Carassius gibelio (silver crucian carp): 127963278
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Entry
127963278 CDS
T08819
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cgib03000
]
127963278
04121 Ubiquitin system [BR:
cgib04121
]
127963278
Transcription factors [BR:
cgib03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
127963278
Ubiquitin system [BR:
cgib04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
127963278
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
zf-BED
hAT-like_RNase-H
L544_NTransf
Motif
Other DBs
NCBI-GeneID:
127963278
NCBI-ProteinID:
XP_052419061
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Position
B8:23130704..23133987
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AA seq
664 aa
AA seq
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MRFSNRNVRDLRWARDASERAENSSATTFHPVSSSLTCSAMASASTEQSVTYTAATLISK
RNSTSVVWNYFGFKKEDAAQLQVLCRACRAPVATSRGNTTNLFQHLKKYHKSMYDSCMTK
MPSTSAPDRPNTSRQGSLNEMFESVTPYERNSKRHGEITRAITEFIAKDMMPLSTVTKPG
FVALTYTLDKRYNIPSRTYFSQTAIPELYKKCKEKVATEVKTVEFFASTTDMWSSRTAEP
YQSLTVHFIDEDFNLRARCLQTTYFPDDHTGENIAAGLREGLASWDLHEENHICITTDNA
SNMVLAARLNEWTRLQCFGHRLHLAIENALKDDRVSRATALCRKLVGHFSHSWKKKAALM
EAQRELKLPEHNLITECPTRWGSKEMMIARVLEQAKAISQVLSGDRYARSLIPTWQDIDV
LESIHKALHPLLEFTDALSGEEYVSISYLKPVLHLFATSVLAEDAEDTDLTKSIKTQVLA
YLNNKYGDPNIQELLDVACFLDPRFKIQYISTDNIPAIKTRLKTEMVDLAQRTYHREKRS
RTETVQMPQSAQPLGEKAKRSLGSFFKTSAASPSLPVEDVAEAELNNYLMTPTIDGEDDP
LAWWRVHKISYPQLCIMARKYLCVPATSAPSERLFSTGGNIVSCTRSSLKPAKVNILVFL
AKNL
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgcgattttctaatcgcaacgtgcgcgatttgaggtgggcacgtgacgcgagcgaaaga
gcggagaactcgtctgcaacaacttttcatcctgtcagttcatctttaacctgtagcgca
atggcctctgcctcgacggaacagtcagtaacttacacagctgcgactttaatctcaaag
aggaacagcacgtcggtggtgtggaactattttggtttcaaaaaagaagatgctgcacag
cttcaggtgttatgcagagcatgccgtgctcccgttgcgacttcacggggtaacactaca
aacttgtttcagcacttaaaaaaataccacaaatcaatgtatgacagttgtatgaccaaa
atgccgagcaccagtgcgccagacaggccaaatacctcaagacagggatcactgaacgaa
atgttcgaaagtgtcactccgtatgaacgtaattcaaaacggcacggggaaatcactcgg
gcaataaccgagttcatagccaaagatatgatgcctctcagcacggtgaccaagcctgga
ttcgtggcattgacatatacacttgataaacggtacaatataccctcccgtacatacttc
agtcagactgccataccggagctgtacaaaaagtgtaaagagaaagtcgccacggaggtt
aaaacggtggagttttttgctagcactacagatatgtggtcaagccgcacagctgagcct
taccagagtcttaccgtccattttattgatgaagatttcaacctcagagctcgctgccta
caaactacctacttcccagacgaccacacaggggaaaatattgcagccggcctgagagaa
gggcttgccagctgggatctccacgaggagaatcacatctgcatcacgacggacaacgcg
tcaaatatggttctggctgcgcggcttaatgaatggacgaggctccagtgttttgggcac
agattacatcttgccattgaaaatgcactcaaagatgacagagtgtcaagggcaacagca
ctgtgcaggaagctggtgggacacttttcccacagttggaagaagaaggcagcactgatg
gaggcacagagggagctcaaactccctgagcacaacctcataacggagtgcccaacaaga
tggggatctaaagaaatgatgattgctagagtgcttgaacaggccaaagccatttctcag
gtattgtctggagatcgatatgcacgctccctcatcccaacctggcaagatattgatgtg
ttggagtcgattcacaaggcactgcatcctctactggaatttactgatgctctttctgga
gaggagtatgtgagcatctcctacctcaagccagttcttcacctttttgccacatcagtc
ctggctgaagatgctgaggacactgacctgactaaatcaataaaaacccaagtcctagca
tacctcaataataaatatggagacccaaacatccaggagcttttggatgttgcctgtttc
ctggaccctaggttcaaaatacagtacatcagtactgacaacatccctgctatcaagacc
cgactgaagacagagatggtagacttagcacagcgtacatatcatcgggagaagaggtct
cgtactgaaactgttcagatgcctcaaagtgcacagcccttgggggaaaaggcgaagagg
tctcttggcagttttttcaagaccagtgcagcctctccttctttgcctgttgaagatgtc
gcagaggcagagttaaacaattacctgatgactcctaccattgatggagaagatgatccc
ttggcttggtggagggtgcacaagatcagctacccacagttgtgcatcatggcccgcaag
tatctttgtgtacctgccacaagcgctccctcagagcgtctttttagcacaggagggaat
attgtgagttgcactcgctcatccttgaagccagcaaaagtcaatattctggttttctta
gcaaaaaacctgtga
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