Carassius gibelio (silver crucian carp): 128014711
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Entry
128014711 CDS
T08819
Name
(RefSeq) aggrecan core protein
KO
K06792
aggrecan 1
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cgib00535
]
128014711
00536 Glycosaminoglycan binding proteins [BR:
cgib00536
]
128014711
04091 Lectins [BR:
cgib04091
]
128014711
Proteoglycans [BR:
cgib00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
128014711
Glycosaminoglycan binding proteins [BR:
cgib00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
128014711
Lectins [BR:
cgib04091
]
C-Type lectins
Lecticans
128014711
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xlink
Lectin_C
Sushi
V-set
I-set
DUF8128
Motif
Other DBs
NCBI-GeneID:
128014711
NCBI-ProteinID:
XP_052454377
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All DBs
Position
B25:complement(12346006..12358505)
Genome browser
AA seq
1349 aa
AA seq
DB search
MMSLIWLLLYAYIHAISGMILFGDMADQDSPISVSIPVEPPLRPLLGGSMIIPCYFQDNT
VQDPGAPTTAPLPHRIKWSYIYKGRISLILVASGGVVQVETDYVDRVHLVNYPMVPTDAT
IEISELHSSDSGTYRCEVMQGIEDNYDSVEMQVQGIVFHYRAISTRYTLTFEMAKAACIQ
NSAVIATPAQLQAAYDDGYHQCDAGWLSDQTVRYPIHEPREPCYGDKENFPGVRTYGVRD
INETYDVYCFAEKMSGSVFYSMSVEKFTFAEAKDQCANLGAQLATTGQLYLAWKAGMDVC
NAGWLADRSVRYPINIARPQCGGGLLGVRTVYLFPNQTGYPYPDSRYDAICYAEKEDKVS
TKTSPFPKISTTTDAMISVATFTSSPSDYTEEVNTGEEVRGQLVTEEPLNTTSIESPLPL
LPNITEVEEDIINVATARPYLGYEIPMDNETAETKGVVFHYRADSGRYAYTFEEAQVACQ
KLGAIIATPELLQVAYEAGLHQCSAGWLKDQTVRYPTVNPQKKCSGDQKDLPGIHSYNVR
PAHERYDVYCYMEQIKGEIFHVSSLAGFTYYEAVAHCIKLGSTLASTGELFASWNEGFHK
CSPGWLSDRSVRYPVHNLGFGCGENKTGVHTIYTQPNQTGFPNPYSRYDAYCIRANLSML
LDEDMMNTTKMGMDLNMTDITELLRPVRPIVPPLLVELSGSGSGSGSGSGSGSGSGSSSG
STSASGDPDSSSGYMSGSGIPSGSISGSGQSGDGSGHLVRYQEGADTLMWQTSASGSTME
AREGSGSGSGVIITSVSSGDQESGEESGLFYEQSGRGPGSGSSGSGTSGFFSGEESSLPS
GFGSGSSGSGTSGFFSGEESSLPSGHGSGSSGSGTSGFFSGEESSLPSGHGSGSSGSGTS
GSFSGEESSGSGFSGVSFINTEMIDLTASTSGKQELSGVSPFDLTDVSGLSSAFGSGSAS
GSGSAIGFGSGTIIDFASGSAIGFRSGSASGASGYPSDPSGEVSGHIQSQDGKIVILTDD
EVELMFRPTIGTEQGRGSVEISGEGSSQEHYAEDVSISLSNSTSYEDYWSVNETVDLLPE
GQNQLKVITEAFDVTDQSPLNTTPSTTSILITPPSAVLQTPKAMEEPFLTDAVQGCAEGW
MEFMGSCYIHFDVRETWTTAEQHCQELNSHLVSISSQQEQVFVKNQARDYQWIGLNDKDE
QNQFRWTDGSPLKYENWRPNQPDNYFSTGEDCVVMILHEDGQWNDVPCNYHLPFTCKSGP
VTCSSPPEVKNARMLGNSKDRYPVNSSIRYQCDSGFTQRHLSVVRCLPDGQWEEPKVECI
GGETNNRLRKRSLKTHPKAVNSRTWRKVL
NT seq
4050 nt
NT seq
+upstream
nt +downstream
nt
atgatgtctttgatttggctcctgttatatgcatacatccatgccatttctggcatgatc
ttatttggggacatggctgatcaggacagccccattagtgtgagtatccctgttgaacca
ccactgcgtcccctattggggggaagcatgattataccttgctacttccaggacaacact
gtccaggaccctggcgccccaaccactgccccacttccccaccgtattaagtggagctac
atctacaagggcagaatatctcttattcttgttgccagtgggggtgtggtgcaggttgag
acagactacgtggaccgggttcatttggtaaactaccccatggtgccaactgacgccacc
attgagatctcagaactccactccagtgactccgggacctaccgctgtgaggttatgcag
gggattgaagacaactacgattctgtagaaatgcaagtccaaggcattgtgtttcactac
cgagcaatatctacccgatataccttgacatttgagatggcaaaggcagcctgcatccag
aacagtgctgttattgcaactcccgcacagttgcaagctgcctatgatgatggataccat
caatgtgatgctggttggctttcagaccaaactgtgaggtatccaattcatgagccaagg
gagccttgctatggagacaaagaaaatttcccaggagtacgaacatatggagtcagagac
atcaatgagacctatgacgtgtactgttttgcagagaaaatgtcaggtagtgtgttctac
tctatgtctgtggagaagttcacctttgcagaggctaaagaccagtgtgcaaatttggga
gcccaactggccaccacagggcaactctaccttgcatggaaggctggtatggatgtgtgc
aatgctggctggctggcagacaggagtgtgaggtaccccattaacatagctcgaccccag
tgtggtggggggcttttgggagtgcgaacagtgtacctgtttccaaatcagactggttat
ccatacccagactcccgctatgatgcaatatgttatgcagaaaaagaagataaggtttca
acaaagacctcaccatttcctaaaatatccactaccacggatgccatgatcagtgtggct
acattcacctcgagcccttcagactatactgaagaggtgaacacaggagaagaggtccgt
ggtcagctagtgacagaagagcctcttaacaccacaagcatagaaagtcctctaccttta
cttcccaacataactgaggttgaggaggacattattaatgtggccacggctcggccttac
ttgggatatgagattcccatggacaatgaaactgctgaaactaagggagttgtattccac
tatcgcgctgactccggacgctatgcttacacctttgaagaagcacaagtggcatgtcag
aagctgggagcaatcatagccacccctgagcttcttcaggtggcttatgaagctggcctt
catcaatgcagtgcaggttggctaaaggaccagactgtcagatatccaactgtgaatcct
caaaagaagtgctccggagatcagaaggacctccctggcatacactcttacaatgtcagg
cctgcacatgagcggtatgatgtgtactgttatatggaacagataaagggagagatcttc
catgtgagctcattagcaggcttcacctactatgaagctgttgcccattgcataaaactg
ggatctactcttgcttcaactggagaactgttcgcctcatggaatgaaggtttccacaag
tgcagtccaggctggctgtctgatcgcagtgtccgctatcctgtccacaacctaggcttt
ggttgtggtgaaaacaagacaggagtgcatactatttatactcaaccaaaccaaacaggc
ttcccaaacccatactccagatatgatgcatattgcatcagagcaaatctgtctatgctg
cttgatgaagatatgatgaacactacaaagatggggatggatcttaacatgacagatata
acagagctactgagacctgttcgcccaattgtccctcccttgcttgtggaactgtctgga
tctggatctggatctggatctggatctggatctggatctggatctggatcgagctcgggc
tcaacatcagcatcaggtgatcctgattccagttctgggtacatgtcagggagtggcata
cccagtgggagcatatccggttctggccaaagtggtgatggatcaggtcaccttgtgagg
taccaagaaggtgcagatacactcatgtggcaaacttctgcctcgggcagcactatggag
gcaagagaaggtagtggcagtggcagtggtgttatcattacttcagtatcatcaggggat
caagaatctggagaggaatctggactcttttatgaacaaagtggcagaggacctggcagt
ggatctagtggttcagggacaagtggattcttcagtggtgaggaatcaagccttccatca
ggatttggcagtggatctagtggttcaggaacaagtggattcttcagtggtgaggaatca
agccttccatcaggacatggtagtggatctagtggttcaggaacaagtggattcttcagt
ggtgaggaatcaagccttccatcaggacatggtagtggatctagtggttcaggaacaagt
gggtccttcagtggtgaggaatcgagtgggtcgggcttctctggtgtatcatttataaac
acagaaatgatagatctgactgcaagtacttctggaaaacaggaattgtctggtgtttct
ccattcgacttgactgatgttagtggtctcagctctgcttttggatctggttctgcctct
ggatctggctctgccattggctttggatctggcaccatcattgactttgcatctggttct
gccattggctttcgatctggctctgcttctggagcttcaggttatcccagcgatccctct
ggtgaggtatctggccacattcagagtcaggatggaaagattgtcattctaacggatgat
gaggttgagttgatgtttaggcctacaattggaacagaacagggtcgtggatcagtggag
atcagtggagagggcagtagtcaagaacattatgctgaggacgtctccatatctctttct
aatagtacttcatatgaagattattggagtgtcaatgaaactgttgatctcctaccagaa
ggacaaaatcaacttaaagtcatcactgaggcatttgatgtgactgatcagtcaccactg
aacacaacaccatccacgacttctatactcattactccaccttcagctgtactacaaaca
ccaaaagctatggaggagccatttttaactgatgcggtacagggatgtgctgaggggtgg
atggagttcatgggcagctgttatattcattttgatgtgcgtgagacctggaccactgct
gagcagcactgtcaagagctaaactctcacctggttagcatatcctcccaacaagaacaa
gtgtttgtaaaaaatcaagctcgtgactatcaatggattggacttaatgacaaggatgag
caaaatcagtttcgctggacagacggaagccctttgaaatatgaaaactggagacccaat
cagccagataattacttcagcaccggagaagactgtgttgtaatgatattgcatgaggat
ggccagtggaacgatgtaccctgcaactatcatcttccttttacttgcaagagtggacct
gtcacgtgttcatcacctcctgaagtgaagaatgccaggatgttaggcaacagcaaagat
cgctaccctgttaattcttcaattcgataccagtgtgacagtggattcacacagcgccac
ctttcagtggtacgttgcttacctgacgggcagtgggaggagccaaaagtggaatgcata
ggaggtgaaacaaacaacaggctacggaaaagatccctcaagacacatcccaaagcagtc
aatagtcgaacgtggaggaaagtcctctaa
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