Colletes gigas: 122397107
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Entry
122397107 CDS
T07492
Name
(RefSeq) ubiquitin conjugation factor E4 B
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
cgig
Colletes gigas
Pathway
cgig04120
Ubiquitin mediated proteolysis
cgig04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
cgig00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122397107
04120 Ubiquitin mediated proteolysis
122397107
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cgig04121
]
122397107
Enzymes [BR:
cgig01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122397107
Ubiquitin system [BR:
cgig04121
]
Ubiquitin ligases (E3)
U-box type E3
122397107
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
122397107
NCBI-ProteinID:
XP_043251921
LinkDB
All DBs
Position
Unknown
AA seq
1102 aa
AA seq
DB search
MSELSQEEVRRRRMVRLAGLDSISSTTTLNHNTGPVSPSTPGPSRAFTGQIISPSKQQQF
QIPEMPMEVEENSDKQCSSGVDVDSGIENMEVEESDRKDSKSRSRTTSSSTEVTIEQIHS
VISRVLCISWKEPTEGTVFLPQTASYTSTQKLVDAAELINQALMEILCMLTKGDNPLKQI
YVEASSVREDSPNRQACLSLSPFALFCRCSTCCETSHPKSLIYLLDCYSRVAVEERNHPK
KSSTPPLSDVLATLRAQCVQYSCLVLQGLIGINQFSTAHHLSMPPLLYPILSQSLPRGYL
HELVARTHTNLAVFNKIFTPLLQGLYLSMQQVSLDGNKHRMPIGALEELIEIRCGPTSNI
RPICRLITHQIQFLPDIMTSAAGRELTITSYLGPFLSVSIFNEDSAVVEEFFSDDNPIVN
KVMNVTLQQELERTRTSLHKMLHAILANSNCRDAMLTYLAMLLCHNEKRAQIQTEEFSLA
GDGFMLNLLSVLQMLSVKIKLDTVDPLYPFHPTSLVEIKNETRLKLTSHEVTEWLKHLER
THKWVEPKFPTQCWFLTLHCHHIALLPALQKYQRKLRNLRDIQKMLDELQATEPQWKDTP
FAGRNKALIKRCKEQLKQLSKSKSCSDAGLIDPTLLRRCLHFYISVAEVLLSLLTQTPPG
NPPPELPLLQEVPQKFTALPEWYVEDIAEFLLFTLQFSPGVVTNNMDNSLITWLLVVVCT
PHCIRNPYLIAKIIEVLFVINPSVQGQTESLHDQVMAHPISKTLLASYLMKFYTDVETTG
SSSEFYDKFSIRYHISLILKSMWDSPVHRESIINESNNGKQFVKFINMLMNDTTFLLDES
LETLKRIHEIQELMSDLRAWAALSNEQQHSRMRQLAADERQARSYLTLAKETVAMFHYLT
VDITEPFLRPELVGRLCAMLNFNLQQLCGPKCKNLKVREPQKYGWEPRALLSQLVDIYLH
LDCDNFAAALASDERSFCKELFTDAANRLERSVIKTTTEIERFIVLAERAAVIARDNRAR
DEDYGDAPEEFRDPLMDTLMEEPVKLPSGIVMDKAVIIRHLLNSATDPFSRQPLSEDMLT
PMLDLKERISVWKQQKKKSTNI
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagttaagccaagaggaagtaagaagaaggcgaatggtccgtttagcaggcctg
gatagcattagttctacgactactttaaatcataatactggtccagtttctccaagtacg
ccaggcccgtcgagagcatttacaggacaaataatatctccgtcgaagcagcagcaattt
caaattcctgaaatgccgatggaagtagaggaaaatagcgataaacaatgttcttctgga
gtggatgtagactcgggaattgaaaatatggaagttgaagagtccgatagaaaggattca
aaatccagatcacgtaccacaagttctagcacagaggtaactatagagcaaatacattct
gtgatctcgcgtgtattatgcatatcatggaaagaaccaacagagggtaccgtattccta
ccgcaaaccgcgtcgtatacgtctacacaaaagcttgttgacgcagcagagcttattaat
caagcgttaatggaaattctgtgcatgttaacaaaaggtgataatcctttaaaacaaatt
tatgtagaggcgtcatcggttcgggaggatagtcctaataggcaagcgtgtctttcattg
agcccattcgcgttattttgccgttgtagtacttgttgtgaaacgtcgcatccaaagagt
ctcatctatttactagactgttattcaagagtcgccgttgaagaacgaaatcacccaaag
aaatcaagtacaccgccactctccgatgtactggctacgctaagagcacagtgtgttcaa
tactcctgtcttgtactccaaggcctgatcggtattaatcagttctcgacggcgcatcat
ttgtctatgccacctcttctctatccaatactctcgcagagtttacctcggggctattta
cacgaactagtggcaagaacacacacgaatctagcagtattcaataaaatttttacaccg
ttgttgcaaggtctgtatctttcgatgcaacaagtcagtttggacggaaacaagcatcga
atgccgatcggagcattggaagagttaatagaaatccgttgcggaccgacgagtaatata
cggccgatttgccgtttaattactcatcaaattcaatttttgcctgacattatgacgtca
gcggctggtagagaacttacgataacgtcttacctgggtcctttcctgtcggtctcgatt
ttcaacgaagattcagccgtggttgaagaatttttcagcgacgacaacccgatcgtcaat
aaggtgatgaatgtaacgttgcagcaagaattggagaggaccagaacgtcgcttcacaaa
atgttacacgccatacttgcgaatagcaattgtcgcgatgctatgttaacgtacttggcg
atgttgctgtgtcataatgaaaaacgtgcccaaatacagacggaagagttctctcttgcc
ggagacggatttatgttaaatctgttatcggtattgcaaatgctttctgtgaaaatcaaa
ctggacaccgtcgatcccttgtacccgtttcatccaacaagtttagtggaaattaaaaac
gagacaaggctaaaacttacgtcccacgaagtcaccgaatggctaaaacatttggaaagg
acgcacaagtgggtcgagccaaagtttccgactcaatgttggtttcttaccttacattgt
caccatatagcgttattaccagcgttacaaaaataccagagaaaactaaggaatttgcgt
gacatccagaaaatgctcgacgagttgcaagctaccgaaccacagtggaaagatacacct
ttcgctggacgcaataaggcattaataaaacgttgtaaagaacaattgaaacaactcagt
aaatccaaatcgtgctcggatgccggattaattgatcctacattattgagaaggtgcttg
catttttatatttccgtagcggaggttctgttaagtttattaactcaaaccccgccagga
aatccacctccagaacttcctttgctgcaagaagttccacaaaaatttacagcgctacca
gaatggtacgtcgaagatattgcggaatttttattatttacacttcaatttagtcccggc
gtggtaacaaataacatggataattcactcattacatggttgcttgttgtagtatgtacc
ccacattgtatacgaaatccatatttaatagcaaaaattattgaagtgctgtttgtgata
aatccgagtgttcagggacaaactgaatcgctacatgaccaagtaatggcacatcctata
tccaaaacgctattagcatcgtaccttatgaagttctatacagacgttgaaacgactggc
tctagttccgaattttacgataaattttctattcgttatcatattagtttaatattgaag
tctatgtgggacagcccagtacaccgggagtcgatcattaatgagagcaataacggcaag
caatttgtgaagttcattaacatgttaatgaacgacactacctttttactcgatgaaagt
ttggaaacgttgaagcgtatccatgaaatacaagaactgatgtctgatcttagagcgtgg
gcagcgctatcaaatgaacagcaacattcgcggatgagacaattagcagcggacgaaaga
caagccagatcgtatctaactctggctaaggagaccgttgctatgtttcattatttgaca
gttgatatcacggaaccgtttctacgaccagagttggtaggaagattgtgtgccatgtta
aactttaacctacaacagttgtgcggacctaaatgcaaaaatttaaaagtacgagaacca
caaaagtatggatgggaaccaagagctttactcagtcaattggtcgacatatatttacat
cttgactgcgataattttgcggccgctttggccagtgatgaacgctcattttgcaaggaa
ttatttacggacgcagcgaataggctagaaaggtcggtaatcaagactacgacagaaatt
gaaagatttatagtactagcggaacgtgctgcggtcatcgcaagagataatcgtgctcgt
gacgaagactatggcgacgcaccagaggaatttcgagatccacttatggacactctcatg
gaggaacctgttaaacttccgtctggtatagttatggataaagcagtcattattagacat
ctccttaatagtgccacagatcctttcagtagacaacctctcagtgaagatatgcttaca
ccgatgctcgatttaaaagaaaggatatcggtgtggaaacaacaaaagaaaaaatctaca
aacatataa
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integrated database retrieval system
