Carassius gibelio (silver crucian carp): 127964706
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Entry
127964706 CDS
T08819
Name
(RefSeq) tripartite motif-containing 13-like isoform X1
KO
K12003
tripartite motif-containing protein 13 [EC:
2.3.2.27
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgib04131
]
127964706
04121 Ubiquitin system [BR:
cgib04121
]
127964706
Enzymes [BR:
cgib01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127964706
Membrane trafficking [BR:
cgib04131
]
Autophagy
ER-phagy
Other ER-phagy associated proteins
127964706
Ubiquitin system [BR:
cgib04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
127964706
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-B_box
zf-RING_UBOX
zf-C3HC4
zf-RING_2
zf-RING_5
TRIM_CC
zf-C3HC4_2
zf-C3HC4_4
zf-C3HC4_3
RING_XB3-XBAT31
zf-Nse
Rab11-FIP3
PDV_N
Dynamin-like_hel_bact
DLP_helical
Motif
Other DBs
NCBI-GeneID:
127964706
NCBI-ProteinID:
XP_052420948
LinkDB
All DBs
Position
B9:complement(12867590..12874477)
Genome browser
AA seq
416 aa
AA seq
DB search
MHEIDACQDDDTMELLEEDLTCPICCCLFEDPRVLPCSHSFCKKCLEGILDGNRSPAWRP
PFKCPTCRKETVHNGIASLQVNYSLRGIVEKYNRIRVMPTMSLCRVHSGQPLNIFCATDL
KLICGFCATTGDHKGHTFCALEEAYEREKLAFEELFRVVEGWRGEEVHSCLESLEGAKRK
ALERVSRDADRVSEYFEKVLCTLEHKRSEILSDFETLKLAVMQTFDPEINQLRSALEEQQ
RALSIAESFRSLSDPLTFLQQMQDFREKLRVIQGTPLPSRTDVDVGLRGLQSFDVKEWDR
MRLGEVDKLCAPYESSTYLASLPPAAAPRYSRVLWRVVLVVCACFTALNFLPSDCLALSI
QDKVVALSGLSLPCPGEIVRWLGFCWKEAEAICTLITELCRNCILDLINTTSDFLS
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgcacgagatagacgcttgccaagatgatgatacgatggagctcttggaggaggacctc
acatgcccaatatgctgctgtcttttcgaggatccgcgtgtcctgccgtgctctcacagc
ttctgcaagaagtgtctggagggcatcctggacggtaaccggagccctgcttggagacca
ccgttcaaatgtccgacctgtcgaaaggagaccgtgcacaacggcatcgcgagcttgcaa
gtcaattactccctgcgtggcatcgtggagaagtacaacaggattcgagtgatgccgacg
atgtctctctgccgagttcacagcggacagccgctcaacatcttctgcgccacggatctg
aagctcatctgtggcttctgcgccacgacaggtgatcataaaggacacacgttttgcgcc
ctggaggaggcgtatgaacgcgagaagctcgcgtttgaggagttgtttcgtgtcgtggag
ggctggaggggcgaggaggtgcattcgtgcctggaatcgttagaaggagcgaagaggaaa
gcactggagagggtctcgcgggacgcggatcgagtctcagagtactttgaaaaagtttta
tgcacgctggagcacaaacggagcgagatcctctcggactttgagaccctgaagctcgcg
gtcatgcagacctttgaccctgagatcaaccagctccgctcggcgctcgaggagcagcag
cgtgcgctcagcatcgccgaatccttccggtcgctctccgacccgctgactttcctccag
caaatgcaggacttcagagaaaagctgcgcgtcattcagggaacgccgctgccgtctcgg
acggacgtggacgtggggttgcgtggcctgcagagcttcgatgtgaaggaatgggaccgg
atgcgtcttggagaggtggacaagctgtgtgccccttacgagagcagcacctacctggct
tcgctgccccctgccgcagctccgcgctactcccgggtgctgtggagagttgttctggtt
gtatgtgcgtgtttcacagcgctgaactttctcccgtcggactgtctcgctctgagcatc
caggataaggtggtcgcactcagtggcctttctctgccctgtcctggagagattgtgcgc
tggcttggcttctgctggaaagaagcggaagcgatctgcacgctaataaccgagctgtgt
cggaactgtatcttggacctgataaacacaacatcagatttcctcagctga
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integrated database retrieval system
