KEGG   Carassius gibelio (silver crucian carp): 127957554
Entry
127957554         CDS       T08819                                 
Name
(RefSeq) bromodomain and WD repeat-containing protein 3 isoform X1
  KO
K11798  bromodomain and WD repeat domain containing protein 1/3
Organism
cgib  Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:cgib04121]
    127957554
Ubiquitin system [BR:cgib04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     127957554
SSDB
Motif
Pfam: WD40 WD40_Prp19 Bromodomain WD40_WDHD1_1st WD40_CDC20-Fz EIF3I Beta-prop_EML_2 Beta-prop_EML Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd WDR55 Beta-prop_WDR75_1st Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_EIPR1 Beta-prop_TEP1_C Beta-prop_SCAP Beta-prop_DCAF12 WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd WDR90_beta-prop_4th ANAPC4_WD40 Beta-prop_SPT8 NBCH_WD40 Beta-prop_IFT140_1st Beta-prop_DCAF4 Beta-prop_IFT122_1st
Other DBs
NCBI-GeneID: 127957554
NCBI-ProteinID: XP_052412107
LinkDB
Position
B5:complement(38832722..38857865)
AA seq 1759 aa
MAAEPCSQIEAELYYLIARFLQSGPCKKSAQMLLQELHEYDIIPKRWSWEGKQFKRSFED
WVLLNQHIPADYLLRVCEQISPLIDKHIPPSVPGVHSLLGSGRQSLLRTAQSSSHTVWSG
SAVVALHRGRPPEPPLNCAKPPNIVSIMGARQKTGVARFGHVVPSCTYQHMKMHRRILGH
LSSVYCVAFDRTGQRIFTGSDDCLVKIWATDDGRLLATLRGHAAEISDMTVNFENTLLAS
ASCDKVIRVWCLRTCAPVAVLQGHTASITSVQFSPSALGSSRHLATTGADGMVCFWQWNS
LSMKFNDRPVKFMERSRPGVQISCSSFSSGGLFLATGGTDHMIRVYYLGTEMPVKFSDLD
SHTDKVVAIQFCNNTDSLRFVSGSRDGTARIWHYQQQEWKSTVLDMTTRLPGSAVISGDD
KSTKLVVTMVAWDRYDRSIITAVSNCLLKVWNSANGQLLHVLSGHDDEVFVLEAHPFDSR
ILLSAGHDGNIYIWDLSKGLKIRNFFNMIEGQGHGAVFDCKFSVDGQHFACTDSHGHLLI
FGFGCSQPYEKIPDQMFFHTDFRPLIRDSNNFVLDEQTQQAPHLMPPPFLVDVDGNPHPP
RSQRLVPGRENCKEEQLVPQLGYMANGDGEVVEQVIGQQTADESQEESPLDDLIRQLQHQ
QDEQLNSGNPTGAEVAGGPLSPPNVGLRRSGQVEGVRQMHNNAPRSQIATERDLLAWSRR
VVVNEVQPGIFRVMEDSRRAKGELERSFYNIEKKKKSAPAPGSEPVGESGRVLRRPQRRP
QQRRHTYQTRSTQERRRSTSVLSYNHNEESVAESDSEVEQQEEEQNENSDVSSDGEAQWE
NDSSSSDSSSEYSDWTADAGINLQPPKRTSRRLPARVAVSSSSEDEEGTGQGLGEGEAER
TSKRTAKKKKPKQRSVPAGDLEEWLPPSWIMETIPRRSPFVPQMGDELIYFRQGHQAYVR
AVCRAKAYSINPQKQPWNRLNLRDQESVKVVGIKYEVGPPTLCCLKLALLDPTSGKMTNE
SFSLKYHDMPDVIDFLVLQQFYNEAKERNWQPGQHFRSIIDDAWWFGSVECQEPFQSDYP
DSLFQCYIVRWDNGEREKMSPWDIEPIPEEAPLPEEHGGSVPVTEDELQALLYTPQEGEW
GLHTRDDECERVITAIDQLLTLDVAKAFSRPVDLREYPLYCTVVSYLTDLSTIRTRLVHR
FYRRISALMWEVRYIEHNARTFNEPQSPIVKAAKTVSSVLLRFIRDQTCTDILDLYEKMK
SEFSSEEEEEETVDVDSDTPGTSTGQRRSNNLPQKRGVVLDISAWHGQCKELLRRMMASS
DSEPFRQPVDLFTYPDYRDIIDTPMDLGTVSETLMGGNYENPMEFAKDVRLIFSNSKAYT
PNKKSRIFSMTLSLSAFFENQIIPIISDYKSAVQNQRRSQQRLSCSKKLQSSCPNSPKGK
QKSGKKTSQVSAKGRSRKSSQDLNVAQVDEESQASSSSSSSSSSSSLSSSSEQAGANRVT
RSRVAPKKFSGGHGLLPNGGRSSRRRGAVLPEEGEVSECESTSSSSSSTSASSSSSGTSS
SSSESDDSGAEVGGFADGGDHDYSKAPQHKDKGKAAVAAVSVDNTKRKRKEEVQTTPVKR
ARLANERDEEPDEEPDEEPEEEPEEEPEEEPEEEPEEEPEEEEEEPEEEIDEEEEESEEE
EDDVISSSTKTGSQRSNQRTPKSGRVNTRNQGRRTVLYNDDSEDEGPTTDPLNLGMSRSG
RVRRMTERARVSHLMGWTH
NT seq 5280 nt   +upstreamnt  +downstreamnt
atggcggcggaaccgtgctcgcagattgaagccgaactttattacctgatcgccagattc
ctgcagtctggaccatgtaagaaatccgctcagatgctgctgcaggagctgcacgaatac
gatatcatcccgaagcgctggagctgggaaggaaagcagtttaagcgaagctttgaagac
tgggtcttgttaaatcagcacatacctgcggattacctgttgcgcgtgtgtgagcagatt
tccccattgatagataaacacattcctcctagtgttcctggagtccacagtttactgggc
agcgggcgacagtcattactacggacagcacaaagttcttctcatacagtatggagtggt
tctgcagtagttgctttgcacaggggacggcccccagaaccacctctcaactgtgccaaa
ccaccaaatatagtgtcaatcatgggtgctcgccaaaaaacaggagtggctcgatttggc
catgtcgtcccctcctgtacctatcaacacatgaagatgcatcgaaggattctgggccat
ctctcatcagtgtactgtgtggcatttgaccgcactgggcagcgcatttttacgggttct
gatgactgtctagtgaagatctgggcgacggatgatggccgtcttctagccactctgcgt
ggacatgcagcagagatttcagacatgactgtgaatttcgagaacacgctccttgcttcc
gccagctgtgacaaggtcatccgcgtgtggtgcctgcgtacctgtgcacctgtggcagtg
ttgcaggggcacacagcctctatcacctccgtacagttttctccttcagcattaggttcc
tctcggcatctggccaccactggcgctgacgggatggtgtgtttctggcagtggaactca
ctcagtatgaagtttaatgatcggcctgtgaagtttatggaacgttctcgtccaggagtt
cagatatcctgcagttccttcagctctgggggattgtttctggccaccggagggacagat
cacatgatcagagtttactacctcggcacagagatgcctgtaaagttttctgacctggac
tcccacacggataaagttgtagctattcagttctgcaataatacagacagtctcaggttt
gtgagtggtagtcgggatggtacggctcggatttggcattaccaacagcaggaatggaag
agtaccgtgctggacatgaccaccagattaccagggagtgctgtgatatcaggcgatgac
aaatcgaccaagttggtggtgaccatggtcgcgtgggatcgttacgatcgctccatcatc
acagctgtttcaaactgcctcctcaaagtctggaattcagcaaatggccaattactacat
gtgctgtcgggtcatgatgatgaggtgtttgttttggaagcacacccgtttgactcacga
atcttgttatctgctggtcatgatggtaacatctacatctgggacctcagtaaaggcctc
aagatcagaaacttcttcaatatgatcgaaggccagggtcatggtgctgtgtttgactgt
aaattttctgtggatgggcagcactttgcctgcactgactctcatggtcatctgctcatc
ttcggatttgggtgcagtcagccttacgaaaagattccagaccaaatgttcttccatacg
gatttccggccgctgatccgggactccaataactttgttctagatgagcagacgcagcag
gcaccccatcttatgcctccaccttttctggtggacgtagatgggaacccccaccctcct
cgttcccagcgcctggtgccaggcagagaaaactgcaaagaggagcagcttgtgccacag
ctcggctacatggctaacggtgatggtgaagtggttgagcaggtgattggccagcagact
gcagacgagtctcaggaagaaagcccattggatgacctgattaggcagctccagcaccag
caagatgagcagctcaactcaggaaatcctacaggtgctgaggtggcaggtggtcctctg
tcaccccctaacgttgggctgcgacgtagcggacaagttgagggtgtacggcagatgcac
aataatgccccccgcagtcagattgccaccgagagagacctgctggcgtggagccgccgc
gtggtggttaatgaagtccagcctggcatattcagagtgatggaagacagtaggcgtgct
aaaggagagttagaaaggtctttctacaacattgagaagaagaagaaatctgcacctgca
ccaggaagtgagccggtgggagagagtggtcgcgtgttacggaggcctcagcgcagacct
cagcaaaggagacacacgtatcagactcgctcgactcaagaaagaagacgcagcacaagt
gtgctctcatacaaccacaacgaggaaagtgtggcagagtccgacagtgaagtggagcag
caggaggaggagcagaatgaaaacagtgatgtgtcctctgatggtgaagctcagtgggag
aatgacagtagctccagtgactcctctagcgagtattctgattggacggcggatgcagga
atcaacctccagcctccaaagcgaacaagtagaaggctgccggctcgtgttgctgtgagc
agtagctctgaggacgaggaggggacggggcaggggctgggagaaggagaggctgagaga
accagtaaacgcactgcaaagaaaaagaaacctaaacagcggtctgtgcctgctggcgat
ttagaggaatggttgcccccatcttggatcatggagaccattccaagacgatcacccttt
gtaccccaaatgggagatgagctgatatatttccgtcagggtcatcaagcatatgtccga
gccgtgtgtcgtgccaaagcctacagcatcaaccctcagaaacagccctggaaccgcctg
aacctcagggatcaggagtctgtaaaggtagtgggtattaaatatgaagtcgggccgccc
actctgtgctgcctcaaactggctctcctggatcccacctcagggaaaatgaccaacgaa
tccttcagcttgaagtatcatgatatgcctgacgtcattgactttctggtgctacaacag
ttttataatgaggccaaagaacgcaactggcagcctggtcagcatttcaggagcatcatt
gatgatgcttggtggtttggttcggtggagtgtcaggagccatttcagtctgactatcca
gacagcctctttcagtgctacattgtcagatgggataatggagagagagagaaaatgagt
ccatgggatatagagcccatacctgaagaagctccacttccagaggaacatggaggcagt
gtcccggtcacagaggacgagctgcaggccctgctgtacactcctcaggagggagagtgg
ggactgcacacacgagatgacgagtgcgagagagtcatcacagccattgatcagctgcta
acgctcgatgtggcaaaggcattctcccgccctgtagatttgagggaatatccactgtac
tgcactgttgtgtcctatcttactgaccttagcaccatcagaacaagattagttcaccgt
ttctacaggcggatctcagcactaatgtgggaggtgcgttacattgaacacaacgctcga
acatttaacgaaccgcagagccctatcgtcaaagcagccaaaacggtcagcagcgtcctg
ctgcgtttcatcagggatcagacctgtactgatatcttggatctctacgaaaagatgaag
agcgaattcagcagcgaggaagaggaagaggagactgtggatgtggactcggacactcct
ggcacctccactggtcagaggaggtctaataatttgcctcagaagcgtggagtggtcctg
gatatcagcgcgtggcacggacagtgcaaagagcttctgaggagaatgatggcaagctct
gattccgagccctttcgccagcctgtcgacctcttcacctacccggattatcgtgatatt
atagacactcctatggatttaggcacagtctctgaaaccctgatgggtgggaactacgag
aatcccatggagtttgccaaagatgtgcggcttatcttcagtaattcaaaggcttacacg
cccaacaagaagtcacgaatcttcagtatgactctgagtctctcagcgttctttgagaat
cagatcattcccataatctcagactacaaatctgcagttcagaatcaacgtaggagtcaa
cagagacttagttgcagcaagaaattacagagctcctgtcccaacagccccaaagggaaa
cagaaatcaggaaagaaaacttcccaggtgtctgcaaaaggccgctcacgcaaatcctct
caagatttgaatgttgcacaagtcgatgaagagagtcaggcatcctcttcatcctcatcc
tcttcctcctcctcttccttgtcctcttcatcagagcaggcaggagccaacagagttaca
cgcagccgtgttgcaccaaaaaaattctcaggtggccatggcttactgcccaatggaggt
cgaagctcacgtcggagaggggccgtgttacctgaagagggagaggtctctgaatgtgag
agcaccagctcatcgtcatcctcaacatctgcatcatcatcctcttccggaacctcatcg
tcttcgtccgagagtgacgacagcggggctgaggtgggcggctttgccgatggcggtgat
catgactacagcaaagcaccccaacacaaagacaaaggcaaagcggcagtggcagcggtg
tccgttgataacacaaagagaaagcgcaaagaagaagtgcaaacaactcctgtgaaacga
gcacggctagcaaatgaaagagatgaggagcccgatgaggagcccgatgaggagcccgag
gaggagcccgaggaggagcccgaggaggaacccgaggaggaacccgaggaggaacctgag
gaggaagaggaggaacccgaggaggagattgatgaggaagaggaggagtcggaggaggag
gaagatgatgtaatttcatcatcaacaaaaactggaagtcagaggtcaaatcaaaggact
ccaaagtcagggcgggttaacactcgtaaccagggtcgaaggaccgttctgtacaacgat
gactctgaggacgaggggccgacgacagacccgctgaatctaggaatgtcacgttctgga
agggtccgtcgcatgactgaacgtgcaagggtcagccatcttatgggctggacacattga

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