagtggtg
cttactggaatcctgtccacagtgggcacagaccttgatctgaggacgctgcgtgctgtt
cgggtgttgagacccctcaaactggtgtctgggattcccagcttgcaggttgtgcttaaa
tccatcatgaaggccatgatccctcttctgcagatcggtctgttgctcttctttgccatc
ctcatgttcgccatcattggtctggagttctacatgggcaaatttcacaccacttgcttt
gacaaaatcaccgatgagatccgggaggagtttccgtgtggaaaagaggctcctgctcga
acgtgccctaatggaactgaatgtaaactgtactggattggacctaactatggaattacc
cagtttgacaacatcctgtttgccgtgctcacagtcttccagtgcatcaccatggagggc
tggactgacctgttatactatagcaatgatgcttcagggagtgcatggaactggatgtac
ttcatccccctcatcatcatcggctccttcttcatgctcaatcttgtgctgggtgtgctg
tcaggagagtttgctaaagaaagggaacgtgtggagaacaggagagagtttcttaagctg
aagcgtcagcagcagatagagagagagctgaacggatatctggagtggatctgcaaagca
gaagaggtgattttggctgacgaggacaatgacccagatgaccggataccctttgacggc
tcgcggaggaggcctaccatcaagaagaataaaacagacctgcttgatgcagaggataga
gatggagatataggttctccatttgcacggggcagtctgaagagctcaaagctggagggc
tcttccttccataaaaaagagcgtcgactgcgatttttcatcaggcacatagtgaagact
caagcattttactggagcgtgctgtgtctggtgggactcaacacactgtgtgtggctgct
gtgcactacgaccagcccgaaacgctctccgacttcctctactttgctgagttcatcttc
ctggggatctttatgtcagagatgtgtattaagatgtatgggctggggaccagtccttat
tttcactcctccttcaactgttttgactgcattgtcatttgtggcagcattttcgaggtg
ctctgggctataatccagccaggaacctcgtttgggatcagtgtgttacgagctcttagg
ttactgaggattttcaaagtgaccaagtactgggcgtctctgaggaacctggtggtgtct
ttgcttaactcaatgaagtccattatcagtttactcttcctccttttcctcttcatcgtg
gtctttgcattgctgggcatgcagctgtttggaggacagtttaattttgaagccggcaca
ccacctacaaactttgatacttttcctgcagcaataatgacagtgtttcaggtcctgacg
ggtgaagactggaacatggtcatgtatgatgggatcgagtctcagggcggagtcaggaag
ggcatggtcttctcagtcttcttcatcgttcttacgctcttcggcaactacactctgctc
aatgtgttcttggctatcgctgtggacaatctggccaatgcacaagagctgaccaaggat
gaacaggaggaagagcaggcagccaataagaaaatggctcttcaggcagccaaggaagta
gcagaggtcagcccactgtctgcagccaacctctccattgctgccgtgacagtaagctct
gagcgtcttgatgcaacagaacactttctggactgtatggagcaacagaagaaccacata
gggtgtaagtcggtatgggagcagcgcactactcagctgagaagacagaccctggtgaac
agcagagaggtgctttacaatgagttggaccctgaagaccgctggaaggtcgcgtactcc
cgtcatattcgtcctgatatgaagactcacctggaccggccgttggtcgtggaccctcag
gagaaccgcaataacaataccaacaaaacccgtccaggtgacggccagccccggcgcact
catcagctcctgcacaaacagcccagcttcaatgaaggggagagtggaggatctgggccc
tggacagcattggagaggggcgactccactggatctcgtcggagtcttttaggctctgag
aaccatggggagggtagagagtgtcatcgtagacatcagcatagcgagcgctgcagccag
gcccgccaacatcgtaaagccgcagaggatgagggagagggagagggcggagggaggaga
cacaggagtaagggcagggaaagaggacctgaaacgcaagagcggaaacataagcatcat
cgccatgagggcgaaggaagaaaagagagaggggtccgtcaccgtacaaggaaggatggt
catggaagtggtctcactctctccaccacccgtcccattcagaagactctgtccaggcag
gacagtcagtacagtgaggacctggacaatgccatgaacaacaagctcgccacccagcca
cctaggaactccacccctcatgatagtctgctcaatctggccaacagtgcccatactgcc
ggcctgacacacactggcactgagagcaacctcattcccaccaacccttcttcgacccct
gctaatgttaccagcactggtcacctgggcatgaaccctgactacactgccgtggacatc
cccccgatgttcccctccagtaacgccgtcttacaggtcaataggaatgcaaacactgag
cccctgcccaagaaggaggacacaaaggctgatgatgatgatgatgagaaagatgatggg
gggcctaaacccatgccaccctacacctcaatgttcattctgactaccaccaacccattc
cggaggctgtgccactatatcgtcacgctccgatattttgagatgtgtattctgctggtc
attgcaatgagcagtatttccctggccgctgaagaccctgtctggcccgaatctccccgc
aacaatgtcctgcggtactttgactatgtgttcacgggtgtgttcacctttgagatgctc
attaagatggtagatttaggtcttgtcctgcatcaaggctcatatttccgtgacttgtgg
aacatcctggactttatagtggttagtggtgccctggtggcgttcgccttcacaggaagc
agcaaggggaaagacatcagtactatcaagtccctgcgtgtgctcagagtacttcggcct
ctgaaaaccatcaagcgtctgccaaagctgaaggctgtctttgactgtgtggtgaactct
ctgaagaatgtgttgaacatcctcattgtctacatgctgttcatgttcatctttgctgtg
gtggctgtgcagctcttcaaaggccgtttcttttactgtaccgatgaatccaaagagctt
gagcgtgactgcaggggcgagtatcttgtctatgaaagagataatgaagtgcgggcgcag
aagcgggaatggaagaaatacgatttccactacgacaatgtgctctgggcccttctcacc
ctcttcaccgtttctactggagaggggtggccacaggtgctgaaacattcagtggatgcg
acctacgagaatcagggcccgagtccaggttaccggatggaaatgtccattttttacgtg
gtgtacttcgtggtcttccctttcttcttcgtcaacatcttcgtggctcttatcatcatt
actttccaggagcaaggagacaaaatgatggaggattatagcctggaaaagaatgagaga
gcctgcatagacttcgccatcaatgctaaaccgctcacgcgccacatgcctcagaacaaa
caaacgttccagtaccgcatgtgggagtttgtggtgtctcctccgtttgaatacaccatc
atggctttgatcgccctcaacaccattgtccttatgatgaagtatgatggagcatcagat
acctatgaagctgtgttagccaacctgaacatggtgttcacctcacttttctccatggag
tgcatattgaagatcattgccttcggagtgctgaactacttcaaagacgcctggaacatc
ttcgactgtgtgactgtacttggcagcatcactgatattttagtcacagagctagggaac
aacttcataaatctgagttttctaaggctcttcagagctgctcgtctcattaagttgctc
aggcagggtgagaccatacgcatcctgctctggaccttcgttcagtctttcaaggctctg
ccgtatgtgtgcttactcatcgccatgctgttcttcatctacgccatcattggcatgcag
ctgtttgggaacattgcgattgaggaggatggtgagagcgccataaaccagcacaacaac
ttcaggacttttttccaggccctaatgctgctcttcaggagtgctacaggtgaggcatgg
catgaaatcatgctgtcatgtctgggaaagaagcagtgtgattctcacttcggtaacgtg
gagccagaatgtgggagcgagtttgcctatctctactttgtctccttcatcttcctctgt
tcctttctgatgctgaatctgttcgtggctgtgatcatggataatttcgagtacctgaca
cgtgactcctctatcctgggaccccatcacctggacgagtatgtgagaatctgggcagag
tatgatccagctgcttgcgggcgcattcattataaggatatgtacagtttattgcgagtt
atcgacccccctctgggcttaggcaagaaatgtcctcatagggtggcctgcaagagactg
ttgaggatggacctgccagttgccgatgacaacacagtgcactttaattccacccttatg
gccttaatccgaactgctctggacatcaagatcgccaagggtggggaaggaggtgtagat
aagcaccagatggatgctgaactaaggaaggagatgatggcgatatggcccaatctatct
cagaagaatctggaccttctggtgacaccccacaagtcagcgacagacttgacagtggga
aagatttatgctgccatgatgatcatggagtactatcggcaaagtaaagccaaacggaca
caggctatccacgatgaacagaatcgaacgccattaatgtttcagcgtctggagccacca
tctccaagccaggatgtgggacagggactcactggccttcctgaaacacaacaacaacct
gtaaatcatctgcctgttgatgacaggatcccggagagccaatcatgggtgacggcacga
gcccaagagatgtctcagaaagcaggaagctggagtcctgaaggccaaaacccagacaac
actgcagataactgcagacaatctcagacagtagagatgagagagatggggcaggacgag
tactcggacactgagcactatctgccgatggaaggccatggcagggctgcttccatgcct
cgactcccagcagacaaccaacagactatcactgataacagtctgatgaagcgttcagtt
tcatctttggggcatgggcgtcaaggccgctcagtgcggggtgaggactatgccatggac
agggttatcccagaagagggacacagacatgggcatcgccaccgagaccgcaatcaccgt
gcgtctgagcgttccctgagccgctacactgatgctgacacagcaggtcttggcactgac
ctcagcaccaccacacagtcgggagacctgccatccacggagagggaccggggccgggcc
aaagaccgcaagcaccaccatcatcaccatcaccacaacggttctctagataaggagcac
tatggacatgagcgagaacgaggggactatggccacagacagtctagagagagagaccgc
cgctggtcccgctcaccgagtgagggcagagagtgcctgacacacagacagggcagtagt
tcagtaagtggcagtccagtcccctccacctctgggaccagcacgccccgccgcggccgg
cgtcagctaccccaaacccccgctacaccccgaccccacgtcacctactctcccgtggtc
cgtaagcccattggtggcactccccctccgggccaacaaaaccgactcccagctccgact
tcccgtcggtttagcccgcccggtccagagcccccgcttccccctcaccaccatccatcg
cccccaaaccatggctctcctcactcctcccgtcatgcgcactggggccccagccctgcg
gagagtgtggagggtgacggtttctacgatgaccaagactatgagttcaatcaccacaag
cctccatcctatgaacaaagccctgtgcagggtaaccctcacccacattcccccaggact
tcacgccacagcaccccgcctcatggccagccaaatccgcggcgcatgccaaacggatac
cgttcatcatcgccccctccccaccaccacacccccaaccaccagggaactcataagcct
cctcatcccagagggcccaggaagggcctccatgaaccctacagtgagactgatgaggat
gactggtgctag
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integrated database retrieval system
