Carassius gibelio (silver crucian carp): 127963663
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Entry
127963663 CDS
T08819
Name
(RefSeq) calcium channel, voltage-dependent, L type, alpha 1S subunit, b
KO
K04857
voltage-dependent calcium channel L type alpha-1S
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04010
MAPK signaling pathway
cgib04020
Calcium signaling pathway
cgib04260
Cardiac muscle contraction
cgib04261
Adrenergic signaling in cardiomyocytes
cgib04270
Vascular smooth muscle contraction
cgib04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
127963663
04020 Calcium signaling pathway
127963663
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
127963663
09153 Circulatory system
04260 Cardiac muscle contraction
127963663
04261 Adrenergic signaling in cardiomyocytes
127963663
04270 Vascular smooth muscle contraction
127963663
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cgib04040
]
127963663
Ion channels [BR:
cgib04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
127963663
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
GPHH
Ca_chan_IQ
PKD_channel
Motif
Other DBs
NCBI-GeneID:
127963663
NCBI-ProteinID:
XP_052419641
LinkDB
All DBs
Position
B8:13901637..13918905
Genome browser
AA seq
1851 aa
AA seq
DB search
MEAGGGAGGGVAALASFIMNEEELKRKQREKLKKLQATGGNPRPPRSLFFFTLKNPFRKT
CMNIVEWKPFEIIILLTIFANCIALAVFLPMPEEDTNNTNLTLESLEYIFLVIFTLECFL
KIVAYGLLFHEGAYLRNCWNILDFVIVFMGLFTLVVDTINSIAGVPKEKGGGFDMKALRA
FRVLRPLRLVSGVPSLQVVMSSILKSMLPLFHIALLVFFMVTIYAIMGLELFKCKMHKTC
YYQGTNIIAIRENEKPSPCAQAGHGRRCTINGTECRAGWPGPNFGITHFDNFGFAMLTVF
QCITTESWTDVLYWINDAMGNDWPWIFFLTLILVGSFFILNLVLGVLSGEFSKEREKSRS
RGEWQQLRERQQMDEDLEGYMEWITHAEVMDGDSETLLLLRKDTDSETDNLYQREGIINR
VIYFYRLARRWNIVLRRKCHVWVKSKFFNWWVLLVVLLNTLVIAMEHHNQTEGLTRFQDT
ANVLLLACFTIEMVMKMYAFGLRAYFMSIFNRFDCFVVTIGLLEIFLVVSNIMTPLGISV
MRCIRLLRLFKLTRYWTSLNNLVASLLNSVKSIASLLLLLFLFIVIFALLGMQVFGGKFN
FPDRVIQRSNFDNFPQALISVFQVLTGEEWDSIMYNGIMAHGGPQSPGILVSIYFIILYV
CGNFVLLNVFLAIAVDNLAEAESLTAAQKEKEEEKARRKLMRLPEKSEEEKALMAKRLME
SRSKAEGMPTTAKLKIDEFESNVNEVKDPFPPADFPGDDEEEEPEIPISPRPRPMADLQL
KETVVPMPEASSFFIFGPQNKFRKLCHRIINHTTFTNIILLFILLSSISLAAEDPIDPRS
FRNKVLAYADIVFTTVFTIEIVLKMTVYGAFLHTGSFCRNSFNILDLIVVGVSLLSMGME
SSTISVVKILRVLRVLRPLRAINRAKGLKHVVQCMFVAIKTIGNIVLVTMLLDFMFACIG
VQLFKGKLYYCTDPLQNTAEECQGTFLKHVQNSLHDMEVHQRMWVNSDFNFDNVLNGMLA
LFTISTFEGWPEILYKAIDSNAVDTGPLHNNRVGISIFFIIYIIIIAFFMMNIFVGFVIV
TFQKQGEQEYKNCELDKNQRQCVQYALKARPLKCYIPKNPHQYRVWYFVTSCYFEYLMFF
LIMLNTLCLGIQHCNQSDHITKLSDTLNLIFTVLFTGEMIVKLIAFKAKGYFGDPWNVFD
FIIVIGSIVDVVLSEVDAALEAGGGLWCLQGCAEVNPMQAIAEAENVRVSITFFRLFRVL
RLIKLLNRSEGIRNLLWTFIKSFQALPHVALLIVMLFFIYAVIGMQMFGKIALVDGTEIN
RNNNFQTFPQAVLLLFRVATGEQWPKVMLASMYGKLCDAKSDYGPGEEYTCGSSIAVFYF
LSFYMLCAFLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFKKIWAEYDPEATGRIKHLD
VVTLLRRIQPPLGFGKFCPHRSACKRLISMNMPLNSDGTVTFNATLFALVRTALKIKTEG
NFEQANEELRAIIKSIWKRTSMKLLDQVIPPIGEDEVTVGKFYATFLIQEHFRKFMQRQE
EYYGYRPTKKNADEIKAGLRSIEEEAAPELHRAISGDLIAEDEMERDLEAGEEGIYRRTG
GLFGLNTDPFSSEPNSPLSTQVTSQRPLQFVETRLEDIDSPPDSVFLPNTEFFPDNMPTT
SNTNNNANFVEDMSSRFTFENESLSAAATRNYSYEDIRDSSSYVGGASSVDNRRLSDFTV
RTNITQFPYDPSYGPSKNQTAATEASPATNKLIQQALRDGGLDSLAEDPQFVSVTRKELA
EAINIGMKDMEGMAQGIVNGQSGKVTKRKRRPIPVPPDTMSSKPKESTSAV
NT seq
5556 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgggcggtggtgctggtggtggggtggcagctttggcctcattcatcatgaat
gaagaagaactgaagagaaagcaaagggagaaactcaagaaactacaggccacaggagga
aaccctcgaccgccacgttccttgttcttcttcacgctcaaaaaccctttccggaagacc
tgcatgaacattgtggaatggaaaccctttgaaatcattatcctattaactatcttcgct
aactgtatagctctggccgtgtttctgcccatgcctgaagaggacaccaacaacaccaac
ttaacattggagagtctggagtacatcttcctggtcattttcactctggagtgcttccta
aagatagtagcatacgggcttttgttccatgaaggggcctatttacgaaattgttggaac
atattagactttgtcatcgtgttcatggggctcttcacacttgtcgtggacaccatcaac
tcaatagcaggagttcccaaagagaaaggaggagggtttgatatgaaggctctaagagcg
tttcgagtcttgcgaccactgcggctcgtgtccggagttcccagcctccaggtggtaatg
agctctattctgaagtccatgttgcccctcttccacattgcattgctggtcttcttcatg
gtcaccatttatgccattatgggtttggagctgtttaagtgtaaaatgcacaagacatgt
tactaccagggcactaatatcattgccatcagggagaatgagaagccctcgccctgtgct
caggctggacacgggcgccgctgcaccatcaatggcactgaatgtcgggcaggttggcct
ggtcccaactttggcatcacccattttgacaactttggctttgccatgctcacagtcttt
cagtgtatcacaacggagagctggactgatgttctctactggattaatgatgccatgggg
aatgactggccctggatcttcttcctgactctgatacttgtgggctccttcttcatcctc
aacctcgtccttggagtactgagcggggagttttctaaggaaagggagaagtcacggtca
cgcggagagtggcaacagctacgagagcgacaacaaatggatgaggatctggaaggatac
atggaatggatcactcatgctgaagtgatggatggagattctgagacacttcttcttctt
agaaaggacactgattcagagacagacaatttataccagagggaggggatcatcaacagg
gtgatctatttctaccgtctcgcacgccgctggaacattgttttacggagaaagtgtcat
gtttgggtgaaatctaaattcttcaactggtgggttctccttgttgtgttactcaacacc
ctggtcattgcgatggagcatcataaccagacggaggggttaacacgttttcaagacact
gccaatgtacttctactcgcctgtttcacgattgagatggttatgaagatgtatgcattt
ggtctgagagcctacttcatgtccatctttaaccgatttgactgttttgtggtcacgatt
ggattactggagatcttcttggtcgtgtcaaacatcatgacaccactggggatctccgtg
atgagatgcatacgactcctgcgcttgttcaagctcacaaggtactggacatcacttaat
aacttagtggcatccttactcaactcagtcaaatccatcgcctccctgctcctgctcctc
ttcctcttcattgtcatctttgctctgctgggtatgcaggtgtttggtgggaaattcaac
ttccctgacagagtgattcagcgcagcaactttgacaacttcccacaggccctcatcagt
gttttccaggtgctaactggagaggagtgggactccattatgtataatggaatcatggct
catggtggacctcagtccccaggaattcttgtcagcatttacttcataattctgtatgtc
tgtggaaacttcgttctcttgaatgtgttcctggccatcgctgtagacaatctagccgag
gctgagagtctgacagcagcacagaaagagaaagaggaggagaaagccagaaggaaactc
atgagattgccagagaaaagtgaggaggagaaggccctgatggctaagagactaatggag
tccaggtcaaaagccgagggaatgcccaccacagcaaagctcaagatagatgagtttgaa
tcaaatgttaatgaagtgaaagaccccttccctcctgcagactttccaggtgatgacgag
gaagaggaaccagagatcccgatcagccccagacccagacccatggctgacctacagctg
aaggagacagtggtgcccatgcctgaagcaagctcctttttcatctttggcccacagaac
aagttccggaagctttgccacaggatcatcaaccacacgaccttcaccaacatcatcctc
ctcttcatcctcctcagcagtatctccctggctgctgaagaccccatcgacccccgttca
ttccgaaacaaggtcctggcttatgctgatattgtttttacgactgtcttcaccattgaa
attgtgctaaagatgacggtttatggagcgttcctgcatactggctctttctgcagaaac
tccttcaacattttggatctcattgttgtgggtgtttccctcttgtccatgggcatggag
tcgagtactatctcagtggtgaagattctcagggtgttgagggtactaagaccgctaagg
gccatcaacagagccaaagggttaaagcatgtggtccagtgtatgtttgtggccataaag
accattggtaatattgtcctggtcaccatgctcttggacttcatgttcgcctgcatagga
gtgcagctcttcaagggcaaattgtactattgtacggacccccttcaaaatacagcagag
gagtgtcagggaacatttttaaagcatgtgcaaaactctcttcatgacatggaggtccat
cagcgcatgtgggtcaacagtgatttcaactttgacaatgtcctgaacggcatgctggct
ctcttcaccatctccacatttgagggctggccagagatcctgtataaagctatagactcg
aatgcagtagacacaggccctttgcacaataaccgagtgggcatctccattttctttatt
atctacatcatcatcattgctttcttcatgatgaacatctttgtgggcttcgtcatcgtc
actttccaaaagcaaggagagcaggaatacaagaactgtgagctagacaagaaccagcgt
cagtgtgtgcagtatgcactgaaagcacggcccctcaagtgctacatcccaaagaacccg
caccagtaccgtgtgtggtactttgtgacttcttgctattttgagtacttaatgttcttt
ctcatcatgctcaacacactgtgtcttggaattcagcactgcaaccagtccgatcatata
accaaactctcggacactctcaacctcatcttcacggtcctgttcactggcgagatgatc
gtcaaactcattgcattcaaagcaaagggttactttggagacccttggaatgtgtttgat
ttcatcatcgtgatcggtagtattgttgacgtggtcctcagtgaggttgatgctgcgctg
gaggccggtggaggactgtggtgtctacaaggttgtgcggaagtgaatccaatgcaggca
atagctgaggcagaaaatgtccgagtttccatcacgttcttccggctgttccgtgtgctg
cgtctcattaaactgctcaatcgctcagagggcatcaggaaccttctgtggacctttatt
aagtccttccaggcgctgcctcatgtggctcttctcattgtcatgctcttcttcatctat
gctgtgatagggatgcagatgtttggtaaaattgctctggtcgatggtacagagattaac
cgcaacaataatttccaaactttccctcaagctgtattgttattgttccgtgttgccact
ggagagcagtggcctaaagtcatgcttgcctctatgtatgggaagctctgtgatgccaaa
tcagactacggccctggagaggagtatacctgcggctccagcatcgcggtcttctacttc
ctcagcttttacatgctgtgtgcatttctgattattaatttgtttgtagctgtcattatg
gacaattttgattacctcactcgcgattggtcaatcctcggcccccatcacctggatgag
ttcaagaagatctgggcagagtatgaccctgaagcaacgggacgaatcaaacatctggat
gtagtaactctcctgcggaggattcagccaccgttgggttttggtaaattctgtccacac
cgctcagcgtgtaagcgactgatttccatgaacatgccgctgaacagtgacggcacagtg
accttcaacgccacactcttcgcactggtcagaaccgctttgaaaatcaaaacagaagga
aactttgagcaggccaatgaggaactgagagccatcattaagtcaatctggaagaggacc
agtatgaagttattggaccaggtcattccccccattggagaggatgaagtcactgttgga
aagttctacgcaaccttcctgattcaggaacacttccgcaagtttatgcagcggcaggag
gaatactacggttacaggcctaccaagaagaacgctgatgagattaaggcaggtctgcgc
agcattgaggaggaagcagcacctgagctgcacagggccatctcaggtgacctgatcgct
gaggatgagatggagcgtgacttggaggccggagaggagggcatctacaggcggacagga
ggcctgtttggactcaacacagaccccttctcctctgagcccaacagccccctctccaca
caggtgaccagccagaggcccctgcagtttgtggagacacgtctggaggatatagactca
cctccagactccgtcttcctcccaaacactgagttcttccctgataacatgccaacaaca
tccaacaccaataacaatgccaactttgttgaagatatgtcatccaggtttacgtttgaa
aacgagtcactgtcagctgctgcaaccagaaactattcgtatgaggacataagagactca
agttcatatgtgggtggggcctcaagtgttgataacagacggctgtcagatttcactgtg
aggaccaatatcacacagttcccctatgacccatcatatgggccatccaagaaccagaca
gcagcaacagaagcttcaccagccaccaacaaactcattcagcaggcactgagagacggt
ggtctagactccttggctgaggacccacagtttgtatcagtgactaggaaggagctggca
gaagccattaatattggcatgaaggatatggagggcatggctcagggtattgtaaatggg
cagagcggcaaggtaacaaaacgtaaacgccgtcccatcccagttccaccagacaccatg
tcatccaaacccaaggagagcactagtgccgtgtag
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