Carassius gibelio (silver crucian carp): 127959605
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Entry
127959605 CDS
T08819
Name
(RefSeq) neuronal PAS domain-containing protein 4-like isoform X1
KO
K26457
neuronal PAS domain-containing protein 4
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgib03000
]
127959605
Transcription factors [BR:
cgib03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
127959605
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GFIT
Motif
Pfam:
bHLH_NPAS4
PAS_11
PAS_3
PAS
PAS_4
PAS_2
HLH
Motif
Other DBs
NCBI-GeneID:
127959605
NCBI-ProteinID:
XP_052414842
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Position
B6:complement(193716..197741)
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AA seq
573 aa
AA seq
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MDFLCFFRSERMSVGCDTSVRRILRASQRFRSTKGASKARRDHINGEIRNMRSLLPISAE
DQERLSYLHSMSLICTYVRKTVLLKAGVQQRADGASPLYESFLQALPGFIVALTRDGKLV
YVSENVPEYLGLSMVDVLQGDTFYDMMDSRDAEAVEVILREQAVSAERSFVCRMHTSKAF
RLQYGSCCSMLVRGRFQAGPPDAALFVALCTPTVDRLKDSELLRSSACFQTLHRPDMRLT
HAPYSVLFHLGFSAEELIGRSWYDLLHPDDLTLAAGCHRTLTGAEGDADGEMLVRLLCKD
LSWIWLYVCVTVDRARELISCTNHVLSEAEALYLKDKLYGGVSSQRPVLSAPRPREREAV
RRSSETSDCSGGTDADLRSGSLAFSTPPYSPTSSHSSDFLSDGYSGFEQLADGFCPSQAF
CDPSCGVPPVCLPDAHLVPIYHPTLDVCEAAADCVLHPEDFSVFPLPHEGDLLTPEASPT
ADGHFLYSETERAEIGTLAHQIRSLASSFDAYSTTRHLQPDSAPCWPPAPEPLLDETVID
SILRDLVSAKEPDCVWSRSAAGAFSACVYEHQR
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atggacttcttgtgtttcttcagatctgagaggatgagcgtcggctgcgacacgagcgtc
aggcggattctccgcgcgtcacaacgcttcaggtccactaaaggggcatccaaagcccgg
cgagaccacatcaatggagagatccggaacatgcggtcactgctgcccatctcggctgaa
gaccaggagcgtctgtcctacctgcactccatgtctctcatctgcacctacgtcaggaag
acggtgctcctcaaagcaggtgttcagcagcgcgcggatggagcttctcctctgtacgag
agcttcctgcaagccctgcctggatttattgtggctttgaccagagacgggaaactggtc
tatgtgtctgaaaatgtgccagaatatctgggcctgtcgatggtggatgtccttcaggga
gacactttctatgatatgatggacagtcgtgatgctgaagcggtggaagttattttgaga
gagcaggccgtctccgctgagcgcagcttcgtgtgccgcatgcacacctccaaagcgttt
cggctccagtacggcagctgctgctccatgctggtgagggggcgattccaggccggcccg
ccggacgccgctctgtttgtggccctctgtacgcccacagtggacagactgaaggacagc
gagctcctgagatcctccgcctgcttccagacgctccacagaccggacatgaggctcact
cacgccccctacagtgtcttgttccacctgggtttctcagcagaggagctgattggtcga
tcatggtacgatctcctgcatcctgatgacctcacgctcgccgccggctgccaccgcaca
ctcactggagccgagggcgatgcggacggagagatgctggtccgactgctgtgtaaggat
ctgtcctggatctggctctatgtgtgtgtgactgtggaccgagccagagaactgatctcc
tgcaccaatcacgtgctcagtgaagcggaggcgttgtatctgaaagacaaactctacggc
ggtgtgtcgtctcagcgtcccgtcctgtccgctccgagaccgagggagcgtgaggcggtc
aggaggagctcagagaccagcgactgctccggcggcacagacgcggatctcaggagcggc
tcgctcgccttctccaccccgccctacagccccacttcctcccactcctctgacttcctg
tctgacggctacagtgggttcgagcagctggcggatgggttctgcccgtctcaggcgttc
tgtgacccgtcctgcggcgttcctcccgtctgtctgcccgacgctcacctcgtcccgatc
taccatcccacgctggacgtgtgtgaggctgccgcagactgtgttctgcatccggaggac
ttcagcgtgtttcctcttcctcatgagggcgatctgctgacgcccgaggcctcgcccacc
gctgacggacacttcctctacagcgagacggagcgggctgagatcgggactctggcccat
cagatccgctctctggccagcagcttcgacgcctacagcaccacacgccacctgcagcct
gacagcgccccctgctggccgccggcgcccgagcccctgctggacgagaccgtcatcgac
agcatcctgagagacctggtctcagccaaagagccggactgtgtctggagccggagcgca
gccggagcgttctcagcgtgtgtgtacgagcaccagcgctga
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