Carassius gibelio (silver crucian carp): 128016625
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Entry
128016625 CDS
T08819
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 1-like isoform X1
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
cgib
Carassius gibelio (silver crucian carp)
Brite
KEGG Orthology (KO) [BR:
cgib00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cgib04131
]
128016625
Membrane trafficking [BR:
cgib04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
128016625
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_2
TPR_8
TPR_1
TPR_7
TPR_NPHP3
SH3_1
SH3_9
TPR_10
TPR_19
ARM_TT21_4th
SH3_2
Motif
Other DBs
NCBI-GeneID:
128016625
NCBI-ProteinID:
XP_052457240
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All DBs
Position
A7:complement(13926531..13943259)
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AA seq
1327 aa
AA seq
DB search
MSAAARRNSSKTGNGVKSESDPDKTRTVRRELSNECTHSEWDNIMESSSRGRDADYKISR
GSIKGTPGAPDDNIPTVLAIQLAMVEGPDRLPADEDTQEVLCRKLCLLEADLSGVMTLIS
ELSAHFVSINSEERTIFITFKALEEIWKFSTYHKMGFLGQCMENLLMDQEFWLISLDQHS
GIEISIKEETLNLMYKGFLMQEGSFFGCCTANQMFDSSTSGSDLYLEKGDIALFEPPFLG
SGWTVLSLADGDRGTKPKPALEPVIPFHEWFLKSCPESILVGGGKDTGGLPFQIAVGVCE
ATEEYDADGPDELSFQAGERIIILGLLVACFEWFLGKLEKTGDTGLVKTKLVKTTTSSCE
SSGIFLNDEDRQIVTLDQDKIKEETIALLKKICQSNVGTNYKLDLAKEIPRSDENKTHQT
ELNNLKQKVKHILSEGDKSQRNDVSSVTIKQQMKKQADNTEMSRETPRFSFCSELDSTSP
DGHHALLSFLSSRDYQPEFLLLYSAYPEFLISLFDGQSDEEEIVVYLGIARELARKKHVS
WAQSRICFLLGQLCAGRSKFSQARVYYEEALNVPKDCFTDMFLLSAIYSNLALIYLTQKN
HERFFTFSERFSALLMAVPECLFGCEDPEVLKYVLKKAVLAKNQLAEARACFLQAKLHLK
IKDAMSAIPFIERLLILADEVPVACDDTMSHVFLVLARLYSDQRLPRLAESCAKKASLQV
GATMSYCLCSISLLLENASELYGVAIPTQIAPYLTRAAALVPPSKEPVLGHVQALCLSWL
FHRHGMPDRAVHYMSTVLDHSGISSIGHADTTAALLWLAWLYICNKQPGTALEVLDTVLS
SLPEHCTTQLEGVVYNMRAISYRHSADIRQASESYRAAIEICEEFEDRRNWAIALANFGF
MCLQIKAKRLAEEYLTQSVELFSELEDEGHELSFISVLLELGKHFVSQGNHEHGKTYYEW
ALLIAMFINHMDSQLQATCHLCQLYEEVCPDEAQCIIYNEHQLNLLQRIGDKSLEGEILD
KISQLYLNLATEKANRAALDYTKQSLGIFIDLGRKRKEAHAWLKAGKIYHILQQTELVDL
YVQVAQDMALSTGDTLFTLEMLEAAGDVFFNSSHDREKAICFYRDRALPIALKTSSVRSQ
LRLCNKLSELLLQLGQCSEAIEYAQTALDISTSLADHLNERVAFHRLATLYHCLGQFEMA
EHHFLKALSLCPSPLQYDEEGLYYVRVYKTLGDIIFYDVKDPFDAAGYYHLALAAAMDLG
NKRSQLELCTRLATIYHNFLMDRELSLFFYQQARAFANDLHIRRINLAPDYSFRTTAQYK
STITGAR
NT seq
3984 nt
NT seq
+upstream
nt +downstream
nt
atgtcagccgctgctcgtagaaactcgtccaaaaccgggaacggcgtgaagtccgagtcc
gacccggataaaactcggacggtacgcagagagctgtcgaatgagtgcacacacagtgaa
tgggataatattatggagtcttcgtctagaggtagggatgcggattataagatatcaaga
gggagcatcaaaggtacccctggagctcctgatgataatataccaacagtgttggctatt
cagctggctatggtggaggggccagatcgacttcctgccgatgaggacacacaggaagtg
ctttgcaggaaactttgtttgctggaagctgacctttcaggggtcatgaccttaatctct
gaactgtctgctcattttgtatccatcaacagtgaggaaaggactatatttatcactttt
aaagcccttgaagaaatatggaagttcagcacataccacaagatgggcttcttggggcag
tgtatggaaaaccttctcatggaccaggaattctggttaatctccctcgatcagcattca
ggaattgagatctcaattaaagaagagacgctaaatctgatgtataaaggctttctaatg
caagaagggtctttctttggatgctgcacagcaaatcagatgtttgatagctctacgtca
ggtagcgacctttatctggagaagggggacatcgctttgtttgagcctccattcttagga
tcagggtggacagtgctgtcacttgcggatggggatagaggaaccaaaccaaaaccagct
ctggagcccgtcattccctttcatgagtggtttctaaagtcctgcccagaaagtatatta
gtgggtggtggaaaggacacaggtggccttcccttccagattgcagtaggggtctgtgag
gccacagaggagtatgatgccgatggaccagatgaactgagtttccaggctggtgaacgc
atcatcatcctgggcctgctggtggcctgttttgaatggtttttgggaaaactggagaaa
actggggatactggacttgtcaaaaccaagctggtcaaaacaaccacttcatcttgtgaa
tcatctggcatattcttgaatgacgaggacagacaaattgttaccttggatcaggacaaa
attaaagaggagactattgctttattgaagaaaatatgccagtctaatgttggcacaaac
tacaaacttgatctggcaaaagaaattccaagatcagatgaaaacaagactcatcagaca
gaattaaacaatctaaaacagaaagtcaaacacattctgagtgagggagataagtctcaa
agaaatgatgtttcttcagtcaccatcaagcaacagatgaagaaacaagctgataataca
gagatgtcccgggaaaccccacgtttttctttctgctcagaactggacagcaccagtcca
gatggacatcatgctctcctttcgttcttgagcagtcgtgactaccagccagagttcctg
ctcttgtacagtgcttacccagaattcctcatctcactttttgatggccaatccgatgag
gaggagatagtggtgtatttaggcatagcccgagagctggcacgaaagaagcatgtctcg
tgggcgcagagcagaatctgttttcttcttggacagctttgcgcagggaggtcgaagttt
tctcaagctcgggtttattacgaggaagccttgaatgtacccaaggattgcttcacagac
atgtttctgctctctgccatttactccaacctagcactcatctacctaacacagaagaac
catgaaagatttttcacgttttcagagcgcttttctgctttgttgatggctgtccctgaa
tgtttgtttggctgtgaggaccctgaagtattaaaatatgtacttaaaaaggctgtactg
gccaagaatcagctcgccgaggcccgagcctgcttcctccaggccaagctccacctgaag
attaaagatgccatgagtgcaatcccgtttattgaaaggcttttgatccttgccgatgag
gttcctgtggcatgtgatgacacaatgagccatgttttcctggtgttagcaagactctac
agtgaccagagactgccacgcttggctgaaagctgtgcaaagaaagcgtcacttcaggta
ggagccaccatgtcatactgtctttgtagtatctcactattgttggaaaatgcatcagaa
ctgtatggagtggccatcccaacacaaattgctccatacctgacccgtgccgctgcttta
gtgccccccagcaaggagccagtgctgggtcatgtccaagctctgtgtttgtcctggctc
ttccatagacacggtatgcctgacagagctgttcactacatgtccactgtcctcgaccac
agcggtatatccagtattggccatgcagacactactgctgctctcctgtggttggcgtgg
ctgtacatctgcaacaagcaacctggcacagctctggaagtgctagacactgtgctgtca
tcgctccctgagcactgtactactcaactggaaggagtggtttacaacatgcgagccatt
tcatacagacattcagcagacatccgacaggcctctgaaagctaccgggctgcaattgag
atctgcgaggagtttgaggatagacggaactgggctatagcactggccaactttggattc
atgtgtttgcaaatcaaggctaaaagattggcagaggaatacctcactcagtcagtggag
ctgttctccgagcttgaggatgaagggcatgaactcagttttatttcagtgcttcttgag
ttggggaaacactttgtttcccagggaaaccatgagcatgggaagacctactatgaatgg
gccctgctgatcgccatgtttataaatcacatggatagccagttgcaagccacatgtcac
ctgtgtcagctttacgaagaggtgtgtccagatgaagcccagtgtatcatctacaacgag
caccagctgaaccttcttcagcggataggagacaagagcttagagggagagatactggac
aagatcagtcagctgtacctgaacctggctaccgagaaagccaacagagccgctttagat
tacaccaaacagagcctgggcatcttcatcgacttgggcagaaaacgcaaggaggctcat
gcctggctaaaggcagggaagatttaccacatcctccaacagacggagctagtggacctc
tacgtgcaggtagcccaggacatggctttgagcacaggagacacactcttcaccctggag
atgttggaagcagctggagatgtgttcttcaacagctcacatgacagggagaaagccatc
tgcttttacagggaccgagcccttcccatcgcactaaagacgagcagtgtgcgctctcag
cttaggctgtgtaacaagctttcagagcttctgctgcagctgggacagtgctcagaggcc
attgagtatgctcaaactgcattagacattagcacgagtctagctgaccatttaaatgag
cgagtggcattccatagactcgctacgttgtaccattgtctgggtcagtttgaaatggca
gagcaccactttctgaaagccctgtccctgtgcccctcacccctgcagtacgacgaggaa
ggcctgtactatgtcagggtttacaaaacacttggagacatcatcttctatgatgtaaag
gacccatttgatgctgctggctattatcacctggccttggctgctgctatggatctgggc
aacaagaggtctcagctagagctgtgtactcggttggccaccatctaccacaactttctc
atggaccgtgaactctcgctgttcttctaccagcaagccagagctttcgctaatgatctc
catattcgtcgtatcaacctggcaccagactacagcttcaggaccacagcccagtacaaa
agcacaataactggggcaagataa
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