Carassius gibelio (silver crucian carp): 127969903
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Entry
127969903 CDS
T08819
Name
(RefSeq) calpain-1 catalytic subunit-like isoform X1
KO
K01367
calpain-1 [EC:
3.4.22.52
]
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04141
Protein processing in endoplasmic reticulum
cgib04210
Apoptosis
cgib04217
Necroptosis
cgib04218
Cellular senescence
cgib04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
127969903
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
127969903
04217 Necroptosis
127969903
04218 Cellular senescence
127969903
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
127969903
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cgib01002
]
127969903
Enzymes [BR:
cgib01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.52 calpain-1
127969903
Peptidases and inhibitors [BR:
cgib01002
]
Cysteine peptidases
Family C2: calpain family
127969903
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_6
EF-hand_1
EF-hand_8
EF-hand_7
CAPN13-like_C_EFh
Motif
Other DBs
NCBI-GeneID:
127969903
NCBI-ProteinID:
XP_052428013
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Position
B13:5988868..5998549
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AA seq
704 aa
AA seq
DB search
MFTYGGISAQISANRLQAEGVGSFEQALHFQNQDFEALKQECLEGGYLFEDPCFPAEPPS
LGFKELAPYSSKTRGVEWMRPTELCDDPQFIVGGASRTDICQGALGDCWLLAAIASLTLN
ERLLHRVVPQGQSFQDDYAGIFHFQFWQFGEWVDIVIDDRLPVRDGELMFVHSAEGNEFW
SALVEKAYAKLNGSYEALSGGSTTEGFEDFTGGVSEMYELRKAPRDLYRIISKALERGSL
LGCSIDITSAFDMESVTFKKLVKGHAYSVTALKQVEFRGNTERLIRIRNPWGQVEWTGAW
SDNSPEWDEIDPSEKDDLHLQMEDGEFWMSFSEFLRQFSRLEICNLTPDTLSDDDLSHWN
TIKFHGAWRRGSTAGGCRNNPNTFWINPQYKITLLEEDDDPEDEEVACSFLVALMQKDRR
RYRHHGQDMHTIGFAIYEIPEEYAGCQNVHLKKDFFLNHSSSARSETFINLREVSTRLRL
PPGEYIIVPSTFEPSQEADFVLRVFTEKQSETEELDDEISADLEDEAEITEDDIDDSFKS
LFAQLAGEDMEISVRELRTILNRVVSKHKDLKTDGFSMESCRTMVNLLDKDGSARLGLVE
FQILWNKVRKLLGIFREFDIDQSGTMSSYEMRMAVESAGFKLNNRLNQILVARYAENEVI
DFDNFVCCLIKLETMFRTFQQLDMDGTGTAEMNLSEWLFMTMCG
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgttcacatatggaggaatctcggcacagatcagtgctaacaggctacaggcagaaggt
gtgggctcttttgagcaggccttacacttccagaaccaggactttgaggcactcaaacag
gagtgtttggaaggaggctacctgtttgaagacccctgcttccctgccgaaccaccctct
ctcggcttcaaagaacttgccccttattcctctaaaacccgtggtgtggagtggatgcgc
cctacggagctctgtgatgatcctcagttcattgtgggtggagcctctcggacagacatc
tgtcaaggagctctgggtgactgctggctcctcgctgctatagcctcgctgactcttaat
gaaagactcctccacagggtcgtccctcaaggccagagctttcaggatgactatgctgga
atcttccactttcagttctggcagtttggtgagtgggtcgacatcgtgattgatgaccgg
ctcccggtgagagacggagagctcatgtttgtccattcagcagagggaaatgagttctgg
agtgccttggttgaaaaagcctatgctaagctaaatggctcctatgaggctctctctgga
ggatccactactgaaggttttgaggatttcaccggaggggtttcagagatgtacgagctc
cggaaggctccgagagacctgtaccgaatcatcagcaaagccctggagagaggctccctg
ctgggctgctctattgatatcaccagtgcctttgacatggagtctgtgacgttcaagaag
ctggttaagggtcatgcttactcagtgacggctctcaaacaggtggaatttaggggtaat
acagaaaggctaatccgcatccgtaacccatggggtcaggtcgaatggacgggggcctgg
agcgacaactctcctgaatgggatgaaattgatccatctgagaaggacgacttgcactta
caaatggaggatggagagttctggatgtcgttcagtgagtttttgcggcagttctccagg
ctggagatttgtaatctgacccctgatactctgagtgatgatgacctgagccactggaac
accatcaagtttcacggtgcctggcggagaggcagtaccgcgggaggctgccgaaacaac
cccaacacattctggatcaatccacagtataagatcacattgctggaggaagacgatgac
ccagaggatgaagaagtggcctgcagtttcctggtggctttaatgcagaaagaccgcaga
cggtaccgccaccacggacaggacatgcacaccatcggctttgctatctacgagattcct
gaagagtatgccggctgtcagaacgttcacctcaaaaaggacttcttcctaaaccactca
tcgtctgcccgctctgagaccttcatcaacctgcgggaggtgagcactcgtctccgcctg
cctcccggtgaatacatcatcgtcccctccaccttcgaacccagccaggaggctgatttc
gtcctacgagtcttcaccgaaaagcagtcagagacggaggagttggatgacgagatatca
gctgacctggaggatgaggcagagattacagaagatgatattgatgactctttcaagtcc
ttgtttgcccagctggctggagaggatatggagatatctgtccgtgaactcagaactatt
ctcaacagagtagtttccaaacacaaggatctaaagacagatggcttcagcatggagtcc
tgcagaactatggtaaacctcttggataaagatggtagtgcgcggttgggtttagtagag
ttccagatcctctggaacaaagtaaggaagttgctggggatcttcagagagtttgatatt
gatcaatcaggaactatgagttcttatgagatgcgtatggctgtagaatcagcaggcttt
aagctcaataacagactcaaccagattcttgtagccagatacgctgagaacgaggtcatc
gattttgataacttcgtctgctgcttgatcaaactggaaactatgttcaggacctttcag
cagttggacatggatggaacaggaacggctgagatgaacctatctgagtggctcttcatg
accatgtgtggttga
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