Colletes gigas: 122396056
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Entry
122396056 CDS
T07492
Name
(RefSeq) tetratricopeptide repeat protein 37
KO
K12600
superkiller protein 3
Organism
cgig
Colletes gigas
Pathway
cgig03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cgig00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122396056
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cgig03019
]
122396056
Messenger RNA biogenesis [BR:
cgig03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
122396056
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_14
TPR_16
TPR_1
TPR_19
TPR_8
TPR_17
TPR_11
TPR_CcmH_CycH
TPR_12
ANAPC3
TPR_6
TPR_9
TPR_15
BTAD
ARM_TT21_C
DUF6584
Glyoxalase
Motif
Other DBs
NCBI-GeneID:
122396056
NCBI-ProteinID:
XP_043250095
LinkDB
All DBs
Position
Unknown
AA seq
1265 aa
AA seq
DB search
MSDKANTILKEAYKLYKQNEYTNVITKCKKIIKEDGNNYKAFMLLAASMNKIEEFQFKVP
EILERAIKIEPDNLIAWKYLVQYYEQHSSNIDNYSNLMLAYCKVLQFDDTCNFSSTLNKI
TEVYLQLDNDNNLIETVESLNELRNRLDGTKLKLIDEVLIQILIDNFDKLNDYQNLLESV
FESAINSIVRHSRHNYYRKYLNILHDTGKLATSIDVVIDMHRQFPKDTLPLEYICYIYYK
QNMMNENSAIDTSIDQFYETLTRLNLDSDIVEIVKAMHLKETDNLIATREILKGILTLIP
NLLYGWVILSEINARLYCWEDAENAARQAVNLMKHKVEDDLLYKLEMIVIESISKTNNEQ
KWETALQMCDDHLEKRRSKRLELIRARIRVLLDDPDVHVELNNLESLSETRVQATILKAL
HLKEHEQFEVAVNYLESALETSEAWLLSGIIYWKMGKYNSSQMALLSGIKADRYNWECLV
YLGHYYREHGNDLERSRRCYQTALQINPSSEEAGTGLSTAYRLLKDHDANIQLLQRLTVK
DKGPKWAWMQLGLQYLDQGDALQAIKALQRVIRADPNNNINWEALADVYFVRGAHTSALK
SYQRALDLNPKSFYSMIQLANIKLFLGQYSSAKKDFEHILLSKSCYVPALKGLAEACIAL
AKVNTSQQFLGRAVDNLQQAMDSLALVITSRNDLSCVWKLLGDVCYRAALLPTKYSRLKV
PLVLMKSEMTEYTVLTERRDILLLSARCYCCALSLSPQSPLLWHDLASCYLMRLHLDPSI
DHKNLASKCLAIAKHAVKLCPSSWLHWNFLGIVCMSPYIKNYALAQHAFVMAIDRELNNS
MVWSNLGTLYLHVGNWYKANEAYNQAQRADPAYMNSWIGQALLAEMMSSQEALDLFRHST
QLGYHPQAAVGYAHSVLTVLKNSTIERDSLHKYIIENMHAVVVASDVMNWYVEQHPDDCY
ARNAYGLLLERQKLRRSVAEQFAAALPLCTDEEKNLVCINLARVLMQLDNPVKAVKLCRS
VKRISYNSQCHLALALFKAGEYEESYNAYETALNLHENTDIEKAYTLCAMAAITYIFQGV
HDTKTLLFQCIQIQPPVITGFLAAASLGILHVDVNLAVLVMNELKPYADHPTHGPHVANL
SAYSHLISNNIKSAIATLSKAIFKHPDDARYWIHLLRIISQIDLATFNRCAQKALFLSRN
TVNTDVMQLACVSFFKYFAQSSTPASIKFIQKLLFAYPGNIENLITYVTPFLQMSKELKH
SEITV
NT seq
3798 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacaaggcaaacacaattttaaaagaagcttataagctatataaacaaaatgaa
tatacaaatgtgattacaaaatgcaagaagataattaaagaagatggaaataattataaa
gcctttatgttattggctgcttcaatgaacaaaattgaagaattccagtttaaagtacct
gaaatactcgaaagggctatcaaaattgaaccagacaatctaatagcttggaagtattta
gtacaatattatgagcaacactcgagtaacattgataactacagcaacttgatgttggca
tattgcaaagtattacaatttgatgatacatgcaacttttcatccactttgaacaaaatc
acagaggtttatttacaacttgataatgataataatctgattgaaacagtggaaagtcta
aatgaattaagaaacagattagatggtacaaaattaaaattaatcgatgaagtacttata
caaatactgatagacaattttgacaagctaaatgattatcaaaacctattagaaagtgtt
tttgaatctgcaataaacagtattgtaagacacagtcggcataattactatagaaagtac
ttaaatatattacatgatacaggtaaattagctacatcaattgatgtagttatagatatg
catcgacagtttcccaaagatactttgccattagaatatatatgttatatttactacaaa
caaaatatgatgaatgaaaattctgctattgatactagtatagaccaattttatgaaact
ctcacaaggttgaatttagattcagatattgtggaaattgttaaagcaatgcatttaaaa
gaaacggataatttgatagctaccagagaaatactgaaaggcattctcacgctgatccca
aatttattatatggttgggtaatactgagtgaaataaatgccagactttattgctgggaa
gatgcagaaaatgcagcaagacaagcagtaaatcttatgaagcacaaagtggaagatgat
ttgttgtataaattagaaatgatagtgattgaatctataagcaaaactaataatgaacaa
aaatgggaaactgcattgcaaatgtgcgatgaccatttagagaaacgtcgttctaaacgg
ttggaattgatccgtgcacgcattcgcgtgttattagacgatcccgatgtacacgtcgaa
ttaaacaacttggaatcactaagcgaaactagagttcaagctactattctcaaagcacta
cacttaaaagaacacgaacaatttgaggtagcagtaaactatcttgaatcggctttggaa
acatcagaagcttggttactatctggtataatatattggaaaatggggaagtataatagc
agccaaatggcacttttaagcgggataaaggccgatcgttacaattgggagtgcctggtt
tatttggggcactattatcgcgaacacggtaacgatttagaacgttcgaggcggtgttat
caaactgcattgcaaattaatccgagttccgaggaagctggtactggattaagtactgca
tacagattgctcaaagatcacgatgctaatatacaactgttgcagagattgactgtaaaa
gacaagggtccaaagtgggcgtggatgcaacttggtttgcagtatcttgatcaaggggac
gcgttgcaagccatcaaggcgcttcagcgcgttatcagggccgatccgaacaataacatt
aattgggaagctttagcagacgtgtacttcgtacgaggtgctcacacgtcggcgttgaag
tcttatcaacgtgcgttagacttgaatcctaaatcgttttactcgatgatacagttggct
aatataaaattgtttctcgggcaatacagcagcgcgaagaaggactttgaacatatactg
ttgagcaagtcgtgctacgttcctgctttaaaggggttggccgaggcgtgcatagctttg
gcgaaagtaaacacgtcgcaacaatttctgggtcgcgctgttgacaatcttcaacaggca
atggacagtttggctctcgttattacgtcacgcaatgacttatcttgtgtttggaagcta
ctcggcgacgtatgttacagagcagctctgttgccaacaaagtacagtcgtttgaaagta
ccgcttgtattgatgaagtccgagatgaccgaatataccgtgctgacggaacgaagagac
atactcttgttgtccgcaagatgttactgctgcgccctgtctctttctccgcaatcgcct
ttgctgtggcatgatttagcatcttgttacttgatgcgactgcatctcgatccatcgatc
gatcacaagaatcttgccagcaaatgtctggctatagcgaaacacgctgttaaactttgc
ccctcgtcgtggttacattggaacttcttgggtatcgtttgcatgtcaccgtacattaaa
aactacgcattagcccagcacgcgttcgtgatggcgatcgacagggaattgaacaactcc
atggtttggtctaatttgggaacgttgtatctgcacgtaggaaactggtacaaagcaaac
gaagcgtacaaccaagcgcaacgagcagatccggcgtacatgaatagttggatcggtcaa
gcgttactagccgaaatgatgagcagccaagaagcgttagatttgttcaggcactctacg
cagctgggatatcatcctcaggcggcggtaggatacgctcattcggtgcttaccgtgctt
aaaaattctaccatcgaaagggactctttgcataagtatataatagaaaacatgcacgcc
gtagtcgttgcctcggacgtgatgaattggtacgtggagcaacacccggacgattgttac
gcgcgaaacgcgtacggattgttgttggagagacagaaactccgaagatcggtggcagaa
caatttgccgcggctttgccgttgtgcacggacgaggaaaagaatttagtatgtataaat
ttggcgcgcgtgttgatgcaactcgacaatcccgtgaaggctgtgaaattatgccgatcc
gttaaaagaattagctacaattcccaatgccatttggcgttggcgttattcaaggcaggc
gaatacgaggaatcgtacaacgcgtacgaaacggcgctcaatttgcacgagaataccgac
atagaaaaagcttacacgttgtgcgcgatggcggcgataacgtacattttccaaggtgta
cacgataccaaaacgttgctatttcaatgtattcaaatacaaccgccggttataacgggt
ttcttggcagccgcttctttgggaatattgcacgtggatgtgaatttagctgtgctggta
atgaacgaactaaaaccttatgcggatcacccaacgcacggtccacacgttgcaaatttg
tcggcgtattctcatttgatctcgaacaatattaaaagtgctatcgccacactctccaaa
gcaatttttaagcatcccgacgacgcgagatattggatacatttactcagaataatatcc
cagatagatttggcaacatttaacagatgcgcgcagaaagcattgtttctgagcagaaat
actgtaaacacagacgttatgcagttggcttgtgtatcatttttcaagtatttcgcgcaa
tcttcgacaccagccagtattaaattcatacagaaactcttatttgcatatcctggtaat
attgaaaatttgattacatacgtgacgccatttttacaaatgtcaaaggaattgaaacat
agtgaaattactgtgtag
DBGET
integrated database retrieval system
