Carassius gibelio (silver crucian carp): 127959967
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Entry
127959967 CDS
T08819
Name
(RefSeq) sodium channel protein type 2 subunit alpha-like isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cgib04040
]
127959967
Ion channels [BR:
cgib04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
127959967
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
GPHH
IQ
FUT8_N_cat
Motif
Other DBs
NCBI-GeneID:
127959967
NCBI-ProteinID:
XP_052415432
LinkDB
All DBs
Position
B6:23832900..23869414
Genome browser
AA seq
1993 aa
AA seq
DB search
MAAQLLVPPGPDSFRPFLPESLAAIESRIAEEAAKRPKGERRPDDDDENGPKPNSDLEAG
KSLPFIYGDLPSEFVSVPLEDLDTYYSNQKTFIVLNRGKAIFRFNATPALYILSPFNPLR
RISIKVLVHSMFSFVIMCTILTNCAFMTLSNPPDWAKNVEYTFTGIYTFESLIKILARGF
CVGKFTFLRDPWNWLDFSVIMMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVG
ALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRQKCVKIPDFNFTENLTATLNYSTA
INWTEYISDESNYYFLPGRRDPLLCGNSSDAGQCPEGFSCIKAGRNPDYGYTSFDTFSWA
FLSLFRLMTQDFWENLYQQTLRAAGKPYMIFFVLVIFLGSFYLVNLILAVVAMAYDEQNQ
ATIEEAQQKEEEFQAMLEQLKRQQEEAQVAAAAATESGEYSERGGLSEESSSGGSRLSSK
SAKERRNRRKKRKQREEEEKANQEKFHKSASEDSIRRPGFRFSIDANRLSYEKKCSTPNQ
SLLSIRGSLFSPRRNSRASLFSFRGRARDFGSENDFADDEHSTFEDSDSRRGSLFVPRCV
ERRSSTVSHCSLAPRIMLPANGKMHCTVDCNGVVSLVGGTSVPTSPIGRLLPEGTTTESE
ARKKRSGSHQPSDYLDETVARKRALSVASILTNTMEELEESRQKCPPCWYKFANSFLIWD
CCPAWLKVKEIMNMVVMDPFVDLAITICIVLNTLFMAMEHYPMTERFNHVLSVGNLVFTG
IFTAEMCLKLIALDPYYYFQEGWNIFDGIIVSLSLMELGLANVEGLSVLRSFRLLRVFKL
AKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYRECVCKISADCVL
PRWHMDDFFHSFLIVFRVLCGEWIETMWDCMEVAGQTMCLIVFMMVMVIGNLVVLNLFLA
LLLSSFSADNLAATDDDSEMNNLQIAVGRIQKGIALVKSTLRQFLQSLCLAVSKPRALDE
EKPLDDLHSNGKENCLSNHAPVAVDLTKDYLKEGCVSPGNGVEGHVKYGIEEGDYMSFIH
NPSLTVTVPIAVGESDFENLNTEDFSSDSSDVEGSKEKLNVEAVHSSSEGSTVDIRPPGE
GAESVELEPEESLDPEACFTEGCVIRFQCCKVDVETGKGKSWWILRKTCFIIVEHNWFES
FIIFMILLSSGALAFEDIYIEQRKTIKTVLEYADKVFTYVFILEMLLKWVAYGFVKYFTN
AWCWLDFLIVDVSLVSLVANALGYSELTAIKSLRTLRALRPLRALSRFEGMRVVVNALLG
AIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYYHCVNITNDEMFPISVVNNRSDCFALIAN
NDSARWKNVKINFDNVGAGYLALLQVATFKGWMDIMYAAVDSRDLEQQPDYESNLYMYLY
FVIFIIFGSFFTLNLFIGVIIDNFNQQKKKIRGQDIFMTEEQKKYYNAMKKLGSKKPQKP
IPRPANVFQGLIFDFITKQAFDIVIMILICLNMVTMMVETDDQTKDMDNILYWINLVFII
LFTGECVLKMISLRHYYFTVGWNVFDFVVVILSIVGMFLSDMIEKYFVSPTLFRVIRLAR
IGRILRLIKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAYVKHEAGID
DMFNFETFGNSMLCLFQITTSAGWDGLLAPILNKQDPDCDSELEHPGSMYRGDCGNPSVG
IFFFVSYIIICFLIVVNMYIAVILENFSVATEESAEPLSEDDFEMFYEVWERFDPDATQF
VEYEKLSEFADALDPPLRIPKPNKIQLIAMDLPMVSGDRIHCLDILFAFTLRVLGEEGEM
DALRGQMEDRFMASNPSKVSYEPITTTLRRKQEEMSAIVIQRAFRRYRIRQTVKKASEAY
RQQLQDGSGCIPEKEVLVIEKFQENSASEKTDMTPSSASPPSYNSVAKSEKDKYEKERRE
KEYKAKDARDRKK
NT seq
5982 nt
NT seq
+upstream
nt +downstream
nt
atggctgctcagctgctcgttccacccggacctgacagcttccggcccttcttgcccgag
tctctcgctgctatcgagagccgcatcgcagaggaggcggcaaaacggcccaaaggcgag
agacggcctgatgatgatgatgaaaacgggcccaaacccaacagcgatttggaagcagga
aaatccctgccctttatctacggagaccttccatccgaatttgtgtccgtcccgctggag
gacctggacacctactacagcaaccaaaaaacctttatagtattgaatcgtgggaaggct
atattccgctttaatgctacaccggctttgtatattttgagccccttcaatccactgagg
agaatctccatcaaggtcctggtgcattcaatgttcagttttgtgatcatgtgcacaatc
ttgaccaactgcgccttcatgaccctcagcaatccccctgactgggccaagaatgtggag
tacacgttcacagggatctacaccttcgagtccctgattaagatcctggcaaggggcttc
tgtgtggggaagttcactttcctgcgagacccctggaactggctggactttagtgtcatt
atgatggcatatgtaacagaatttgtggatctgggcaatgtctcagcactgagaaccttc
agggttttacgagcactcaaaactatatcagtgattccagggctgaagactatcgttggc
gccctgatccagtcggtgaagaagctgtcagatgtgatgatcctgactgtgttctgtctg
agtgtgtttgctctgatcggactgcagctcttcatgggaaacctgcggcagaagtgtgtg
aagattccagacttcaatttcactgaaaacctgactgccacgctgaactacagcaccgcc
attaactggacagagtacattagtgatgagagcaattattatttcctcccaggccgcaga
gaccctttgttatgtggaaattcaagtgatgcagggcagtgtccagagggcttttcgtgt
ataaaagcaggtcgtaatcctgactacggctacacaagctttgacacattcagctgggcc
ttcctctcactcttcagactcatgacacaagacttctgggaaaacctctaccaacagacc
ctgcgtgcagctggaaagccctatatgatcttctttgttcttgtgattttcctgggctcc
ttctatctggtcaatctcatccttgccgtggtggccatggcatatgatgagcagaaccaa
gctaccatagaagaggctcaacagaaagaggaagagtttcaagccatgctagagcagcta
aagagacagcaggaagaggcacaggttgcggcggcagcagcaacagagagtggggagtac
agcgagagggggggcttgtctgaggaaagctcctccggggggtccagactcagctccaag
agtgctaaagagcgaaggaacaggaggaagaaaagaaaacaaagggaagaagaagaaaaa
gccaatcaggaaaagttccataagtccgcttcagaggacagcattagacggcctggattt
cgattctccatcgatgccaaccgactctcgtatgagaagaagtgttcaactcctaatcag
tctcttctcagtattcgtggatctctcttctccccaaggaggaacagtcgcgcgagtctg
ttcagttttcgcggtagagcgcgagactttggctcagagaatgattttgctgatgatgag
cacagcacgtttgaggatagcgacagccgccgcggatcgcttttcgtacctcgttgtgtt
gagagacgaagttccactgtcagtcactgcagcctcgctcccagaattatgcttccagcc
aacgggaaaatgcactgcacagtcgattgcaatggagtggtctccctggtgggtgggacg
tctgtgccaacatcaccaattggacgtttgttacctgagggcacgaccactgagtctgag
gcacgcaaaaaacgttcaggatcacaccagccatctgattatctggatgagacagtagcc
agaaaaagagctctcagtgtggccagcattttgacaaacactatggaagagcttgaggaa
tcgcggcagaagtgccctccatgctggtacaagtttgccaacagcttcctgatctgggac
tgctgtccagcctggttgaaggtgaaggagattatgaacatggtggtgatggacccgttt
gtagacctggccataaccatctgcattgttctcaacacactcttcatggctatggagcac
taccctatgacagaaaggttcaaccatgtgctgtcagttgggaacctggtattcacaggg
atcttcacagcagaaatgtgtctgaagttaattgctctagacccatattactatttccaa
gaaggctggaatatctttgacggcatcatcgtgagcctgagtctcatggaactgggcctg
gccaatgttgagggactttctgtgttgcggtcctttagattgttaagagtctttaagctg
gcaaagtcttggcccaccctgaacatgctgataaagatcattggtaactcagttggtgct
ttgggaaatctaaccctcgtccttgccatcatcgtcttcatcttcgctgtggtgggaatg
cagctgtttggaaagagctaccgtgagtgtgtctgcaagatctcagctgactgtgtgttg
ccgcggtggcacatggacgatttcttccactccttcctgattgtgttccgagtgctttgc
ggtgaatggatcgaaaccatgtgggactgcatggaagtggcggggcagacaatgtgtctc
atcgtcttcatgatggtcatggtcattgggaatctggtggttttgaacctgttcctggcc
ttgctgttgagctctttcagtgccgataacctggccgccacggatgatgacagcgaaatg
aacaacctgcagatcgccgtgggcagaatacagaaaggtatcgcactggtcaagtccact
ttacgccagttcctccaaagtctctgcctggccgtctctaaacctcgtgctctagacgaa
gagaaaccccttgacgacctccacagcaacggcaaggagaactgcttgtccaatcatgct
ccggtggccgtcgacctcactaaagactatctgaaggagggctgtgtctcccctggtaat
ggagtggaaggtcatgtaaagtatggaatcgaggaaggcgactacatgtcgttcatacac
aatcccagcctcactgttacagtaccgattgcggtgggagagtcggactttgaaaatctg
aatacggaagatttcagtagtgactcgtctgacgtcgagggcagtaaagagaagctgaat
gttgaggccgttcacagttcctcagaagggagcacagtggatatccgaccccctggagaa
ggggcggagtctgtggagctggagccggaagagtccctggacccagaggcctgcttcaca
gaaggctgtgtgattaggtttcagtgctgtaaggtcgatgtggagacgggaaaagggaag
agttggtggattctcaggaaaacctgcttcattattgtagagcacaactggtttgagtcc
tttatcatctttatgatattactcagcagtggagcattggcttttgaggacatttacatc
gagcaacgtaagacgataaagacagtgttggaatacgcagataaagtcttcacatacgtc
tttattttggagatgcttctgaagtgggttgcttatggcttcgtcaaatacttcaccaac
gcctggtgttggcttgacttcctgattgttgatgtgtcattagtgagtctggtagcaaat
gctcttggttactctgaactaacagccattaagtctctgagaacactgcgtgctcttaga
cctttgagagcattgtcgcgctttgagggaatgagggttgtagtaaatgccctgctggga
gccatcccttccatcatgaatgtgctactagtgtgtttgatcttctggctgatcttcagt
atcatgggggtgaacctttttgcggggaaatactaccattgtgtcaatatcaccaacgat
gagatgtttcccatcagtgtggtcaataacaggtcagattgctttgccctgattgcgaac
aatgactcggcgcgctggaaaaatgtgaagattaatttcgataatgtgggagctggatac
ctggcactactgcaagtggccacatttaaaggatggatggacatcatgtatgcagctgtg
gattctcgtgatttggagcagcagcctgactatgaatcaaacctttacatgtacctgtac
tttgtcatcttcattatcttcggctccttctttactcttaacctcttcattggtgtcatc
atcgataacttcaatcagcagaagaaaaagataagaggtcaggatatcttcatgacagaa
gaacaaaagaaatattacaatgccatgaagaaactgggatctaagaagcctcagaaacca
attcccaggcctgcgaacgtgtttcaaggcctcatctttgacttcatcaccaaacaagcc
tttgacattgtgattatgatcctgatctgcttgaacatggtgaccatgatggtggaaacc
gacgatcagacaaaggatatggacaatattctgtactggataaacctggttttcatcatc
ctcttcactggagaatgtgtgctcaagatgatctccctgcggcactactacttcaccgtt
ggctggaatgtgtttgactttgtagtggtgattctctcaattgttggcatgttcctctct
gatatgattgagaaatattttgtatcgccaacgttattccgagtcatccgacttgccaga
atcggccgtattcttcgtctcatcaaaggagccaaaggcattcgtacactcctgtttgcc
ttgatgatgtcacttcctgccttgttcaatattggcctcctcctgttcctggtcatgttt
atctatgccatcttcggaatgtccaactttgcctacgtgaagcacgaggcggggatcgat
gacatgtttaactttgagacattcgggaactcgatgctttgcttgttccagattacaact
tcagctggatgggacggcctcctggcacccatactgaacaagcaagatccggattgcgac
agcgaattggagcacccaggcagtatgtaccgcggcgactgcggaaacccctcggtcggc
atcttcttctttgtaagctacattatcatctgcttcctgattgtggtgaacatgtacatc
gccgtgatcttggagaacttcagcgtagccacagaggagagcgctgaaccactgagcgag
gacgactttgaaatgttctatgaagtctgggagcgattcgatcctgacgccacgcagttt
gtggagtacgagaagctttctgaatttgccgatgctttggatcctccgttacgtatcccc
aagccaaacaagatccagctcatagccatggacctgcccatggtcagtggagaccgcatc
cactgcctggatatcctgttcgcctttaccctgagggtactgggagaggagggcgagatg
gatgccctgaggggacaaatggaggatcgtttcatggcctccaatccctccaaagtctcc
tacgagccaatcacgacaactctccgcaggaaacaggaggagatgtcggccatcgtcatc
cagagggccttccgacggtaccgtataaggcaaacggtaaagaaggcctccgaagcctac
cgacagcagctgcaagatgggagtgggtgcatcccggagaaagaggtgctcgtcattgaa
aagtttcaagagaactctgcatcggaaaaaacggatatgactccttcctctgcctctccg
ccgtcttataacagtgtggccaagtcagagaaagacaaatacgaaaaggagaggagggaa
aaggagtacaaagcaaaagatgcaagagacagaaaaaaatga
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