Carassius gibelio (silver crucian carp): 128014559
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Entry
128014559 CDS
T08819
Name
(RefSeq) LOW QUALITY PROTEIN: cyclic nucleotide-gated cation channel beta-1-like
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
cgib
Carassius gibelio (silver crucian carp)
Pathway
cgib04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
128014559
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cgib04040
]
128014559
Ion channels [BR:
cgib04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
128014559
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
NPV_P10
Motif
Other DBs
NCBI-GeneID:
128014559
NCBI-ProteinID:
XP_052454172
LinkDB
All DBs
Position
B25:complement(11688657..11708779)
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AA seq
1563 aa
AA seq
DB search
MFNWVVKVVPHPPDTQEDLREEAITANGKTLNRDKFSSAKTGREEDQSSQTSKDSVQSGM
LNWISNGFVSALPQPAGSPLLTRANPDAKSLQDEGSMDRAGVIGWISQGIGKVVPQPDEK
YIQDQTLESEVTEVYETKELPDQEPLAHIPVVELVSEDESEVEQAAQFPPNVMTWIKSGF
QNAIPQHVTRPPNSSSSTPRSSQCSNKVYSPPPESITSVTEIESKTSPSMVGWIFQGLGL
SMPQAVLKNKEGCLEDGKIVQNGSARSAPADLVLQEIDSEDEAQEETCSATNSLPNSQPQ
SQPQTPWSPEQSLPLSVTTPSQAHIELEDAETQTARWTPMIENIRREAEDTAILIMEERW
IQERLVMARMAEEVARQTAEMAVRELAQARFGIQTIAEEPEDIDQELQVLHEEESDIEVI
RNQIAECQVPSVKEFLPEGQEAEAVDTSFTVQTPVEEFKSSSPLLEEPGPESEPEPEPEE
LQEKQEPRDSSKEEEEEEPEPITQQPQSITSTSVSRTDSQVESTAPEEESSVPSRCDVLK
RCFMRVPYAPQALDNFNQFLKDIDVTLPKVPSMPNLPPALSQITQQLPSLPPQLAQLPQQ
ISQRFSKITPQFPNQTLFSAPHFPSFPVQLSSLPHQLSNIPQQISNLPQKVSSLSQRLTS
RPRFSILPQKVSNIPQQLSSIPKKISDIPQKITSIPQKISNIPQCAQQCYSNIQSRLNKL
KPEQDAQGQPQKSRDLELDRLVHQSPLHSPRTPSPSSPSSVLDLPNVPSYPRLPPITPSR
QLSGVYNPAFHIEDDPTSARPSVSSRLSVHPAVNVEDVDSDRGKGGRRSRPIPPIINPQD
PNLKTLTVPGARKANRTSKRLYSQDDEEEEELETAVRAWPSQSSISSADDGLNQRPSSSA
SQTSTVVNERLQELVKLFKERTERVKEKLIDPDNSDDETPPASPAKQAPAPPPPPPEPPS
EQKSEQEVPEASDEKEEEKTKVLCCKVKPQSKIGRLLQYRFPSSIDPFTNLIYVLWLFCV
SLAFNWNAWMIPVRWAFPYQTPENIHVWLLIDYLCDSIYILDILAFQPRLQFVRHGDLVT
GKKEMRDNYIKAVRFKLDVVSLLPLELLYFKTGINPLLRLPRIMKFMSFFEFNKRLEAIL
TNAYVYRVIRTTTYLLYAVHCNACLYYWGSSYQGLGFSDWTYDGTGNSYFRCYYFAVKTL
LTIGGLPGPTTLFEIVFQLINYFIGVFVFSIMIGQMRDVVGAATAAQTNYRACVDNTVKY
MASYRIPKDVQNRVKTWYSYTWQSQGMLDEQELLDQLPDKMRLDIAVDVSYNIISKVPLF
QGCDRQMIFDMLKRLRSVVYLPGDYVCKKDEVGREMYIIKAGEVQVVGGPDGKTVFVTLK
AGAVFGEVSLLAVGGVNRRTANVVARGFANLLILTKRDLNEILVHYPESQKLLRKKARKM
VMKDKKPAEKKEEEKELIPIIPPRAETPKLLKAALEMTEKTGMKGTWSKLKDRSNRSSVS
LQHSISSSAAPNSPVHEVHSDQDADTLSQISDSSMQIPTTPTSAGDRNAFTEEGPAEEEI
EKK
NT seq
4692 nt
NT seq
+upstream
nt +downstream
nt
atgtttaactgggtggtgaaggtcgtgccacatcctcccgatacacaagaggatctgagg
gaggaagcaatcactgcgaatggaaaaacattgaatcgagacaagttcagttcagccaaa
acaggcagggaggaagaccagtcatctcaaacctcaaaggacagtgttcagagtggtatg
ttgaactggatctccaacggtttcgtaagcgcactgccccaacctgcagggagtcctctt
cttacgagagccaaccctgatgctaaatcacttcaggatgaaggttctatggacagggct
ggagtcattggctggatctcacaaggaattggaaaggtggtcccgcagcccgatgagaaa
tacatacaggaccagactctagaatctgaagtcacagaggtttatgagacaaaggaactt
ccagatcaggagcctttggcacatataccagtagttgagctggtgtcagaagacgagtcg
gaggtggaacaagctgctcagttccctcctaatgtaatgacctggataaagagcggcttc
cagaacgctataccgcaacatgtgaccagacccccaaattccagttcttccaccccgagg
tcatcacagtgctcaaacaaagtttattcacctcctccagagtcgataaccagcgtgacg
gagatcgagtcaaaaacatcccccagtatggtaggctggatttttcagggtcttggtctt
tcaatgccacaagcggtgcttaaaaacaaagaaggatgtctggaggacgggaagattgtg
caaaatggcagtgctcgttcagctcctgcagaccttgttcttcaggagattgactctgaa
gatgaggctcaagaagaaacatgttcagcaacaaactcactgccaaattcacaacctcag
tcccaaccacaaacaccttggtcaccggaacaatctcttccactgagtgtcaccacacct
tcacaagcacacatagaactggaggacgcagagacccaaactgcacgatggacgcccatg
atcgagaacatcaggagagaggcggaggacaccgccatattaattatggaggaacggtgg
atacaggagcgtctggtgatggctcgaatggcagaagaggtggcacggcagacagcagag
atggcagtcagggagttggcacaggcccggtttggtattcaaaccattgcagaagagcca
gaagacattgatcaagaattacaagtgctgcacgaagaggaaagtgatatagaagtcata
cgaaatcaaattgcagagtgtcaagtaccttcagttaaggagtttcttcctgaaggacaa
gaggcagaggctgtagacacttcgttcacagttcaaacccctgtggaggagttcaagtcc
tcttcacctctactggaggaaccagggcctgaatctgaacctgagccagagcctgaggag
cttcaagagaagcaggagcccagggactccagtaaagaagaagaagaagaagaacctgag
ccgatcactcagcaacctcagtccatcaccagcacctctgtctcaagaactgattcacag
gtggagagtacagctcctgaagaggaaagcagtgtcccctccagatgtgatgtgctgaag
agatgtttcatgcgtgtaccatatgcgccacaggcccttgacaacttcaaccagttcctg
aaagacattgacgtcactttgcccaaagtgccttccatgcccaatctgccccctgctctc
tctcaaatcacccaacagctgccatcactccctcctcaactggcacagctaccgcagcaa
atttcccagcgattctccaaaatcaccccacagttcccaaaccagacgctttttagtgct
cctcattttcccagcttccccgtgcagttatccagcctcccacaccagctgtccaacatt
ccgcaacaaatttcaaacctcccgcaaaaggtatccagcctttcacaaagactgaccagc
cgtccacggttttccatccttccacaaaaggtctccaacattccgcaacaactctccagc
atcccaaaaaaaatatccgacattccacaaaagataaccagcattccacagaagatatcc
aacattccacagtgtgcccagcagtgctactctaacattcagagccgtctcaacaaactt
aaaccggagcaggatgcccaagggcaaccgcagaagagtagggatctggagttggaccgt
ctcgtccaccagtccccactgcattccccccgtaccccttcaccctcttccccaagctcc
gtcctagacttacccaatgtaccctcttacccccgtctgccacccatcaccccttccagg
cagttgtcaggtgtctacaaccctgccttccacattgaggatgaccccacctctgctaga
ccctcagtgagctccagactgagtgtgcatccggccgtgaatgtcgaagatgtcgactca
gaccgagggaaaggaggaagacgatctcgccccataccaccaataataaacccacaggac
cctaacctcaaaaccctcactgtccctggtgcccgtaaagccaatcggaccagcaaaaga
ctttactcacaagatgatgaggaagaagaggagttagaaactgcagtccgggcctggcca
agccagagtagcatctcaagtgcagatgatgggctaaatcagcggccatcctcttcagcc
agccaaactagtactgtagtaaatgagaggttacaggagctggtcaagctgttcaaagag
agaactgagcgagtcaaagagaagctgattgatccagataactcggatgatgaaacacca
cctgcctccccagctaagcaagctccagctcctcctcctcctcctcctgaacctccatcg
gagcagaaatcagagcaggaggtacccgaggcctctgacgagaaagaagaggagaaaaca
aaggtcctgtgctgtaaagtgaaacctcagtctaagattggtcggcttctgcagtaccgt
tttccatccagcatcgaccccttcaccaatctgatctacgtactatggctgttttgcgtg
tctttggcgtttaactggaacgcatggatgattcctgtgcgttgggcatttccatatcaa
acaccagaaaacatccatgtttggctgttgattgactacttatgtgattccatttacata
ctggacatcctggcctttcaacccagactacagtttgtgcgtcatggagaccttgtgacc
ggcaagaaagagatgagagataattacatcaaagctgtacgattcaagctggatgtggtc
agtcttcttcctctggagctcctctacttcaaaacagggattaatccacttcttcgatta
cccaggatcatgaagttcatgtctttctttgagttcaacaagcgtctggaagctatactg
accaacgcttacgtttacagagttattcgaaccaccacctacttgctgtatgccgtccac
tgcaatgcatgtctgtactactggggctcttcatatcaaggtctgggtttctcagattgg
acctatgatgggacaggcaatagttattttcgctgctactactttgctgtgaagactttg
ctgaccattggtggtctgccaggacccacaacactttttgagattgtgtttcagctcatc
aattactttattggagtgtttgtgttctccatcatgattggtcagatgagagacgttgtt
ggtgcagcaactgcggctcagacaaactatcgtgcctgtgtggataacacggtgaagtac
atggcctcctaccgcatccctaaagatgtgcagaacagagtgaaaacctggtacagctac
acgtggcagtcccaaggcatgctggatgaacaagagctattagatcaactacctgacaag
atgaggctggatatagcagtggacgtcagctacaacattataagtaaagtgccactattc
cagggctgtgatagacagatgatctttgacatgctgaagaggctcagatcagtagtgtac
cttccaggagactatgtctgcaagaaggatgaggtgggtcgtgaaatgtacattataaag
gcaggagaagtccaggtagttggtggtcccgatggaaagacagtgtttgtgaccctgaaa
gcaggagctgtgtttggagaggtcagcttgcttgctgtgggtggagtaaaccggcggaca
gctaatgttgtggcgcgtggttttgctaacctcctcatcttgaccaaaagggacctgaat
gagatcctggtgcactatccagagtcccagaaactactgcgcaagaaagccaggaaaatg
gtgatgaaggataaaaagcctgctgaaaagaaagaggaagaaaaggagctcattccgatt
attcctcctcgagccgagacgcccaaactgttaaaagctgcgctggagatgacagagaaa
acaggaatgaaaggaacatggtccaaacttaaggacaggagcaacagatcaagtgtctcc
ttgcagcactccatctcttcctctgcggcgcccaactctccagtccatgaagtgcactca
gatcaagacgcagatactctgtctcagatatcagacagttcaatgcaaatccccacgacc
cccaccagcgctggagacaggaatgcatttactgaagagggcccagcagaggaggaaata
gaaaagaagtaa
DBGET
integrated database retrieval system
