Carassius gibelio (silver crucian carp): 127965566
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Entry
127965566 CDS
T08819
Name
(RefSeq) sodium channel protein type 1 subunit alpha-like
KO
K04834
voltage-gated sodium channel type II alpha
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cgib04040
]
127965566
Ion channels [BR:
cgib04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
127965566
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
PKD_channel
GPHH
ATP-synt_B
T3SS_ATPase_C
IQ
Motif
Other DBs
NCBI-GeneID:
127965566
NCBI-ProteinID:
XP_052422350
LinkDB
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Position
B9:complement(27160440..27206358)
Genome browser
AA seq
1962 aa
AA seq
DB search
MAHSFTPPGPKSFHKFTRESLKAIESRIAEENARKSKDKQERNKDDECRRKPNSGLETGK
NLPFIYGDVPRGLVSTPLEDLDQFYSNRATFIVVDKKKTIIRFNATPALYIFSPFNPLRR
ISVKILVHSLFSMFIMFTILANCAFMVYSNTPDWAKNVEYAFTGIYTFEALIKIIARGFC
VGQFTFLRDPWNWLDFMVIVMAYLTEFVDLGNVSALRAFRVLRALKTISVIPGLKTIVGA
LIQSVKKLSDVMILTLFCLSVFALVGLQLFMGVLKHKCVLRPSDYNISRCILKETEDCYT
MDDYNNYINNQSNQYFQSGKKDAMICGKSSDAGQCPDNYLCTKAGPNPDYGYTSFDSFGW
AFLALFRLMTQDYWENLYQQTLRAAGKIYMIFFVLVIFLGSFYLVNLILAVVAMAYDEQN
QATIDEALKKEEEFSAMLQQRRDEEAQAMAELSKCDGLSGEKTDSSSDASKLSSKSAKER
RNRRKKRQRQGEGEKEEDSNREGTARKASFRLIADGKIRLSHERTYTSPHQSPLSIQGSI
RTPRRDSKGSVFSFRGRVHSENNYADDEQSMCEETGSRRDSLFVPSRSERLYSTLSKSSP
TPRILLPSNGKARYVVDSNGMVIVSCGASSPNSPSGLLTPEMSRKKPTFDDTCFDTDEEY
RRRCDSKSFSRAFPHEQTARQRGLSVASGSNNTADLSEVLKQKCVECWFEFAESYLIWDC
SPTWLKIKKVVNMVMMDPFADLFITICIVINTAFMAMEYHPMDATFIKVLTTANVVFIAI
FTAEMIFKIVALDPYTYFQEGWNIFDSIIVTLSLLELCLPGIGFLRPFRLLRVFKLAKSW
PTLNMLIKIIGNSLGALSNLTLVLAIIVFIFAVVGMQLFGKNYRDCVCKISEDCTLPRWH
MSDFFHSFLIVFRVLCGEWIETMWDCMEVSGTQLCLIVYMMVMVIGNLVVLNLFLALLLS
SFSADNLAAPGEDIEKNNLQIAVGRIKKGFAVVKACLQNFFRSGCIRKQKPKKKTIDGSI
ILRNCKKINSDHTSLELVKGIGSTDMDSDTEDFISNPSLTVSVPIAVEESDFECLNTEDF
SSLSSDLDDKEKLSDVAPSSSEGSTVDLRHFGKDGEDALDSELEESTDPEACFTPGCVQK
FPCCQVDAEKGMWKKWWLLRQTCYNIVEHSWFESFIILMILLSSGALAFEDIYLNSRKTI
KTILEFADKVFTYIFILEMLLKWVAYGFAKYFTNLWCWLDFIIVDVSLISLVANALDYSE
LGAIKSLRTLRAFRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIVGVNY
FAGKFYECVNKTSGKRMSSTDIRNITECLGNPDELEWRNLKINFDNVGNGYLALLQVATF
KGWMPIMYAAVDSRNVDEQPEYEVNLYMYLFFVIFIILGAFFTLNLFIGVIIDNFNQQKK
KFGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPKNKIQGFIFDLVTKQAFDIFIMVLI
SLNMLIMMMETEEQSRNKQTMGVLYWINVGFIVLFTSECVLKMAALRQYFFTVGWNVFDF
IVVILSIVGMFLAEVIKKYFVSPTLFRVIRLARIGRVLRLIRSAKGIRTLLFALMMSLPA
LFNIGLLLFLVMFIYAIFGMSNFAYVKKSAGIDDMFNFETFGNSMLCLFQITTSAGWDGL
LAPMLVTNDSECDPNKTFPGSQVKGDCGNPPIGIFFFVSYIIICFLIVVNMYIAVILENF
SVATEESADPLSEDDFDRFYEVWEKFDPKASQFMDYDKLSDFANSLDPPLRIPKPNRLQL
ISMDLPMVSGERIHCLDILFAFTKRVLGEGGEMDILRGQMEERFMASNPSKSSYEPITTT
LRRKHEDMSAAIIQRAYRSHIVRHSIKKVRNAHRETRQQNGKVPNKESVDDEKCDNNSAW
ENSDATPATSSPLSYDSLTQNATNKYKKDKHEKEVEDKGNGV
NT seq
5889 nt
NT seq
+upstream
nt +downstream
nt
atggcgcattcgtttactccaccaggacctaaaagtttccataagttcacccgtgaatct
cttaaggccatcgagagccggatcgctgaggagaatgccaggaagtccaaggacaagcag
gagagaaataaagatgatgaatgcagacgaaaacccaacagcggcctggagaccgggaaa
aatcttcccttcatatacggagacgttcccagaggactggtgtccacaccactggaggac
ctggaccagttctacagcaatcgggcaacttttatagtagtggacaaaaaaaagacaatc
atccgtttcaacgccactcctgccttgtacatcttcagtcccttcaaccctctgagaaga
atctcagttaagattttggtgcattcattgttcagtatgtttataatgttcactatactg
gcaaactgcgctttcatggtctactcaaatactccagactgggccaagaacgtagagtat
gccttcactgggatatacacttttgaagcactcataaagatcatcgctaggggattctgt
gtgggacagtttacgtttctccgagacccgtggaactggttggattttatggttatagtt
atggcatatttaacagagtttgtggatctgggtaatgtgtctgcgctgcgagcgttcaga
gttcttcgagccctgaaaactatatcggtcatcccagggctgaaaacaattgttggagct
ctgatccagtcagtgaagaagctgtcagatgtgatgatcttaacccttttctgcctaagc
gtctttgctttggtcggactgcagcttttcatgggagttcttaaacacaaatgtgtgctc
aggccatccgattacaacataagtcggtgtattcttaaagagacagaggactgttacaca
atggacgactacaacaattacattaataatcagagtaatcagtatttccaatccggaaag
aaagatgctatgatctgtgggaaaagcagtgatgctgggcagtgtccagataattatctc
tgtacaaaagcagggcccaatccagattatggttacacaagctttgactcctttggctgg
gctttccttgctttattcagactgatgactcaagactactgggagaatctttaccaacag
actcttcgggccgcaggaaaaatctacatgattttttttgtgctggtcattttcttggga
tccttctacctggtgaatctgatcctggctgtggttgccatggcatatgatgaacaaaat
caggccactattgatgaggctttgaagaaagaggaggagtttagtgccatgctccagcag
agacgtgacgaggaagctcaggccatggctgaactgtccaagtgtgatgggctgagcgga
gaaaagacagactcttcctcggatgcctctaaactcagttccaaaagtgccaaagaaaga
cgcaaccgcaggaaaaagagacagcgtcagggggaaggcgagaaagaggaggattccaac
agggaggggactgctagaaaggccagcttccgtttgattgctgatggaaaaatccggctc
tcacatgaaaggacttacacgtctccacatcagtcccccctgagtattcagggctcaatc
cgcaccccacgccgggacagcaaaggtagcgtcttcagcttccgcgggcgtgtgcattca
gaaaacaactatgctgacgacgagcaaagcatgtgtgaggaaacgggcagccggagagac
tctctgtttgtaccctctcgatccgagcggctttacagcactcttagcaaaagcagcccg
actccacgtatactgttaccctctaacggaaaagcacggtacgtggtcgacagcaatggc
atggtgatagtgtcatgtggagcgtcttcacccaactcaccctctggattactgacgccg
gagatgtccagaaaaaaacccacgtttgacgacacatgctttgacacagatgaagaatat
cgacgcagatgtgattcaaagagcttttcaagggcttttccacatgagcaaacagcgaga
cagcgaggattgagcgtagcaagtggcagcaacaacactgctgacctgtcggaggtcttg
aaacagaagtgtgtggagtgctggttcgagtttgcagagagttatctgatctgggattgc
agtcccacatggctgaagataaagaaagttgtcaacatggttatgatggacccctttgcg
gatctgtttatcaccatttgcatcgtgataaacaccgcattcatggccatggagtatcac
cccatggatgccacctttattaaagtgctcacaaccgccaatgtggttttcatagccatc
tttacagcagaaatgatattcaagatcgttgcgttggacccgtacacttactttcaggaa
ggctggaatatcttcgacagcatcatagttacgttgagtctcctggaactttgtttgcct
ggaatcggctttcttaggccattcagattgctaagagtcttcaaactagctaagtcttgg
ccgactctgaacatgctgatcaagatcattggtaactctcttggcgccttgagcaaccta
acgcttgtgctggccatcatcgtcttcatcttcgctgtggtgggcatgcaactgtttggg
aagaactaccgtgactgtgtgtgtaagatttctgaggattgcacgcttcctcgctggcac
atgagcgatttcttccactcgttcctgatcgtcttcagggttttgtgtggagagtggatc
gagaccatgtgggactgcatggaagtgtcaggaacgcaattgtgcttgattgtgtacatg
atggtcatggtgattggaaatctggtggttttgaacctgttcctcgctctgctgctcagc
tcattcagtgccgacaacctcgcagcccccggagaagatattgaaaagaacaacctgcag
atagcggttggtcgaatcaagaaaggttttgctgtagtcaaggcctgccttcagaatttc
ttccggagtggctgtataagaaagcagaagccaaaaaagaaaaccatagatgggagcata
attttgagaaactgcaagaaaataaactccgaccacacctcactagagctggttaaaggc
atcggaagtacggacatggatagtgacacagaggattttatcagcaacccaagcttgacc
gtcagtgtcccgatcgctgtcgaggagtcagactttgagtgcctcaacactgaggatttc
agtagcctttcttcagacctagatgataaagagaagctgtctgacgtggctcccagctct
tcggagggcagcacggtggacctcagacactttggtaaagatggagaagatgctttggac
tctgaacttgaggaatctacggatccagaagcctgtttcacaccagggtgtgtccagaag
ttcccgtgctgccaggtggatgcagaaaagggcatgtggaagaaatggtggctgctgaga
cagacgtgctataacatcgtggagcacagctggtttgagagcttcatcatcctcatgatt
ctgctcagcagtggcgctctggcatttgaggacatttaccttaattcgaggaagaccata
aagaccatcttggaatttgctgataaagtgttcacctacatcttcattctggagatgctg
ctgaaatgggtcgcctatggttttgccaaatacttcaccaatctctggtgctggctggat
tttattattgttgatgtctctctgatcagcctggtggccaacgccctggattattcagag
ctgggcgccatcaaatctctccgaaccctgagagccttccgaccgctccgagccctctca
cgctttgagggaatgagggtggttgtgaacgctcttctgggcgccatcccctccatcatg
aacgtcctgctggtctgcctcatcttctggctcatttttagcatcgtgggcgtcaactac
ttcgccgggaagttttacgaatgtgtaaacaaaacctcgggaaagcgaatgtcttccaca
gatatccgtaatataacggagtgtctcggaaaccccgatgaactcgaatggagaaatttg
aagattaactttgacaatgtaggaaatggatacctggccctgctacaagtggccactttt
aaagggtggatgcccattatgtatgcagcggtagactctcgcaatgtagatgagcaacca
gagtatgaggtgaatctgtatatgtacctcttttttgtcatcttcatcatccttggagct
tttttcacattaaatctcttcattggcgtcatcattgacaacttcaatcagcagaagaaa
aagtttgggggtcaagacattttcatgacagaagagcaaaagaaatactacaacgctatg
aagaagctaggctcaaaaaaacctcaaaaacccattccaaggccaaaaaacaagattcaa
ggattcatctttgacctcgtaaccaaacaggcatttgacattttcattatggtccttatc
tcgctcaatatgctcattatgatgatggagacggaagagcagtcaaggaataaacaaacg
atgggagtgctgtactggatcaatgttggtttcattgtgctcttcaccagcgaatgtgtg
ctaaagatggctgcgctacgacagtacttttttaccgtcggctggaatgtattcgacttt
atcgtggtcatcctgtctatagttggcatgttcctggcagaagtcattaagaagtatttt
gtctcacccaccctgtttcgcgtcattcgcctcgcccggatcggccgtgtgctacgtctt
atccgaagtgccaagggaatacggacccttctgtttgcgttgatgatgtcacttcctgcc
cttttcaacatcggtcttctcctcttccttgtcatgttcatctacgccatcttcggcatg
tccaacttcgcctacgtcaaaaaatcggccggcattgacgacatgttcaacttcgagacg
tttggcaacagcatgttgtgtttgtttcagatcaccacctcggcaggctgggacggcctt
ctggcaccaatgttagttaccaatgattccgaatgcgacccgaataaaaccttccccggc
agccaggttaaaggcgactgcgggaacccgcccatcgggattttcttcttcgtcagctac
atcatcatatgcttcctgatcgttgtgaacatgtacatcgccgtcatcctggagaacttc
agcgtggccacggaggagagcgccgaccccttgagcgaagacgacttcgataggttttac
gaggtttgggaaaagttcgacccgaaagcctcgcagttcatggattacgacaagttgtca
gacttcgccaattctctggatccacctctgcgaatccccaagcccaaccgcctgcagctg
atctccatggatctgccgatggtgagcggcgaacgcatccactgtctggatatcttgttc
gctttcaccaaacgggttctcggggaaggcggcgagatggacatccttcgcggacaaatg
gaagagaggttcatggcctccaacccctcgaagtcctcttacgagcccatcaccacaacc
ctgcgcaggaagcatgaagatatgtctgctgcaatcatccagagagcctataggagccac
atcgtccgacatagtataaagaaggtccgtaatgcacacagagagaccaggcagcaaaac
gggaaggtcccgaataaagagtctgttgacgatgaaaagtgcgataataacagcgcttgg
gaaaactctgatgcaacgcccgccacgtcctctccgctgtcgtatgatagcctgacgcag
aatgccacaaacaaatacaagaaggacaaacatgagaaggaagtggaagacaaaggaaac
ggcgtttag
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