Carassius gibelio (silver crucian carp): 127966606
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Entry
127966606 CDS
T08819
Name
(RefSeq) short transient receptor potential channel 4a
KO
K04967
transient receptor potential cation channel subfamily C member 4
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cgib04040
]
127966606
Ion channels [BR:
cgib04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
127966606
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
TRP_2
Ank_2
Ank
Ank_4
Ank_3
PKD_channel
Ank_5
YVC1_C
BAR_4
Motif
Other DBs
NCBI-GeneID:
127966606
NCBI-ProteinID:
XP_052423673
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All DBs
Position
B10:complement(14229683..14244084)
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AA seq
915 aa
AA seq
DB search
MSQLYFRRTDNFSYRDRIPLRIVRAESELSPLEKAYLFAVEKGDYASVKQALIEAEIYFK
ININCIDPLGRTALLIAIENENLEIIELLLSFNVYVGDALLHAIRKEVVGAVELLLNHKK
PSGGMQVPPILLDKQFSDFTPDITPIILAAHTNNYEIIKMLVQKGVSMPQPHQVRCNCME
CVSSSDVDSLRHSRSRLNIYRALASPSLIALSSEDPFLTAFQLSWELQELSEVENEFKSE
YEELSQQCKQFAKDLLDQTRSSRELELILNYRDDMNLLEDEGNNDLARLKLAIKYHQKEF
VAQPNCQQLLASRWYDEFSGWRRRHWASKFITCMFIGFLSPFFSLLYLIAPKSQYGLFIR
KPFIKFICHTASYLTFLFLLLLASQHVDRKDSQFTKQGPEPTTVEWMILPWVLGFVWAEI
KQMWDGGFQDYIHDWWNLMDFVMNSLYLATISLKFVTYFKWSEDYKQWKAWQMWHPALVG
EALFAIANIFSSLRLISLFTANSHLGPLQISLGRMLLDILKFLFIYCLVLLAFANGLNQL
YFYYETDGKVTNNNVTCKGIRCSEQNNAFTTMFETLQSLFWSIFGLVALYVTNVDADHKF
TEFVGATMFGTYNIISLVVLLNMLIAMMNNSYQHIADHADIEWKFARTKLWMSYFEEGGT
LPPPFNIIPSPKSGWYFIRWIKTHCFNIKHRKRTETFGSLGMRAAENVRTNRQYQEVLRN
LVKRYVAAMIRDAKKEAGLTEENFKELKQDISSFRYEVMGMVKGTKSGVSNSKGHTRASN
LVYPDKPLKCNSTSDGRQLKGKMRLQNIATSVIQEGGPKANPWKPGGLSGLADGLISKDT
VKNQMHCKGPSNPGEIYSVSEEAGESESEEQDDVEQGENENQNNETEKDGRNEALQEDDE
MSYMRYMCNEEMEEN
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atgtcacagctctactttcgcagaacggataacttctcatacagggacaggatccctctg
cggatagttcgagccgagtctgaactgtcaccgctggaaaaggcctacctgtttgctgtg
gagaaaggtgactacgccagcgtcaaacaagctctgatagaagccgagatctacttcaaa
atcaacatcaactgcatcgaccctttgggacggacagctctgttgattgccattgagaat
gagaacctggaaattattgagttgctgctcagctttaacgtgtacgtgggggatgcgctt
ttacatgccatacgaaaggaagtggtgggggctgtggagctgcttttgaatcataaaaag
cccagtgggggcatgcaggtgcctcctatcctgttggataaacagttctccgattttacc
cctgacataacacccatcatcttggccgctcacaccaacaactatgagatcatcaagatg
ctggttcagaagggtgtgtccatgccccagccccaccaggtgcgctgcaactgcatggaa
tgcgtgtccagctcagacgtggacagcctgcgacattcccgatcccgtctcaacatctac
cgggccctggccagtccctcgctcatcgccctctccagcgaagaccccttcctgactgca
ttccagctcagctgggagctccaggagctcagcgaagtggagaatgaattcaagtccgag
tatgaagagctttcccagcagtgcaagcagttcgccaaagatctgcttgaccaaacgcgc
agctccagagagctggaactgattctgaactatagggatgatatgaatctcctggaggat
gaagggaataatgatctcgccaggttgaaactggctatcaagtaccaccagaaagagttt
gtagcacagccaaactgtcagcagctgctcgcatctcgctggtatgatgagttctcaggc
tggagacgccgccattgggccagcaagttcatcacctgcatgttcatcggattcctctcc
cctttcttttcgctgctctacctgattgctcccaagagccaatatggcctcttcatccgg
aaacccttcattaagtttatatgccacactgcttcctatctgactttcctctttctcctg
ctgttggcctcccaacacgtggaccgcaaggacagtcagttcaccaagcaaggtccagag
cccaccactgtggaatggatgatcctaccctgggttttaggatttgtatgggctgagatc
aaacaaatgtgggacggtggctttcaggattacattcacgactggtggaacctcatggac
tttgtaatgaattccctgtatctggccaccatctcattgaagttcgtcacttactttaag
tggtctgaagactacaagcagtggaaggcatggcagatgtggcaccccgccttggtgggc
gaggctttgttcgccattgctaacatatttagctccctgcgactgatttcactcttcaca
gccaactcgcacctgggcccccttcagatctcccttggccgaatgctgctggacatcctc
aaattcctcttcatttactgcctggtgctactcgcatttgcaaatggactcaatcaactg
tatttctattatgaaactgatggcaaagtgactaataacaatgtcacatgcaagggtatc
cgctgctcagagcagaacaatgcattcaccacaatgtttgagacattgcagtctttgttc
tggtctatatttggtcttgttgccctgtatgtgaccaatgttgacgccgaccacaaattc
actgaatttgttggagccacaatgtttgggacctacaacatcatctctctggtggtgctt
cttaatatgctcattgccatgatgaataattcctaccaacatattgctgaccatgctgat
attgagtggaagtttgccagaacgaaactttggatgagctactttgaggagggcggcacg
ctgcctcctcccttcaacatcattccaagtccaaaatcaggatggtacttcatcagatgg
atcaagacccactgcttcaatattaaacacagaaaaagaacagagacgtttggatcactt
gggatgcgtgctgctgaaaacgtccgcacaaaccgccagtaccaggaggtgcttagaaat
ctggttaagcggtatgtggcagcaatgattagggatgccaaaaaagaagcaggattaact
gaggagaactttaaggaacttaaacaggatatctcaagcttccgttacgaggtgatggga
atggtgaagggcactaagagtggtgtatcaaactcaaaagggcacacaagagcttcaaac
ctagtgtatcctgataagcctctaaagtgcaattctacttcagatggaagacaactaaaa
ggcaaaatgagactgcagaacatcgccacctctgtgatccaggagggtggacccaaagcc
aacccctggaagcctggcggcttaagtggcttagcagatggtctcatctcaaaagatact
gttaagaatcaaatgcactgcaaagggccaagcaacccaggagagatttactccgtgtca
gaagaagctggagaatctgaaagtgaagaacaggatgacgtcgaacagggagaaaacgag
aaccaaaacaatgaaacagagaaggacggaaggaatgaggctttgcaagaggatgatgaa
atgtcatatatgcgttatatgtgtaatgaagagatggaggaaaactaa
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