Carassius gibelio (silver crucian carp): 127964088
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Entry
127964088 CDS
T08819
Name
(RefSeq) TNF receptor-associated factor 1
KO
K03172
TNF receptor-associated factor 1
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04210
Apoptosis
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
127964088
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Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
TRAF_BIRC3_bd
zf-TRAF
TRAF2_zf
TRAF3_RING
Sina_ZnF
zf-C3HC4
CFAP161
zf-C3HC4_4
Tropomyosin
CCDC39
zf-TRAF_2
zf_C2H2_ZNF598
DUF5798
IFT20
CENP-F_leu_zip
P4Ha_N
Rab11-FIP3
Motif
Other DBs
NCBI-GeneID:
127964088
NCBI-ProteinID:
XP_052420213
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Position
B8:complement(7533469..7545232)
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AA seq
557 aa
AA seq
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MRGNPVVFFYPVSDPSLNGVSSTPGENEYPSGFPQSICDEVPKEKYLCSNCNNVLNKARQ
TVCGHRYCLACVNWLVRNNKDLVCTKCKEEDPSFENDTSVLTLDQFFNDAAINKEILDLK
VHCANQGCPWRSTLKNFEDHQSQCEYALIPCNIGCGLMVQRKSLATHLERGCPNNKTTCP
SCSGVLTPRELQKHVCPSSGDKKTTKTDKRQKNNHPSSSKKKEPCIFSDVGCPFKGNADK
VKEHESCSHVGHLQLLLDVTRALQRTLNSSAERSHHESPDLLQPGQCGASHISQSEGEIE
SDGGDPGVSDKALSLHDDQAELAVGQQLDALQQRVQVLENIISALNREVEKTQISVVALE
RDNYNSQHLIQHLETKVAEQQQRLVRKDIQISSLQQCISAQQDISYDGTFLWRLCDVSQS
LREAASGEKISQYSPAFYTARYGFKVRMRLYLNGDGVGKGTHISLFFVIMKGEYDAILSW
PFRHKVTFFLIDQNQREHVIDAFRPDLSSASFHRPVSEMNVASGCPLFFPLGKMRSTKHA
YCKDDTIYIKCVVDTSS
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgagggggaaccccgtggtgtttttctaccctgtttcagacccgtcgttaaacggggtt
tcgtccacaccgggtgagaacgagtacccgtcgggtttccctcagagcatctgcgatgaa
gtcccgaaggagaagtacttgtgcagcaactgtaataatgtgttgaataaagcgcgtcaa
accgtgtgcggtcaccgctactgcctcgcgtgcgtcaactggctggtcagaaacaacaag
gatcttgtgtgcacaaaatgtaaagaagaagatcccagttttgagaatgacactagcgta
ttgactcttgaccagttcttcaacgatgccgccattaataaggaaattttggatctgaaa
gttcactgtgccaaccaaggctgcccctggagaagcaccctgaagaactttgaggaccat
cagagtcagtgtgaatatgccctgatcccttgcaacattggctgtggcttaatggtgcag
aggaaatcactggctacacatctggagagaggctgtcccaacaacaagaccacatgtcct
tcttgttcaggtgtcctgacaccgagagagctccagaagcatgtttgtcccagttcaggt
gataagaagacgacgaagacagataaacgacaaaagaataatcacccaagcagctcaaaa
aagaaggagccatgcattttctcagacgttggttgtccttttaagggcaatgcggacaaa
gtaaaagagcatgaatcctgcagccatgttggccatctacagcttctcttggatgtgacc
agagctcttcagcgtaccttgaattcttcagctgagcgaagccaccatgaaagccctgat
cttcttcagcctggacagtgtggtgcttcccacatttctcagagcgagggtgagattgag
agcgacggaggggatccaggagtgagtgataaggccctcagtctccacgacgatcaggct
gaacttgctgtaggccagcaactggacgctctacagcagagagtgcaggttctggagaac
atcatctcagctttgaaccgagaagtggagaagacgcagatcagtgttgttgcgctggag
agggacaattacaacagtcaacacctcattcagcacttggaaaccaaggtagcggaacag
cagcagagactggtcaggaaagacattcagatcagttcattgcagcagtgtatcagcgcc
cagcaggacatctcgtatgatggcaccttcctctggcggttgtgtgatgtcagccagagc
ctgagagaggctgccagcggcgaaaagatcagtcagtactcgccagcgttctacactgcc
aggtatggatttaaggtgcgcatgcggctctacttgaacggagatggggttggaaaggga
acacacatctcgcttttctttgttataatgaaaggagaatacgacgccattctttcatgg
ccattcagacacaaggtcacattctttctcatagatcagaaccagagggagcacgtcatc
gacgctttccgtccagacctctcctctgcatctttccaccgccccgtctcagagatgaat
gtggccagcgggtgccccctgttcttccctctggggaaaatgaggtcgactaagcatgcg
tactgcaaggatgacaccatctatatcaagtgtgtggtggacacctcctcctga
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