KEGG   Carassius gibelio (silver crucian carp): 127975052
Entry
127975052         CDS       T08819                                 
Name
(RefSeq) cytoplasmic dynein 1 intermediate chain 1 isoform X1
  KO
K10415  dynein cytoplasmic 1 intermediate chain
Organism
cgib  Carassius gibelio (silver crucian carp)
Pathway
cgib04145  Phagosome
cgib04814  Motor proteins
cgib05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:cgib00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    127975052
  09142 Cell motility
   04814 Motor proteins
    127975052
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    127975052
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:cgib03036]
    127975052
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:cgib04812]
    127975052
Chromosome and associated proteins [BR:cgib03036]
 Eukaryotic type
  Centromeric chromatin formation proteins
   SAC (spindle assembly checkpoint) factors
    Motor proteins
     Dynein complex
      127975052
Cytoskeleton proteins [BR:cgib04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Dyneins
     127975052
SSDB
Motif
Pfam: WD40_CDC20-Fz Beta-prop_THOC3 WD40_Prp19 Beta-prop_EML Dynein_IC2 Beta-prop_WDR5 WDR55 WD40 Beta-prop_WDR3_1st Beta-prop_WDR36-Utp21_1st Beta-prop_RIG_2nd Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR19_1st Beta-prop_TEP1_2nd Beta-prop_WDR3_2nd Beta-prop_HPS5 Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_SPT8
Other DBs
NCBI-GeneID: 127975052
NCBI-ProteinID: XP_052434759
LinkDB
Position
B16:18183794..18194180
AA seq 645 aa
MADRSDLKAELERKKQRLAQIREEKKRKEEERKKKESEMLQRAENVSEDSDLDRKRRETE
ALLQSIGISPEPPLVQPLQLLTWDTCYFHYLVPTPMSPSSQSVSPPSETGSQESIDGGTV
GRTLQWDTDPSALQLLADSVHGSRMQRLGASKIVQIDFMPKEQVTYSKETQTPVASDQPE
EEEDEELSVTKTESVPQQLEEENTQEAEEDQPRELTNEEKEQIIHSEDFLFFFNRSISVM
ERVLAEDTDIFFDYSGRDMEDKEGDMQAGSNLSFNRHFYDEHWSKHRVVTSLDWSPQYPE
LLVASYNTNEDAPHEPDGVVLVWNMKFKKTTPEYIFHCQSSVMSVGFAQFHPNLVIGGTY
SGQIALWDNRSHRRTPVQRTPLSATAHTHPVYCVNVVGTQNANNLITVSTDGKMCSWSLD
MLSQPQESMELIYNKSKPVAVTCMAFPASDVNNYVVGSEEGTVYTASRHGSKAGIGEMFD
GHQGPVTGISCHNAVGPVDFSHLFTTSSFDWTVKLWSTKHNKPLYSFEDNADYVYDVMWS
PVHPALFATVDGNGRLDLWNLNNYTEVPSASVTVEGGCALNRVRWASGGREVAVGDSEGR
VWIYDVGEQLAVSHTDDWSKFARTLMEIRANQGDGEEEGALELPA
NT seq 1938 nt   +upstreamnt  +downstreamnt
atggctgatagaagtgacctgaaagctgagcttgagcgtaaaaagcagcgcttagcccag
attcgagaggagaaaaaaagaaaggaggaagagagaaagaaaaaagagtctgagatgctt
cagagggccgagaatgtgtcagaagactcggaccttgacagaaagaggagagagacagag
gcgctcctgcagagcattggaatttcaccagaaccacctttagtgcagccactgcagctt
ttaacatgggatacctgttattttcattatttagtcccaacccctatgtctccctcttcg
caatcagtgagcccacccagtgaaactggaagtcaggagtccatagatggagggacggtg
ggaaggacgttacagtgggacaccgacccctcagctcttcagctgcttgcagattcagtt
catgggagcaggatgcaaaggcttggtgcatcaaaaattgttcagattgatttcatgcca
aaagaacaggtgacatactctaaagagacacagactcctgtggcatctgatcagcctgaa
gaagaggaggatgaggagctgtcagtgaccaaaactgaatctgtgccacagcagctggag
gaggaaaacactcaggaagccgaagaagatcaaccaagagaactgaccaacgaggagaaa
gagcagattattcattcagaggatttcctgtttttcttcaaccgaagcattagtgtaatg
gagcgtgtgctggccgaggatactgacattttctttgactacagtgggcgagatatggag
gacaaagaaggggacatgcaagccggatcaaacttgtcttttaatcgacatttctatgat
gagcattggtccaaacacagggtcgtcacttccttggattggtcaccacagtatcctgaa
ttgctagtggcctcatacaacactaatgaggatgcacctcatgagccagatggagttgtg
ctggtctggaatatgaagtttaagaagacgacccccgagtacatattccactgtcagtcc
tcagtgatgtcagttggctttgctcagtttcatcccaacttggtgattggcggcacttac
tctggacagatagcactgtgggacaatcgaagtcacaggaggaccccagtgcaacggacg
cccttgtctgcaactgcacacactcatcctgtatactgtgtgaatgtggtcggaacgcaa
aatgccaacaacttgatcacagtatccacagatggcaagatgtgctcctggagtctggac
atgctctcgcagcctcaggagagtatggagctgatctataataagtcaaagccggtggcc
gtcacttgtatggccttccctgcaagtgatgtgaataactatgtggtaggaagtgaggaa
ggcaccgtttacacagcatcccgccatggaagtaaggctggtattggtgaaatgtttgat
gggcatcagggtcctgtgactggaatcagctgccataacgctgtgggtccagtcgacttc
tcccacctctttaccacttcctcatttgactggacagtcaaactgtggtcaactaaacat
aacaagcccctgtattcctttgaagacaatgcagactatgtttatgatgtcatgtggtct
ccagtgcatcccgcgctctttgctacagtggatggcaatggtcgtctggacctctggaat
ctcaacaactacacagaggtgccgtcggcaagtgtgacagtggagggagggtgtgccctg
aaccgggtcagatgggcatcagggggcagagaggtggccgtgggtgattcagagggccgt
gtttggatctatgatgtgggagagcagttagccgtgtcacatacagacgactggagcaaa
tttgcccgtacgctcatggagattcgtgcaaaccaaggggatggagaggaagaaggtgct
ttggagctgcctgcttaa

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