KEGG   Carassius gibelio (silver crucian carp): 127962477
Entry
127962477         CDS       T08819                                 
Name
(RefSeq) DIS3-like exonuclease 1
  KO
K18681  DIS3-like exonuclease 1 [EC:3.1.13.-]
Organism
cgib  Carassius gibelio (silver crucian carp)
Pathway
cgib03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    127962477
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cgib03019]
    127962477
Messenger RNA biogenesis [BR:cgib03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Exosome cofactors
     127962477
SSDB
Motif
Pfam: RNB OB_Dis3 CSD2 Rrp44_CSD1 Rrp44_S1 OB_HELZ2
Other DBs
NCBI-GeneID: 127962477
NCBI-ProteinID: XP_052418017
LinkDB
Position
B7:complement(16227623..16236614)
AA seq 1062 aa
MEGPIMIKTEKVLHLNSSKGRKVRVVREHYVREQVPCGSSLCQADCLNDGKVLSEDVTHY
VVPDVGVVRDFLEILEFRELQGIVFTQTAYQTVQHTRGRRHYNRLRALLKDPRHDCVLFA
NEFQQYCHCPRDKGESQDKWHTRNVYNAAVWYYNHLAGLQPVVMITEDNDAISEFSALNS
GVYVISTQDYLLSFWPDLQAAHDLYSSIAQTLQERESEAVEKVYTEHLPAEVLEAGIKSG
RYIQGILSVNKHRAQNEAFVRYEGSASKNTDLNSDVLINGAKLRNRAVHGDMVVIELLPR
NEWKGRTMALTEGQGEEQPLEETQSQPMPSGRVVGILQRNWRDYVVTFPPLEEVQSQSRN
SQKILVIPWDYRIPKIRISTQQAEALQDQRVIVRLDSWESTSVYPSGHCVRVLGKAGELE
TEIQTILLENSIHVPPFSEAQLREMPVNTEENRWQMDSSEVSSRRDLRDTHLVFSIDPKG
CEDVDDTLSVRTLPGGKRLELGVHIADVTYFVREGSLTDLEARSRATTYYLADRRYDMLP
AVLSADLCSLLGGVDRYAMSVLWELDAETLDVCTVWYGRTLIRSSYQLHYELAQSLLNGE
EVEVPELSRLKGSQRDQKLVELLQALETLTRVARHLRAQRDKGGALELEGVEVRAQLDEE
KNITALVPKQPLEVHETVAECMIYANHWVARKIQESFPHQALLRHHPPPKQEFFSQLIDC
AKARGFSIDTRSNRALADSLEQAVDRQDPLVNRLLRMMATQAMSNALYFSTGACPEEQYY
HYGLALDRYTHFTSPIRRYADVLVHRLLMAAIQLEKEGSLAKPLASNKELEELAQHINNK
NRAAQHAQKQSTELFQCLYFRDKDSKTDERCVADAVIYAIRANGFLAFIPQYGVKGAVYL
KDREGQVVSVDGDGRCEWKAGTLQRYPDRISSCTSTGTHTFYLFSHVTVRISVEPSRCHA
DSLCLELIRNKPHCPVQPESQPAGGGRSELVQEVVRRAEEASLQAVEERGRKPKLSREER
QFRQSRTPNLYVLLQEISELALLDLSVCQIRNTEEQTSTASS
NT seq 3189 nt   +upstreamnt  +downstreamnt
atggaaggtccgatcatgattaagaccgagaaagtgttacatttgaacagctcgaagggt
agaaaggtccgtgtggttcgggagcactatgtgagggagcaggtgccctgtgggagctcc
ctctgtcaagcggactgccttaacgatgggaaggtgctgtctgaagatgtgacccactat
gtggttcccgatgtgggggtggttcgggatttcctggagatcctggagttcagggagctg
caggggatcgtatttacccagacagcctaccagactgttcagcacacccggggacgcagg
cactataacagactgcgtgctttgctgaaggaccctcgccatgattgtgtgctgtttgcc
aatgagtttcagcagtactgccactgccccagagacaagggcgagtctcaggacaaatgg
catacaagaaatgtgtacaatgcagcagtttggtactataatcatctagctggactccag
ccggtggtcatgattacagaagataatgatgctatttcagaattcagtgccttaaacagt
ggagtgtatgtcatctcaactcaggattacctgttaagtttctggccggacctgcaggcc
gcccatgatctgtacagctccattgctcagaccctgcaggagcgagagagtgaggcagta
gagaaggtgtacactgaacacctgcctgcagaggtgctggaggctggaataaaatctggc
aggtacatccagggcatcctcagtgtgaacaaacatcgagcacagaatgaggcttttgtc
cgttacgagggttcagccagcaaaaatacagatctaaatagtgatgtgctgatcaatgga
gcaaagcttcgtaaccgggcagtgcatggagacatggttgtcatagagctgttgccccgt
aatgagtggaaaggcaggactatggcactaacagagggtcaaggggaggagcagccactg
gaggaaacacagagtcagcccatgccctcaggcagggtggtgggtattctgcagaggaac
tggagagactacgttgtgacttttcctcctcttgaggaggtgcagtcacagagtcgaaat
tcacaaaagattctggttattccatgggactaccgcatccctaaaatccggatcagcaca
cagcaggctgaggctttgcaggatcaaagagtgattgtgcgtctggattcgtgggaaagt
acttctgtgtaccccagtggccactgtgtgagggtcctggggaaagcaggcgagctggag
actgagattcagaccatcctgttggagaactctatccatgtcccaccattctcagaggca
cagttgcgagagatgccggttaacactgaggagaaccggtggcagatggacagcagtgaa
gtgtcgtctcggcgggacctgagagacacacacctggttttcagtatcgatcccaagggc
tgtgaggatgtggatgataccttgtctgtgcggactctgcctgggggaaagcggttagag
ctgggcgtccacattgccgatgtcacttactttgtcagggagggctctcttacagatcta
gaggcacggtcaagggcgaccacttactacctggctgaccgcaggtatgacatgctgcca
gcagttctgagtgctgacctgtgctccctccttggaggagtggaccgctatgccatgagt
gtgctgtgggagctggatgctgagactctggatgtgtgtacagtttggtacggtcgtact
ctgatccgctcctcctatcagcttcactatgagctggcccagagtctgctgaatggcgag
gaggttgaggtacctgagctaagccggctcaagggttcacagcgagaccagaaacttgtt
gaactcttgcaggccctagagaccctgacgagggtggccagacacctccgtgcacagaga
gataagggtggtgctctggagttggagggggtggaggtgagggctcagctggatgaggag
aagaacattacagcacttgttcccaaacaacctctggaagttcatgagactgtggcagag
tgtatgatctatgccaaccactgggtggcacgcaagatacaggagagctttccacaccag
gctctcctgcgtcatcacccaccacccaaacaggagttcttcagtcagctcatcgactgt
gccaaggcccgtggcttcagtattgatacaaggtcaaacagagctcttgctgattctctg
gaacaagctgtggatcgtcaggaccccctggtgaacaggttattgagaatgatggccacc
caggcaatgtctaatgccctttacttctccacaggagcctgcccagaagaacagtactat
cactatggtcttgctctggatcgatacactcactttacctctccaatcagacgctatgct
gatgtattagttcaccggctgctcatggctgctattcagctggagaaggaaggatcgcta
gccaaacccttggccagtaacaaagaactcgaggaactagctcaacatatcaacaataaa
aacagagcagcacagcacgcacagaagcagtccacggagctcttccagtgcctctacttc
agagacaaagactccaaaacagatgagcgctgtgtggctgatgctgtcatctatgctatc
cgagctaacggctttcttgccttcataccacagtatggtgtgaagggagctgtgtacctt
aaggatcgagagggtcaggtggtcagtgtcgatggagatggaaggtgcgagtggaaagct
gggacattgcagagataccctgacaggatcagcagctgcactagcactggaactcatacc
ttttacctcttcagccacgttacagttcgtatctctgtagaaccgtcgcgctgtcatgcc
gacagcttgtgcctggagcttatcagaaacaagccccattgccctgtgcagcccgagtcc
cagccagctggtggcggtcggtctgagctggttcaggaagtagtgcgcagggcagaagag
gcttccctccaggcggtggaagagagggggaggaagcccaaactgagcagggaggagagg
cagttcagacagagcagaacaccaaacctctatgtcctgttacaggagatcagtgaactt
gctctactggatctgtctgtctgtcaaatcagaaatacagaggaacagaccagcactgca
tcttcttag

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