Carassius gibelio (silver crucian carp): 128016013
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Entry
128016013 CDS
T08819
Name
(RefSeq) plakophilin-1-like
KO
K10387
plakophilin 1
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
cgib04812
]
128016013
Cytoskeleton proteins [BR:
cgib04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
128016013
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
HEAT
HEAT_EZ
HEAT_2
Adaptin_N
Arm_2
Atx10homo_assoc
Cnd1
Motif
Other DBs
NCBI-GeneID:
128016013
NCBI-ProteinID:
XP_052456278
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All DBs
Position
A6:29328039..29339905
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AA seq
718 aa
AA seq
DB search
MMPEPLRSALSIGGVEDTSLAVPSDREPRSAQQRVLEQVHTINRSKSKYSSKSVSGVTSP
TSPEGNSVFNDFKFSPGASLGRPSVSRGGTMTNGTTQNQGFMWQSTNSHSSSGQQVTSGS
GKLDRYYNTTRTLPAQTRTNNQLFNYQATRSAPDLGFKSSVNGRTGRTIRTQSTQQIFNR
VPNSQPAQALGNGSLNRMSNSNQTITQFSRRPSSLLSNGGESRMSMIRTGQVKDISGMNA
EKIMMDMTMQDAIDYLFSADESVQLCGAAYIQHSTFTDDKAKQEVLMLKGIPPLVNLLHS
PSPRVQEAVAAALRNAVFKNQANKEEVQRCGGITQTVQLLGDTSSETQKHLTGLLWNLSS
ADNLKPDLLRFALPAITEKVIEPFSASSDDSSNTSPAPDVFYNATACLRNLSSSKVGNRQ
AMRNSKGLIDSLMRYTENCVKDGIFDNQSLENCVCILHNLTYQLETEMPSLFTKINALAS
NAPNRASSSDTGPIGCFGSKSHKLQQERMFNYPVMEDSNPKGAGLLFHPKALQMYVNLLR
SSESNAILEASCGALQNLTATEGLVSNVLSDTIIQRLNGLKSISPLLQSPNPAVQNSAVA
LLGNLSRSTDTNKIMARQTLPQLVEFLNSGLKKVDTSPEYDSTMSTAIHCTHNLMKADPE
ISKSLLNTSLINSLQTTSLNMGLPKTSISAGVFLHSLWSEKNIQSFLKKKGMNKRMFL
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgatgcccgagcctttaagatcggctttgtccatcggaggtgtggaggacacgtctctc
gcggttccgtccgatcgcgagccgagatccgcgcagcagcgagttctggagcaggttcac
accatcaataggagcaagtccaaatacagcagcaaaagcgtgtccggagtcacttccccc
accagccctgaaggtaacagtgtgtttaacgacttcaagttttctcccggcgcgtctctc
ggcagaccctcggtcagcagaggaggaaccatgacaaatgggactacgcaaaatcaaggc
tttatgtggcagtccaccaactctcacagctccagcggtcagcaggtgaccagtggctcg
ggcaagttagatcgttactacaacactactaggaccctccctgcccaaacccggaccaat
aaccaactgttcaactaccaagccacccgcagcgctccagacctgggcttcaagtccagc
gtcaacggcaggaccggcaggactatacgcacccaaagcacccaacagatcttcaacagg
gtcccgaacagtcaacctgctcaggctctcggtaacggctctttaaacagaatgtctaac
agcaatcagaccatcacacaattcagcagacgcccgtcttccctgctgtccaacggagga
gagtccaggatgtccatgatcaggaccggacaggtcaaggatatctctgggatgaacgca
gagaagattatgatggatatgacgatgcaagacgcgatcgactatctgttcagcgcggat
gagagcgtccagctgtgtggagccgcttacatccagcacagcaccttcactgatgacaag
gccaagcaagaggtgctgatgctgaagggcattcctccgctggtcaacctgttgcacagc
cccagtcctcgggtccaggaggccgtggccgctgccctgaggaacgctgtcttcaaaaac
caggccaacaaagaggaagtgcagcgctgcggaggaatcacacagactgtgcagctgctc
ggagacaccagctctgagacacagaaacacctgacaggtctcttgtggaacctctcctct
gcggataatcttaagccggatctgctccgctttgccctgcccgcaatcacagagaaagtc
atcgagccgttttcagcaagttcagatgacagctccaacaccagcccggcaccagatgtc
ttctacaacgccacggcatgccttcgcaacctgagctcctccaaagtagggaaccgacaa
gccatgcgcaacagcaaaggcctcatcgactcgctcatgcgctacacagagaactgtgta
aaagatgggatctttgacaaccagtccttggagaactgcgtctgcattctgcacaatctc
acctaccagctggagaccgagatgccgtctctcttcactaaaataaacgcactggccagt
aatgctcctaatcgcgccagctcctcagacaccggtccgatcggctgcttcggctccaag
agccataaactgcagcaggagagaatgtttaactatccagtgatggaggacagcaatcct
aaaggtgctggcttgctcttccaccccaaagccctgcagatgtacgtcaatctgttgcgc
tccagtgaaagcaacgccattcttgaggccagctgtggagcgctgcagaacctcacagcc
actgaaggcttggtatcgaatgtgttgagtgatacaatcattcagaggctcaacggtctt
aagagcatcagtccgctgttgcagtcgcccaatcctgctgtccagaacagcgcagtcgct
ctgctcgggaacctgtccagatccacagatacaaacaaaatcatggctcgacagactctt
cctcagctggtcgagttcctgaactcagggctcaagaaggtcgacacctcacccgaatat
gacagcactatgtccacagctattcattgcacacacaacctgatgaaggcggaccctgag
atcagcaagagtctgctgaacaccagcctgatcaactccctccaaaccaccagtctcaac
atgggtctgccaaagaccagcatttcagcaggagtttttcttcactctctgtggtcagag
aagaatattcagagtttccttaaaaagaaaggcatgaataagaggatgtttttgtga
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