Colletes gigas: 122399998
Help
Entry
122399998 CDS
T07492
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
cgig
Colletes gigas
Pathway
cgig03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cgig00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
122399998
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cgig03041
]
122399998
Spliceosome [BR:
cgig03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
122399998
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
PRP4
ANAPC4_WD40
NBCH_WD40
Ge1_WD40
Nup160
Tlp
WD40_like
Motif
Other DBs
NCBI-GeneID:
122399998
NCBI-ProteinID:
XP_043257090
LinkDB
All DBs
Position
Unknown
AA seq
525 aa
AA seq
DB search
MSDDEDLVYVKKQKTVHYGSLEEAERARLAAAAESSEEEKDSTNLGDNVNVAATLGNVHI
SNEYMELEDEMSKDRQALLEEFERRKKARQINVSTDDSEVKKNLRQLGEPICLFGEGPAD
RRTRLRELLASLGEDAIKKKHDEDEKPSHAIERDTEATWYHEGPESLQIARSWIATYSLP
RAKARLEKARQDLELPTATRTARRQELLKKLQALTIYCSQIGDTRPISFCQFSPNSKMFA
TASWSGLCKIWSVPDCTLLRTLKGHTCNVGCIVFHPKATITEEVIGEKSGQTCILASCAA
DGTVKLWSGGSGEEPLAEVEGHEPHRVSRLAFHPSGRFLGTCCHDASWRLWDLEQQAEVL
HQEGHARAVHCISFQCDGSVSATGGHDSFGRVWDLRTGRCIMFMEGHLKSIFGIDFSPNG
FHIATASEDNTCKIWDLRKRSCVYTIPAHTNLLSDVKYQRLEGQYLVTASYDSTAKIWSN
KTWQPLKTLPGHDGKVMSVDISPDHKFIGTSSYDRTFKLWAPENI
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacgacgaggacttggtttacgtcaagaagcagaaaactgtgcattatggatcg
ctggaggaggcagaacgtgcaaggctggcagcagctgcggagtcatcggaagaggagaaa
gactccacaaatttgggagacaatgtcaacgttgctgccactctggggaatgtacacata
tcgaacgagtacatggagctcgaagatgagatgtccaaagacagacaagctctcttagaa
gaattcgaacgcagaaagaaagctcgccaaattaacgtatctactgatgattctgaagta
aaaaagaatttgagacaattaggagaacctatttgtctgttcggcgaaggacccgcggac
agaagaacaagattgagagagttgctagctagtctgggggaagatgcgataaaaaagaag
cacgacgaagatgagaaaccttctcatgctatagaaagagatacggaagcaacttggtat
cacgaaggaccagaatccctccaaatagctcgttcttggattgcaacgtactcgttacct
agagcaaaggctagattggaaaaagcgagacaggatctggagctaccaacagccactcgt
acagcacgtcgccaagaactcctgaagaaattgcaagcgctaacgatttactgttctcaa
atcggcgatacccgaccaatttccttctgtcaatttagtccgaattccaagatgtttgct
acagcttcatggtcaggcttgtgcaaaatatggtctgtacctgactgtactttgttgcga
acgcttaaaggacatacttgtaatgttggctgcattgtttttcatccaaaagctactatt
accgaagaggtgataggggagaaatcaggacagacttgtatattggcatcttgtgctgca
gatgggacagtgaaattgtggagcggtggatctggggaagaaccgctagctgaagtcgag
ggccacgagccgcatagagtttcgaggttagcttttcatccgtccggtcgatttctcggg
acttgttgccacgatgcgtcttggaggctttgggacttggaacagcaagcagaggttctt
catcaagagggtcacgcgagagctgtgcactgcatcagctttcagtgcgacggtagcgtg
agcgccacaggtggtcacgactcctttggcagagtgtgggatcttcgcacagggaggtgc
attatgttcatggagggtcatttaaagtctatcttcggtatcgatttctcccccaacggg
tttcacatagccacagccagcgaggacaacacgtgcaagatatgggacttgcgaaagagg
tcttgcgtgtacacgatacccgcgcacacgaatttactgtcggacgtgaagtatcagagg
ctcgagggacagtatctggtcaccgcctcgtacgacagcactgccaaaatatggtcgaac
aaaacctggcaacccttaaaaacgttacctggtcacgacgggaaggtcatgtccgtcgat
atttccccggaccataaattcatcgggactagttcttacgacagaacttttaaactatgg
gctcccgaaaatatataa
DBGET
integrated database retrieval system
