KEGG   Carassius gibelio (silver crucian carp): 127963409
Entry
127963409         CDS       T08819                                 
Name
(RefSeq) nephrocystin-4 isoform X1
  KO
K16478  nephrocystin-4
Organism
cgib  Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:cgib03037]
    127963409
Cilium and associated proteins [BR:cgib03037]
 Primary cilia and associated proteins
  Nephronophthisis-related proteins
   127963409
SSDB
Motif
Pfam: DPCD
Other DBs
NCBI-GeneID: 127963409
NCBI-ProteinID: XP_052419266
LinkDB
Position
B8:complement(11935222..12085709)
AA seq 1427 aa
MSDWNTAFLSSRVIPPHSQTARQAPGASRGLQLLFRHIDGLHLKQSESPASLQYQLRVTL
FDSGHQHFFGRTWRSGSYSVSGMQGQSGRVLFNEVVYFHTSLCLSSVVAVVELVSLSTRA
DGSQDAVGSGFGLLQLFTGHADTSISQGEGRLSLFNGTPRALLHPELKDPLQLNAVLSVM
EGSQLLYSIQPHPALTPIMHLLPPNILVSGHDSIPGVVPSTDTGTADVLRKPRLLKSFSC
VLDGLRVALLPSVEVFESNLLQLLNRDCQNTNRGVEGRSVVVQERRLLVGVHNGWGWVEK
PHVLVLECEAGGSGASRAHGASASGSFRQTSTDKLSDGLSLRGSVELKMMRDVAFSIVFQ
LQYVFSCPLAGDGQMTSTAVPRAAFMQCVRWCAWSLFSDPEGPGENVCLHLQGGALPNPW
GVMVYSASTQQTNSGKCVIKFKFSSSVEGASCGTALNVSHRETSPPKKLLSAPQDERILE
PMASTQQSPRGPALSLSQLVATSRYPTMSHTVGSPWQQQLPSLLSPSPMASAHQLSHVER
PVAGSIAHLELSVQEREGNRSEEEDEMQELTFTPVHAPVITLGTHTAGSSRSTSRRSLAQ
LFSSGFPQILDTQNQVAEVLDASEPVNFNPQREEADPLQANTLILQFLAFTRVPQAGVIS
DWPRTVHFTFQLYRFPPVTTERLKLLDPERNSKLKSGSDYPCVLSVINKDGTFSSGCPGL
QLQYRVDPQFLKPGERGWFLRYLALHSLQIDVWDSESLMLIGSAAVELKHMLRQGRAAVQ
VNHELEVITTEYLQDASFASRHDNKHSATPAISVYTTVKGILHLRLGNVGGSVKNSQSSL
DLPPSLSHVVQPSDAPQGFAGGGVPALTVLQLNASNARRARRLPEIDSELARLLQSTMRE
VGGATLHQQAEAKEVRQRKIDRMAAVRQLEEQKATPPFQDSSNITSHRAERVQHSRDLRV
IEAYRERCKAQEITNMLSQAITTKHTLYASLGTAEFFEFVLKNPFNVPQTVTIECDDPEL
CVMVKTEEWRYFKELTKTLTPLEEEMFHVKESTQTPQVYLRPKESVHVPFKYQTFICGHT
FPLQDMKGLKTSRSPQMAQKHLSNTINAKSIKVLFRGEDRKPLAICQVDVEPMPHVVDQT
FRFYQPELTFLKKAIRLPAAWDDTADGSATLHVRCSDHNVICHTTNLTPGEPQDVYLKVP
GSPSPQIRKFFITIFTDPWLASPAQIWQVYVHYLQRMDLSCVCGTLSWHSLVLHGTQTIR
RVKCYTSHPLELQVDPGEVFALPAHGVQDVCVGLRTLRPGSRFFYLNVVDVDTRQLVASW
LLCITCRQPVISKAFEISVPVDGGKGSNKKISFTNPYSSSRVFNLRTDRPDLLQFKEEQF
QIGGGELYTIGLRFAPSQNPGMEEILIFINDKQDKNEDTYCVRVQYR
NT seq 4284 nt   +upstreamnt  +downstreamnt
atgtctgactggaacaccgctttcctgagcagccgcgtgatcccgcctcacagtcagaca
gccagacaagctccaggagcttctcgaggtctacagctgctcttcagacacatcgatgga
cttcacctaaaacagtcagagtcaccggcatcgctccagtatcagctgcgcgtgaccctg
tttgactcgggtcaccagcacttcttcgggcgcacatggaggagcggctcatactctgtc
agtggcatgcagggtcagagcggtcgagtgctcttcaatgaggttgtgtacttccacact
tcattgtgtttgagttctgtggtggcagtggtggagttggtgtctctgtcaaccagagca
gacggttcccaggatgcagtggggtcagggtttggactgctccagctcttcacaggtcac
gcagacaccagcatctctcagggggagggcaggttgagtctgttcaatgggacccccaga
gccctcctgcacccagagctgaaagaccctctgcagttgaatgctgtattatcagtgatg
gagggctctcagctgctctactccatacagccacacccagctctcactcccatcatgcac
ctgctcccgcccaacattctggtgtctggacatgacagcatccccggtgtggtgccgtcc
acggacacaggcacagcagatgtgctgcggaaacctcgtctattgaagagcttctcgtgt
gtgttggatggcctacgtgtggcactcttgccctccgtggaggtcttcgaatctaaccta
ctccagctgctcaacagagactgccagaatacaaacaggggtgtggagggacgctctgtc
gtggtgcaggagcgcagactgctggttggggttcataacggctggggttgggtggagaag
cctcatgtgttggtgctggaatgtgaggccggagggagcggagcatccagggctcatgga
gccagtgcaagcggcagcttcagacagacctccacggacaaactcagtgatggactgtct
cttcgtggcagtgtggagctgaagatgatgagggacgtggctttcagcatcgtcttccag
ctccagtatgttttctcttgtcctctggctggagatgggcagatgacatccacagctgtg
cccagagcagcgtttatgcagtgtgtgcgttggtgtgcttggagtctgttttcggatcct
gagggccctggagagaatgtgtgcctccacttgcagggcggtgctctccccaacccttgg
ggtgtcatggtctattctgcaagcacacagcagactaattcggggaaatgtgtcatcaag
ttcaagttttcgtctagtgtggaaggagcttcttgcggcacggcattgaatgtgagccac
cgggaaacatcgccacctaagaagttactttcagcaccccaagacgaacgcatcttggag
ccgatggcttcgacgcagcagtctccacgcggcccagcgctgtctctctctcagctggtt
gcgacttcacgctacccaaccatgagccacacggtggggtctccatggcaacaacagctc
ccctctctgctttctccctccccgatggcatcggcccaccagctgtcacatgtcgagcgt
ccagttgccggcagcatagctcatctggagctgagtgtgcaggagagagagggaaacaga
agtgaggaagaggatgagatgcaggagctgaccttcactccagtgcacgcccctgtcatc
accctcggaacacacactgctggctcctccagatcgacctcccggagatctttggcccag
cttttctcctctggttttccacagatcctggacactcagaaccaggttgctgaggttctg
gatgcttctgagcctgtgaactttaacccccagagagaagaagcagatcctctgcaggcc
aacactctcatccttcagttccttgcttttaccagggtcccacaagctggtgtaatttca
gactggcccagaactgtccatttcaccttccagctttaccgatttccccctgtcaccacc
gagcgtctgaagctgcttgacccggagaggaacagcaagctgaaatccggctctgattac
ccctgtgttctctctgttatcaacaaggacggcacattcagctctggttgtcctggtctg
cagctgcagtacagagttgacccgcagttcctcaagccaggcgaacgtggctggttcctg
cgatacctggcactccactccctgcagattgatgtctgggacagtgaatccttaatgctt
attggctcagctgctgtggagctgaagcatatgctccgtcaaggccgtgcagccgtccag
gtgaaccatgagctggaagtgatcactactgagtacctgcaggatgccagctttgccagc
aggcatgacaacaagcacagcgccactccagccatcagtgtctacactaccgtaaaagga
attctgcatctgcggcttggcaacgtcggtggcagtgtgaaaaattcccagagttctttg
gatcttcctccatcgctctcccatgtggtccagcccagcgatgcccctcagggttttgca
ggaggaggtgtccccgctttaacggtcctccagcttaacgcaagcaatgccagacgagcc
cgccgattgccagaaattgacagtgagctggccagactgctacaaagcaccatgagggaa
gtaggcggagccacactgcatcagcaggccgaagcaaaggaagtgcgccagaggaagatt
gacagaatggcagctgtccgtcaacttgaggagcagaaagccacgcccccttttcaggac
agctcaaacatcacgagtcatcgggcagagcgtgtgcaacattcccgtgacctgcgtgtg
attgaggcctatcgtgagcgctgtaaagcacaggagatcaccaacatgctctctcaggcc
atcactaccaaacacactctctacgcctcgctaggaacggcagagttcttcgaatttgtg
ctcaagaatccattcaatgttcctcagactgtcactattgaatgtgatgacccagagctc
tgtgtaatggtgaaaactgaggagtggagatatttcaaggagttgacgaagactctgact
cctctagaggaggagatgtttcacgtgaaggagagtacacagactccacaggtttacctg
cggcccaaagaaagcgtccatgtccccttcaagtaccagaccttcatctgtggtcacacc
ttccctcttcaggatatgaaaggcttaaagacttcaagaagtccacagatggctcagaaa
catctgtccaatacaattaatgccaaatccatcaaggtgctgttccgcggggaagacaga
aagcctctggcgatctgccaggtggatgttgaacccatgccacatgtggtggaccagacc
ttccgattctaccagcctgaactcacctttctaaagaaggccattcgcctgcctgcagcc
tgggacgacacagcagatggttctgccaccctccatgtgcgctgcagcgaccacaatgtc
atctgccacaccaccaacctgactccaggagaaccacaggatgtttacctgaaagtacct
ggtagcccaagtccacagattaggaaattcttcatcacaattttcactgacccttggctg
gcctcccctgcgcagatctggcaggtatacgtgcattacctgcaaaggatggacctgagc
tgtgtgtgtggcactctgagctggcattccctggttctgcacggcacacaaaccattcgc
agggtcaagtgctacacgtcgcatcccctcgagcttcaggtggatccaggtgaagttttt
gctcttcctgctcatggagttcaggatgtctgtgtgggcctgaggactctgcgccctgga
agccgtttcttttacctcaatgtggtcgacgtggacactcggcagctggttgcctcctgg
ctgctgtgcatcacatgtcgacagcctgtaatctccaaggcgtttgaaatcagcgttcct
gtagatggagggaagggcagcaataagaaaatcagtttcacaaacccctactcgtcctcc
agagtattcaatctgcgcacggatcgcccagacctgcttcagtttaaagaggagcaattt
cagattgggggaggggagctgtacaccatcgggctgcgctttgctccaagtcagaaccct
ggcatggaagagattctcatctttatcaatgacaaacaggataagaacgaggacacttac
tgtgttagggttcagtaccgataa

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